RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 CAAP1Q9H8G2 361 aa6.18□□□□□ -1.42
ITGB1-216ENST00000493758 IFT57Q9NWB7 429 aa6.18□□□□□ -1.42
ITGB1-216ENST00000493758 PMS2P1A4D2B8 440 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 FOXD2O60548 495 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-216ENST00000493758 CLSTN1O94985 981 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 SLC9A1P19634 815 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 SOX5P35711 763 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 KPNA1P52294 538 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-216ENST00000493758 BCAR1P56945 870 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 PPP2CBP62714 309 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 PPP2CAP67775 309 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 SLC6A3Q01959 620 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 MYBPC3Q14896 1274 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 SLFN13Q68D06 897 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 KRT26Q7Z3Y9 468 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 BMP8AQ7Z5Y6 402 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 PASD1Q8IV76 773 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 NXPE1Q8N323 547 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 AFAP1L2Q8N4X5 818 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 C7orf31Q8N865 590 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 ZNF610Q8N9Z0 462 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 WDR48Q8TAF3 677 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 THG1LQ9NWX6 298 aaKnown RBP6.17□□□□□ -1.42
ITGB1-216ENST00000493758 KCMF1Q9P0J7 381 aa6.17□□□□□ -1.42
ITGB1-216ENST00000493758 H2AFY2Q9P0M6 372 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-216ENST00000493758 ZEB2O60315 1214 aa6.16□□□□□ -1.42
ITGB1-216ENST00000493758 ZNF888P0CJ79 500 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-216ENST00000493758 MASP1P48740 699 aa6.16□□□□□ -1.42
ITGB1-216ENST00000493758 TERF2Q15554 542 aa6.16□□□□□ -1.42
ITGB1-216ENST00000493758 AGBL4Q5VU57 503 aa6.16□□□□□ -1.42
ITGB1-216ENST00000493758 ARHGEF18Q6ZSZ5 1173 aa6.16□□□□□ -1.42
ITGB1-216ENST00000493758 OTOP2Q7RTS6 562 aa6.16□□□□□ -1.42
ITGB1-216ENST00000493758 FERMT3Q86UX7 667 aa6.16□□□□□ -1.42
ITGB1-216ENST00000493758 EMC7Q9NPA0 242 aa6.16□□□□□ -1.42
ITGB1-216ENST00000493758 TOMM22Q9NS69 142 aa6.16□□□□□ -1.42
ITGB1-216ENST00000493758 PPP4R1LQ9P1A2 415 aa6.16□□□□□ -1.42
ITGB1-216ENST00000493758 APOBEC2Q9Y235 224 aaKnown RBP6.16□□□□□ -1.42
ITGB1-216ENST00000493758 FKBP9O95302 570 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 CELA3BP08861 270 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 RGS3P49796 1198 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 SESN2P58004 480 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-216ENST00000493758 SART3Q15020 963 aaKnown RBP6.15□□□□□ -1.42
ITGB1-216ENST00000493758 ZNF568Q3ZCX4 644 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 KIAA1841Q6NSI8 718 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 FKBP9P1Q75LS8 142 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 GPR155Q7Z3F1 870 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 C11orf74Q86VG3 221 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 DNERQ8NFT8 737 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 CHAC2Q8WUX2 184 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 LPPQ93052 612 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 SAMD11Q96NU1 681 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 BDH2Q9BUT1 245 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 WNT8AQ9H1J5 351 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 OR10A2Q9H208 303 aa6.15□□□□□ -1.42
ITGB1-216ENST00000493758 NCANO14594 1321 aa6.15□□□□□ -1.43
ITGB1-216ENST00000493758 MAFGO15525 162 aa6.14□□□□□ -1.43
ITGB1-216ENST00000493758 ADCY8P40145 1251 aa6.14□□□□□ -1.43
ITGB1-216ENST00000493758 KCNQ1P51787 676 aa6.14□□□□□ -1.43
ITGB1-216ENST00000493758 IL2P60568 153 aa6.14□□□□□ -1.43
ITGB1-216ENST00000493758 HGFACQ04756 655 aa6.14□□□□□ -1.43
ITGB1-216ENST00000493758 DGKDQ16760 1214 aa6.14□□□□□ -1.43
ITGB1-216ENST00000493758 TIGD7Q6NT04 549 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-216ENST00000493758 LARP4Q71RC2 724 aaKnown RBP eCLIP6.14□□□□□ -1.43
ITGB1-216ENST00000493758 LEO1Q8WVC0 666 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-216ENST00000493758 RPGRQ92834 1020 aaKnown RBP6.14□□□□□ -1.43
ITGB1-216ENST00000493758 ERCC4Q92889 916 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-216ENST00000493758 NKD2Q969F2 451 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-216ENST00000493758 IFT22Q9H7X7 185 aa6.14□□□□□ -1.43
ITGB1-216ENST00000493758 JADE2Q9NQC1 790 aa6.14□□□□□ -1.43
ITGB1-216ENST00000493758 SPTLC3Q9NUV7 552 aa6.14□□□□□ -1.43
ITGB1-216ENST00000493758 DENND2AQ9ULE3 1009 aa6.14□□□□□ -1.43
ITGB1-216ENST00000493758 CADPSQ9ULU8 1353 aa6.14□□□□□ -1.43
ITGB1-216ENST00000493758 A0A0A6YYJ9 748 aa6.13□□□□□ -1.43
ITGB1-216ENST00000493758 K7ESM1 405 aa6.13□□□□□ -1.43
ITGB1-216ENST00000493758 ARHGAP6O43182 974 aa6.13□□□□□ -1.43
ITGB1-216ENST00000493758 BRINP1O60477 761 aa6.13□□□□□ -1.43
ITGB1-216ENST00000493758 LSP1P33241 339 aa6.13□□□□□ -1.43
ITGB1-216ENST00000493758 PRAMEF9Q5VWM5 478 aa6.13□□□□□ -1.43
ITGB1-216ENST00000493758 DDX46Q7L014 1031 aaKnown RBP6.13□□□□□ -1.43
ITGB1-216ENST00000493758 CFHR4Q92496 578 aa6.13□□□□□ -1.43
ITGB1-216ENST00000493758 TUBGCP5Q96RT8 1024 aa6.13□□□□□ -1.43
ITGB1-216ENST00000493758 TTC1Q99614 292 aa6.13□□□□□ -1.43
ITGB1-216ENST00000493758 POLR3BQ9NW08 1133 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-216ENST00000493758 PTPN22Q9Y2R2 807 aa6.13□□□□□ -1.43
ITGB1-216ENST00000493758 ZDHHC9Q9Y397 364 aa6.13□□□□□ -1.43
ITGB1-216ENST00000493758 CTDP1Q9Y5B0 961 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-216ENST00000493758 PATE3B3GLJ2 98 aa6.12□□□□□ -1.43
ITGB1-216ENST00000493758 B4GALT4O60513 344 aa6.12□□□□□ -1.43
ITGB1-216ENST00000493758 PRPF6O94906 941 aaKnown RBP6.12□□□□□ -1.43
ITGB1-216ENST00000493758 MRE11P49959 708 aa6.12□□□□□ -1.43
ITGB1-216ENST00000493758 MEOX1P50221 254 aa6.12□□□□□ -1.43
ITGB1-216ENST00000493758 ADCY2Q08462 1091 aa6.12□□□□□ -1.43
ITGB1-216ENST00000493758 DUSP8Q13202 625 aa6.12□□□□□ -1.43
ITGB1-216ENST00000493758 PCOLCEQ15113 449 aa6.12□□□□□ -1.43
ITGB1-216ENST00000493758 CCDC178Q5BJE1 867 aa6.12□□□□□ -1.43
ITGB1-216ENST00000493758 KLHDC10Q6PID8 442 aa6.12□□□□□ -1.43
ITGB1-216ENST00000493758 USP30Q70CQ3 517 aa6.12□□□□□ -1.43
ITGB1-216ENST00000493758 PPP1R14CQ8TAE6 165 aa6.12□□□□□ -1.43
ITGB1-216ENST00000493758 RTF1Q92541 710 aaKnown RBP6.12□□□□□ -1.43
ITGB1-216ENST00000493758 SLC5A5Q92911 643 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms