RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 ZFYVE21Q9BQ24 234 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 ACTR10Q9NZ32 417 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 FBXO10Q9UK96 956 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 MYADML2A6NDP7 307 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 B2RBV5 119 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 B3GALT2O43825 422 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 GNAT1P11488 350 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 MC4RP32245 332 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 PPP2R2AP63151 447 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 ST5P78524 1137 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 FOXF2Q12947 444 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 SLC10A6Q3KNW5 377 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 KANK2Q63ZY3 851 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 TMEM200BQ69YZ2 307 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 LBX2Q6XYB7 198 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 Q6YL49 198 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 ZNF662Q6ZS27 426 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 LRRC55Q6ZSA7 311 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 HTR3DQ70Z44 454 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 CXXC5Q7LFL8 322 aaKnown RBP3.3□□□□□ -1.88
PTPN12-212ENST00000494248 VPS37DQ86XT2 251 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 NT5DC4Q86YG4 428 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 BCL6BQ8N143 479 aaPredicted RBP3.3□□□□□ -1.88
PTPN12-212ENST00000494248 PGBD4Q96DM1 585 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 PHF20Q9BVI0 1012 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 AMNQ9BXJ7 453 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 CHMP4AQ9BY43 222 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 FAM184BQ9ULE4 1060 aa3.3□□□□□ -1.88
PTPN12-212ENST00000494248 A0A0G2JNJ9 132 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 A0A1W2PRX2 142 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 SMAD7O15105 426 aaKnown RBP3.29□□□□□ -1.88
PTPN12-212ENST00000494248 DLX3O60479 287 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 MPIG6BO95866 241 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 TYRP1P17643 537 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 ADAM8P78325 824 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 ATP2C1P98194 919 aaPredicted RBP3.29□□□□□ -1.88
PTPN12-212ENST00000494248 MAPK7Q13164 816 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 ELAVL1Q15717 326 aaKnown RBP3.29□□□□□ -1.88
PTPN12-212ENST00000494248 TMCO4Q5TGY1 634 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 LRSAM1Q6UWE0 723 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 EEPD1Q7L9B9 569 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 OTOP2Q7RTS6 562 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 CXorf67Q86X51 503 aaPredicted RBP3.29□□□□□ -1.88
PTPN12-212ENST00000494248 RTKN2Q8IZC4 609 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 Q8N9P0 234 aaPredicted RBP3.29□□□□□ -1.88
PTPN12-212ENST00000494248 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.29□□□□□ -1.88
PTPN12-212ENST00000494248 DCAF4Q8WV16 495 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 ANKS1AQ92625 1134 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 RABGGTAQ92696 567 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 GPHA2Q96T91 129 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 MNTQ99583 582 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 ALG13Q9NP73 1137 aaKnown RBP3.29□□□□□ -1.88
PTPN12-212ENST00000494248 INCENPQ9NQS7 918 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 GALNT8Q9NY28 637 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 BTBD7Q9P203 1132 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 Q9UFV3 132 aa3.29□□□□□ -1.88
PTPN12-212ENST00000494248 CENPVL1A0A0U1RR11 272 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 A0A1W2PQU0 124 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 AGRPO00253 132 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 PTGS1P23219 599 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 MEOX1P50221 254 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 ADCY7P51828 1080 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 GPR85P60893 370 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 HDLBPQ00341 1268 aaKnown RBP3.28□□□□□ -1.88
PTPN12-212ENST00000494248 ADAM15Q13444 863 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 BTBD8Q5XKL5 378 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 LARP1BQ659C4 914 aaKnown RBP3.28□□□□□ -1.88
PTPN12-212ENST00000494248 KCNV1Q6PIU1 500 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 KCNT2Q6UVM3 1135 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 GSPT2Q8IYD1 628 aaKnown RBP3.28□□□□□ -1.88
PTPN12-212ENST00000494248 SYNE4Q8N205 404 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 ZNF366Q8N895 744 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 IER2Q9BTL4 223 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 RSAD1Q9HA92 442 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 ARHGAP28Q9P2N2 729 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 INPP5FQ9Y2H2 1132 aa3.28□□□□□ -1.88
PTPN12-212ENST00000494248 CTDP1Q9Y5B0 961 aaPredicted RBP3.28□□□□□ -1.88
PTPN12-212ENST00000494248 POLR2AP24928 1970 aaKnown RBP3.28□□□□□ -1.88
PTPN12-212ENST00000494248 SETD1BQ9UPS6 1966 aaKnown RBP3.27□□□□□ -1.89
PTPN12-212ENST00000494248 DNAJC9-AS1A6NH13 148 aa3.27□□□□□ -1.89
PTPN12-212ENST00000494248 LPXNO60711 386 aa3.27□□□□□ -1.89
PTPN12-212ENST00000494248 DDAH1O94760 285 aa3.27□□□□□ -1.89
PTPN12-212ENST00000494248 PTPN1P18031 435 aaKnown RBP3.27□□□□□ -1.89
PTPN12-212ENST00000494248 ATF4P18848 351 aaPredicted RBP3.27□□□□□ -1.89
PTPN12-212ENST00000494248 ZEB1P37275 1124 aaPredicted RBP3.27□□□□□ -1.89
PTPN12-212ENST00000494248 MOGSQ13724 837 aa3.27□□□□□ -1.89
PTPN12-212ENST00000494248 FXNQ16595 210 aa3.27□□□□□ -1.89
PTPN12-212ENST00000494248 STYK1Q6J9G0 422 aa3.27□□□□□ -1.89
PTPN12-212ENST00000494248 USP53Q70EK8 1073 aa3.27□□□□□ -1.89
PTPN12-212ENST00000494248 ELOA2Q8IYF1 753 aaPredicted RBP3.27□□□□□ -1.89
PTPN12-212ENST00000494248 LRFN3Q9BTN0 628 aa3.27□□□□□ -1.89
PTPN12-212ENST00000494248 TGIF2Q9GZN2 237 aa3.27□□□□□ -1.89
PTPN12-212ENST00000494248 ZNF768Q9H5H4 540 aaKnown RBP3.27□□□□□ -1.89
PTPN12-212ENST00000494248 PRKAG3Q9UGI9 489 aa3.27□□□□□ -1.89
PTPN12-212ENST00000494248 SRPK3Q9UPE1 567 aa3.27□□□□□ -1.89
PTPN12-212ENST00000494248 FAM47E-STBD1D6RA91 191 aa3.26□□□□□ -1.89
PTPN12-212ENST00000494248 E9PSI1 815 aa3.26□□□□□ -1.89
PTPN12-212ENST00000494248 WNT9AO14904 365 aa3.26□□□□□ -1.89
PTPN12-212ENST00000494248 SOD2P04179 222 aa3.26□□□□□ -1.89
PTPN12-212ENST00000494248 FGFR1P11362 822 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms