RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 P3H4Q92791 437 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.53□□□□□ -0.41e-6■□□□□ 8.5
RFC4-214ENST00000494047 TIPINQ9BVW5 301 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 NLRC4Q9NPP4 1024 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 RNF216Q9NWF9 866 aaPredicted RBP12.53□□□□□ -0.4
RFC4-214ENST00000494047 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.53□□□□□ -0.4
RFC4-214ENST00000494047 SERPINA10Q9UK55 444 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 DUSP10Q9Y6W6 482 aa12.53□□□□□ -0.4
RFC4-214ENST00000494047 ZNF646O15015 1829 aaPredicted RBP12.52□□□□□ -0.4
RFC4-214ENST00000494047 CNTNAP1P78357 1384 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 NCANO14594 1321 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 POTEB3A0JP26 581 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 AGPSO00116 658 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 SART1O43290 800 aaKnown RBP12.52□□□□□ -0.41
RFC4-214ENST00000494047 ENTPD3O75355 529 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 MAPTP10636 758 aaKnown RBP12.52□□□□□ -0.41
RFC4-214ENST00000494047 HADHBP55084 474 aaKnown RBP12.52□□□□□ -0.41
RFC4-214ENST00000494047 ICA1Q05084 483 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 GIT2Q14161 759 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 UBE2SQ16763 222 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 DEFB115Q30KQ5 88 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 TATDN1Q6P1N9 297 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 ALKBH5Q6P6C2 394 aaKnown RBP12.52□□□□□ -0.41
RFC4-214ENST00000494047 POTEBQ6S5H4 581 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 KCNK18Q7Z418 384 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 TAX1BP1Q86VP1 789 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 RHOT2Q8IXI1 618 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 RASGEF1CQ8N431 466 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 SAMD3Q8N6K7 520 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 SMCR8Q8TEV9 937 aaPredicted RBP12.52□□□□□ -0.41
RFC4-214ENST00000494047 HHIPL1Q96JK4 782 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 IWS1Q96ST2 819 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 RBM12Q9NTZ6 932 aaKnown RBP12.52□□□□□ -0.41
RFC4-214ENST00000494047 PARP2Q9UGN5 583 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 DMGDHQ9UI17 866 aaKnown RBP12.52□□□□□ -0.41
RFC4-214ENST00000494047 HERC5Q9UII4 1024 aaKnown RBP12.52□□□□□ -0.41
RFC4-214ENST00000494047 RASAL2Q9UJF2 1139 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 FRMD4BQ9Y2L6 1034 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 PCDHB13Q9Y5F0 798 aa12.52□□□□□ -0.41
RFC4-214ENST00000494047 MIF4GDA9UHW6 222 aaKnown RBP12.51□□□□□ -0.41
RFC4-214ENST00000494047 USP17L10C9JJH3 530 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 GCOM1H8Y6P7 765 aaPredicted RBP12.51□□□□□ -0.41
RFC4-214ENST00000494047 MAPK13O15264 365 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 TLR2O60603 784 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 PLA2G6O60733 806 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 FAM13AO94988 1023 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 GGPS1O95749 300 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 NR3C1P04150 777 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 MYZAPP0CAP1 466 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 MYBP10242 640 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 KLRC1P26715 233 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 ABCD1P33897 745 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 IRAK1P51617 712 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 SPIRE1Q08AE8 756 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 TCEAL1Q15170 157 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 TTC31Q49AM3 519 aaPredicted RBP12.51□□□□□ -0.41
RFC4-214ENST00000494047 SYDE2Q5VT97 1194 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 SMYD5Q6GMV2 418 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 CDC42EP5Q6NZY7 148 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 PEX26Q7Z412 305 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 SLFN11Q7Z7L1 901 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 SLC9A9Q8IVB4 645 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 IQCKQ8N0W5 287 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 FAM133AQ8N9E0 248 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 MTMR14Q8NCE2 650 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 ATP6V1G3Q96LB4 118 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 DRC1Q96MC2 740 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 GLIS2Q9BZE0 524 aaPredicted RBP12.51□□□□□ -0.41
RFC4-214ENST00000494047 STMN4Q9H169 189 aaPredicted RBP12.51□□□□□ -0.41
RFC4-214ENST00000494047 CARD9Q9H257 536 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 CPVLQ9H3G5 476 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 CNOT10Q9H9A5 744 aaKnown RBP12.51□□□□□ -0.41
RFC4-214ENST00000494047 RSPH14Q9UHP6 348 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 NAGPAQ9UK23 515 aa12.51□□□□□ -0.41
RFC4-214ENST00000494047 ABT1Q9ULW3 272 aaKnown RBP12.51□□□□□ -0.41
RFC4-214ENST00000494047 FRMPD4Q14CM0 1322 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 SYNGAP1Q96PV0 1343 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 A0A087X0T9 212 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 E9PMD0 336 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 MEIS2O14770 477 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 BUB1O43683 1085 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 EDIL3O43854 480 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 PPP1R11O60927 126 aaPredicted RBP12.5□□□□□ -0.41
RFC4-214ENST00000494047 CELF2O95319 508 aaKnown RBP12.5□□□□□ -0.41
RFC4-214ENST00000494047 EGFRP00533 1210 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 TMEM253P0C7T8 217 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 FAM228BP0C875 321 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 BCRP11274 1271 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 ZNF76P36508 570 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 ECE1P42892 770 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 CRKP46108 304 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 GYS2P54840 703 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 JAM2P57087 298 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 GUCY2DQ02846 1103 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 ENPEPQ07075 957 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 PPP2R5CQ13362 524 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 DHX34Q14147 1143 aaKnown RBP12.5□□□□□ -0.41
RFC4-214ENST00000494047 PLCB4Q15147 1175 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 LRRC41Q15345 812 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 AGBL2Q5U5Z8 902 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms