RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 RBPJLQ9UBG7 517 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 Q9UFV3 132 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 ZDHHC9Q9Y397 364 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 PRAMEF22A3QJZ6 481 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 K7ESM1 405 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 DVL2O14641 736 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 NRP1O14786 923 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 KNG1P01042 644 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 CELA3BP08861 270 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 BPIP17213 487 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 SESN3P58005 492 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 ALDH6A1Q02252 535 aaKnown RBP3.26□□□□□ -1.89
LMNB1-207ENST00000494185 HHEXQ03014 270 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 LRRC32Q14392 662 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 PTPROQ16827 1216 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 ZNF827Q17R98 1081 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 ATP13A4Q4VNC1 1196 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 CCDC178Q5BJE1 867 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 CATSPEREQ5SY80 951 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 CREB3L3Q68CJ9 461 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 SLFN13Q68D06 897 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 LCNL1Q6ZST4 164 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 Q6ZUG5 572 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 TTLL10Q6ZVT0 673 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 STRA8Q7Z7C7 330 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 KBTBD2Q8IY47 623 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 CHST13Q8NET6 341 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 ATL2Q8NHH9 583 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 CDK5RAP1Q96SZ6 601 aaKnown RBP3.26□□□□□ -1.89
LMNB1-207ENST00000494185 ELF4Q99607 663 aaPredicted RBP3.26□□□□□ -1.89
LMNB1-207ENST00000494185 SYT3Q9BQG1 590 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 SEMA4AQ9H3S1 761 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 SEC61A2Q9H9S3 476 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 SPTLC3Q9NUV7 552 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 SPATA6Q9NWH7 488 aaPredicted RBP3.26□□□□□ -1.89
LMNB1-207ENST00000494185 H2AFY2Q9P0M6 372 aaPredicted RBP3.26□□□□□ -1.89
LMNB1-207ENST00000494185 BTBD7Q9P203 1132 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 ADAM29Q9UKF5 820 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 FAM184BQ9ULE4 1060 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 ZBTB21Q9ULJ3 1066 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 COL4A3BPQ9Y5P4 624 aa3.26□□□□□ -1.89
LMNB1-207ENST00000494185 NPEPPSL1A6NEC2 478 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 RASSF10A6NK89 507 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 GOLGA6L22H0YM25 854 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 NEMP1O14524 444 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 NOBOXO60393 691 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 PLATP00750 562 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 PRLP01236 227 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 MTHFD2P13995 350 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 PTX3P26022 381 aaPredicted RBP3.25□□□□□ -1.89
LMNB1-207ENST00000494185 MC4RP32245 332 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 CNR2P34972 360 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 RPS19P39019 145 aaKnown RBP3.25□□□□□ -1.89
LMNB1-207ENST00000494185 GPR15P49685 360 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 PHC1P78364 1004 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 SLC6A3Q01959 620 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 STILQ15468 1287 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 DDB1Q16531 1140 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 VMACQ2NL98 169 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 PRR31Q5SQ13 230 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 KLHDC10Q6PID8 442 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 SPOCD1Q6ZMY3 1216 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 FRMD7Q6ZUT3 714 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 BMP8AQ7Z5Y6 402 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 CIR1Q86X95 450 aaPredicted RBP3.25□□□□□ -1.89
LMNB1-207ENST00000494185 CILP2Q8IUL8 1156 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 CXorf38Q8TB03 319 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 WDR66Q8TBY9 1149 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 ZCCHC14Q8WYQ9 949 aaKnown RBP3.25□□□□□ -1.89
LMNB1-207ENST00000494185 GCDHQ92947 438 aaPredicted RBP3.25□□□□□ -1.89
LMNB1-207ENST00000494185 RELTQ969Z4 430 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 AJUBAQ96IF1 538 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 ACAP3Q96P50 834 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 KRTAP17-1Q9BYP8 105 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 EMC7Q9NPA0 242 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 UCKL1Q9NWZ5 548 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 PUF60Q9UHX1 559 aaKnown RBP3.25□□□□□ -1.89
LMNB1-207ENST00000494185 WASF3Q9UPY6 502 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 TCAF1Q9Y4C2 921 aa3.25□□□□□ -1.89
LMNB1-207ENST00000494185 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.24□□□□□ -1.89
LMNB1-207ENST00000494185 CYP27B1O15528 508 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 TGM5O43548 720 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 FSBPO95073 299 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 APOL3O95236 402 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 EYA4O95677 639 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 MPIG6BO95866 241 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 ID4P47928 161 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 KCNQ1P51787 676 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 PPP2CBP62714 309 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 PPP2CAP67775 309 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 IL13RA1P78552 427 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 SMAD3P84022 425 aaKnown RBP3.24□□□□□ -1.89
LMNB1-207ENST00000494185 TMPRSS15P98073 1019 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 AMPD3Q01432 767 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 PLP2Q04941 152 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 DLX2Q07687 328 aaPredicted RBP3.24□□□□□ -1.89
LMNB1-207ENST00000494185 ADCY2Q08462 1091 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 TOP3AQ13472 1001 aaPredicted RBP3.24□□□□□ -1.89
LMNB1-207ENST00000494185 MOGSQ13724 837 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 STAT4Q14765 748 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms