RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 TCP11Q8WWU5 503 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 PAWRQ96IZ0 340 aaKnown RBP12.85□□□□□ -0.35
LSM2-214ENST00000493387 DHX33Q9H6R0 707 aaKnown RBP12.85□□□□□ -0.35
LSM2-214ENST00000493387 ATP6V0A4Q9HBG4 840 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 KBTBD4Q9NVX7 518 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 SERTAD1Q9UHV2 236 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 TUBE1Q9UJT0 475 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 PCDHA2Q9Y5H9 948 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 A0A087WWV3 80 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 IGKV6-21A0A0C4DH24 114 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 TMEM150BA6NC51 233 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 CCDC85CA6NKD9 419 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 ACTN4O43707 911 aaKnown RBP12.84□□□□□ -0.35
LSM2-214ENST00000493387 MAFO75444 373 aaPredicted RBP12.84□□□□□ -0.35
LSM2-214ENST00000493387 C22orf31O95567 290 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 LIG1P18858 919 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 GUCY2CP25092 1073 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 CDC42EP1Q00587 391 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 SNW1Q13573 536 aaKnown RBP12.84□□□□□ -0.35
LSM2-214ENST00000493387 SNX17Q15036 470 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 PTGISQ16647 500 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 LONRF3Q496Y0 759 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 RINT1Q6NUQ1 792 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 C1orf186Q6ZWK4 172 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 RSPH3Q86UC2 560 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 GPBP1Q86WP2 473 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 NME8Q8N427 588 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 DIS3LQ8TF46 1054 aaKnown RBP12.84□□□□□ -0.35
LSM2-214ENST00000493387 TOX2Q96NM4 488 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 CEP89Q96ST8 783 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 MTRQ99707 1265 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 KCNG1Q9UIX4 513 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 NOD1Q9Y239 953 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 LOXHD1Q8IVV2 1947 aa12.84□□□□□ -0.35
LSM2-214ENST00000493387 SMIM35A0A1B0GVV1 85 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 DCDC2CA8MYV0 355 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 ASAP2O43150 1006 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 USO1O60763 962 aaKnown RBP12.83□□□□□ -0.36
LSM2-214ENST00000493387 NR1I2O75469 434 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 KRT18P05783 430 aaKnown RBP12.83□□□□□ -0.36
LSM2-214ENST00000493387 PTK7Q13308 1070 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 DHX8Q14562 1220 aaKnown RBP12.83□□□□□ -0.36
LSM2-214ENST00000493387 EMC2Q15006 297 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 SKOR2Q2VWA4 1001 aaPredicted RBP12.83□□□□□ -0.36
LSM2-214ENST00000493387 MARCH8Q5T0T0 291 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 IER5Q5VY09 327 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 GDF6Q6KF10 455 aaPredicted RBP12.83□□□□□ -0.36
LSM2-214ENST00000493387 EFCAB12Q6NXP0 572 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 CNNM4Q6P4Q7 775 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 ANKRD33Q7Z3H0 272 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 UBE2Q1Q7Z7E8 422 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 METTL13Q8N6R0 699 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 LRRC15Q8TF66 581 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 TRAPPC12Q8WVT3 735 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 KIFAP3Q92845 792 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 PAGE5Q96GU1 130 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 DRC1Q96MC2 740 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 MAP7D2Q96T17 732 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 C7orf25Q9BPX7 421 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 C17orf75Q9HAS0 396 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 PDLIM7Q9NR12 457 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 DACT1Q9NYF0 836 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 ODF2LQ9ULJ1 636 aa12.83□□□□□ -0.36
LSM2-214ENST00000493387 TREHO43280 583 aa12.82□□□□□ -0.36
LSM2-214ENST00000493387 GTPBP6O43824 516 aaPredicted RBP12.82□□□□□ -0.36
LSM2-214ENST00000493387 CAND2O75155 1236 aa12.82□□□□□ -0.36
LSM2-214ENST00000493387 CYP2C9P11712 490 aa12.82□□□□□ -0.36
LSM2-214ENST00000493387 ATN1P54259 1190 aaPredicted RBP12.82□□□□□ -0.36
LSM2-214ENST00000493387 MXD4Q14582 209 aaPredicted RBP12.82□□□□□ -0.36
LSM2-214ENST00000493387 SH3RF1Q7Z6J0 888 aa12.82□□□□□ -0.36
LSM2-214ENST00000493387 RPAINQ86UA6 219 aa12.82□□□□□ -0.36
LSM2-214ENST00000493387 SERINC5Q86VE9 423 aa12.82□□□□□ -0.36
LSM2-214ENST00000493387 FAM126BQ8IXS8 530 aa12.82□□□□□ -0.36
LSM2-214ENST00000493387 CCDC155Q8N6L0 562 aa12.82□□□□□ -0.36
LSM2-214ENST00000493387 PSPC1Q8WXF1 523 aaKnown RBP12.82□□□□□ -0.36
LSM2-214ENST00000493387 SH2D3AQ9BRG2 576 aa12.82□□□□□ -0.36
LSM2-214ENST00000493387 RUSC1Q9BVN2 902 aa12.82□□□□□ -0.36
LSM2-214ENST00000493387 SUGCTQ9HAC7 445 aa12.82□□□□□ -0.36
LSM2-214ENST00000493387 MYMKA6NI61 221 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 TBCAO75347 108 aaKnown RBP12.81□□□□□ -0.36
LSM2-214ENST00000493387 CD4P01730 458 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 AFMP43652 599 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 RTP1P59025 263 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 ZNF200P98182 395 aaPredicted RBP12.81□□□□□ -0.36
LSM2-214ENST00000493387 PPP2R5AQ15172 486 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 ARSHQ5FYA8 562 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 FAM102BQ5T8I3 360 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 CCDC65Q8IXS2 484 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 LINC01465Q8N7H1 131 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 DDX12PQ92771 950 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 CCDC47Q96A33 483 aaKnown RBP12.81□□□□□ -0.36
LSM2-214ENST00000493387 IFT74Q96LB3 600 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 HTATIP2Q9BUP3 242 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 TRIM9Q9C026 710 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 XPNPEP1Q9NQW7 623 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 SUCLA2Q9P2R7 463 aaPredicted RBP12.81□□□□□ -0.36
LSM2-214ENST00000493387 COL4A3BPQ9Y5P4 624 aa12.81□□□□□ -0.36
LSM2-214ENST00000493387 PVALEFA0A1B0GWK0 134 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 M0QZ92 97 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 B4GALT4O60513 344 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms