RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 PSMC5P62195 406 aa11.68□□□□□ -0.54
TRAPPC12-222ENST00000493792 NHLH1Q02575 133 aa11.68□□□□□ -0.54
TRAPPC12-222ENST00000493792 TMEM62Q0P6H9 643 aa11.68□□□□□ -0.54
TRAPPC12-222ENST00000493792 CUL4AQ13619 759 aa11.68□□□□□ -0.54
TRAPPC12-222ENST00000493792 LEXMQ3ZCV2 418 aa11.68□□□□□ -0.54
TRAPPC12-222ENST00000493792 MTERF2Q49AM1 385 aa11.68□□□□□ -0.54
TRAPPC12-222ENST00000493792 SNX27Q96L92 541 aa11.68□□□□□ -0.54
TRAPPC12-222ENST00000493792 PPP1R16BQ96T49 567 aa11.68□□□□□ -0.54
TRAPPC12-222ENST00000493792 VAV3Q9UKW4 847 aa11.68□□□□□ -0.54
TRAPPC12-222ENST00000493792 CEP131Q9UPN4 1083 aa11.68□□□□□ -0.54
TRAPPC12-222ENST00000493792 GINS2Q9Y248 185 aa11.68□□□□□ -0.54
TRAPPC12-222ENST00000493792 MBLAC1A4D2B0 266 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 DKC1O60832 514 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 P4HBP07237 508 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 OR52Z1P0C646 297 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 PDCP20941 246 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 QARSP47897 775 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 KCNJ6P48051 423 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 TRAPPC10P48553 1259 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 MRPS6P82932 125 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 CYP4A11Q02928 519 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 CTTNQ14247 550 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 EPHA7Q15375 998 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 XKR3Q5GH77 459 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 IER5Q5VY09 327 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 CNKSR3Q6P9H4 555 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 TRAF7Q6Q0C0 670 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 TMCO2Q7Z6W1 182 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 DYDC2Q96IM9 177 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 FBXL18Q96ME1 805 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 SH2D3AQ9BRG2 576 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 TMEM60Q9H2L4 133 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 UBE2ZQ9H832 354 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 RGL1Q9NZL6 768 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 PCDHA2Q9Y5H9 948 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 CDY2AQ9Y6F7 541 aa11.67□□□□□ -0.54
TRAPPC12-222ENST00000493792 SMIM35A0A1B0GVV1 85 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 TMEM150BA6NC51 233 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 MAGEB2O15479 319 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 RPLP2P05387 115 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 GHRP10912 638 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 IL9P15248 144 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 TECP42680 631 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 CLCN3P51790 818 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 TBC1D8BQ0IIM8 1120 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 IKBKEQ14164 716 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 MBTPS1Q14703 1052 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 TMEM266Q2M3C6 531 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 PLA2G4FQ68DD2 849 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 EFCAB12Q6NXP0 572 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 B3GNT9Q6UX72 402 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 FERMT3Q86UX7 667 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 TPH2Q8IWU9 490 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 SPRYD3Q8NCJ5 442 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 DBF4BQ8NFT6 615 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 GDPD5Q8WTR4 605 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 SEPT8Q92599 483 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 CCDC43Q96MW1 224 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 SCLT1Q96NL6 688 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 MAP7D2Q96T17 732 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 EIF2AK1Q9BQI3 630 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 LXNQ9BS40 222 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 AKT3Q9Y243 479 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 PCDHB6Q9Y5E3 794 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 TRPV2Q9Y5S1 764 aa11.66□□□□□ -0.54
TRAPPC12-222ENST00000493792 WDR81Q562E7 1941 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 ABHD14A-ACY1A0A1B0GW23 586 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 GRXCR2A6NFK2 248 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 POTEMA6NI47 508 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 ZBTB42B2RXF5 422 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 C22orf31O95567 290 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 CHRNA1P02708 482 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 ALADP13716 330 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 TMOD1P28289 359 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 ERVK-21P61565 698 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 WDR5P61964 334 aaKnown RBP11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 ORC2Q13416 577 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 TCTN1Q2MV58 587 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 RILPL1Q5EBL4 403 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 FAM26DQ5JW98 314 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 LRRC71Q8N4P6 559 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 SNX21Q969T3 373 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 INTS4Q96HW7 963 aaKnown RBP11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 CEP170P1Q96L14 293 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 MTMR9Q96QG7 549 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 IFIH1Q9BYX4 1025 aaKnown RBP11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 OSBPL7Q9BZF2 842 aa11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 BMP2KQ9NSY1 1161 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC12-222ENST00000493792 TET1Q8NFU7 2136 aa11.65□□□□□ -0.55
TRAPPC12-222ENST00000493792 EFCAB14O75071 495 aa11.64□□□□□ -0.55
TRAPPC12-222ENST00000493792 VTNP04004 478 aa11.64□□□□□ -0.55
TRAPPC12-222ENST00000493792 IBSPP21815 317 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC12-222ENST00000493792 KCNA5P22460 613 aa11.64□□□□□ -0.55
TRAPPC12-222ENST00000493792 DNM2P50570 870 aa11.64□□□□□ -0.55
TRAPPC12-222ENST00000493792 TOB1P50616 345 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC12-222ENST00000493792 NPEPPSP55786 919 aa11.64□□□□□ -0.55
TRAPPC12-222ENST00000493792 DEFB103AP81534 67 aa11.64□□□□□ -0.55
TRAPPC12-222ENST00000493792 SPIRE1Q08AE8 756 aa11.64□□□□□ -0.55
TRAPPC12-222ENST00000493792 MGAT3Q09327 533 aa11.64□□□□□ -0.55
TRAPPC12-222ENST00000493792 PTGDRQ13258 359 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms