RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 ARP10275 920 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 ZSCAN20P17040 1043 aaPredicted RBP12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 RXRAP19793 462 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 ZNF76P36508 570 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 TECP42680 631 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 ADCY7P51828 1080 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 SETQ01105 290 aaPredicted RBP12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 MTMR3Q13615 1198 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 WWC2Q6AWC2 1192 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 CES5AQ6NT32 575 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 PDXDC2PQ6P474 469 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 SMAP1Q8IYB5 467 aaPredicted RBP12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 ABI1Q8IZP0 508 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 CCDC82Q8N4S0 544 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 VN1R2Q8NFZ6 395 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 CYP2W1Q8TAV3 490 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 TMEM40Q8WWA1 233 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 RIPOR3Q96MK2 946 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 ZNF558Q96NG5 402 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 PHOX2BQ99453 314 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 CWH43Q9H720 699 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 ENTPD7Q9NQZ7 604 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 TBC1D22BQ9NU19 505 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 TCEAL9Q9UHQ7 104 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 SORCS3Q9UPU3 1222 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 PCDHGC5Q9Y5F6 944 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 ZDBF2Q9HCK1 2354 aa12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 CNTNAP5Q8WYK1 1306 aa12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 C22orf31O95567 290 aa12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 CCNE2O96020 404 aa12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 TMOD1P28289 359 aa12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 DSC3Q14574 896 aa12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 SMC1AQ14683 1233 aaKnown RBP12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 PLPP4Q5VZY2 271 aa12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 ZNF746Q6NUN9 644 aaPredicted RBP12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 SYCE2Q6PIF2 218 aa12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 KCNT2Q6UVM3 1135 aa12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 FAM228AQ86W67 206 aa12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 MICU3Q86XE3 530 aa12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 CCDC60Q8IWA6 550 aaPredicted RBP12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 ATOH1Q92858 354 aaPredicted RBP12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 FAM167AQ96KS9 214 aa12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 MAP7D2Q96T17 732 aa12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 MRPL9Q9BYD2 267 aaKnown RBP12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 MAFBQ9Y5Q3 323 aaPredicted RBP12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 LOXHD1Q8IVV2 1947 aa12.49□□□□□ -0.41
SNRNP200-207ENST00000493271 hCG_1642624A0A1W2PR95 340 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 SMCO2A6NFE2 343 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 IPO5O00410 1097 aaKnown RBP12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 GALR2O43603 387 aaPredicted RBP12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 CYP3A4P08684 503 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 FGFR1P11362 822 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 IBSPP21815 317 aaPredicted RBP12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 MTHFRP42898 656 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 CLK2P49760 499 aaKnown RBP12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 RCAN1P53805 252 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 VCPP55072 806 aaKnown RBP12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 GIT2Q14161 759 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 KIZQ2M2Z5 673 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 RNF20Q5VTR2 975 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 SWSAP1Q6NVH7 229 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 APOA5Q6Q788 366 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 TMC7Q7Z402 723 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 PLA2G4DQ86XP0 818 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 CKAP2LQ8IYA6 745 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 OSMRQ99650 979 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 ADAM7Q9H2U9 754 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 BARHL2Q9NY43 387 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 SPG21Q9NZD8 308 aa12.48□□□□□ -0.41
SNRNP200-207ENST00000493271 ZBTB42B2RXF5 422 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 SLC27A2O14975 620 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 DHX15O43143 795 aaKnown RBP12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 GPR32O75388 356 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 EOMESO95936 686 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 PSAPP07602 524 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 EIF4BP23588 611 aaKnown RBP12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 RBM10P98175 930 aaKnown RBP12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 CDC42EP1Q00587 391 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 RTN1Q16799 776 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 METTL13Q8N6R0 699 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 MRPL43Q8N983 215 aaKnown RBP12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 KREMEN2Q8NCW0 462 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 CCDC12Q8WUD4 166 aaPredicted RBP12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 CASD1Q96PB1 797 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 LSG1Q9H089 658 aaKnown RBP12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 DZANK1Q9NVP4 752 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 DACT1Q9NYF0 836 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 STK39Q9UEW8 545 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 USTQ9Y2C2 406 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 PCDHA10Q9Y5I2 948 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 HCFC2Q9Y5Z7 792 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 CACNA1HO95180 2353 aa12.47□□□□□ -0.41
SNRNP200-207ENST00000493271 IGLV3-22A0A075B6J6 115 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 A0A0U1RQF3 1178 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 ESYT2A0FGR8 921 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 HIDE1A8MVS5 230 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 FAM86B1E9PN63 330 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 DDX39AO00148 427 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms