RNA–Protein interactions for RNA: ENST00000492580.1

ABCA9-206, Transcript of ATP binding cassette subfamily A member 9, human

TSL 3

Gene ABCA9, Length 514 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA9-206	ENST00000492580	ZKSCAN5	Q9Y2L8	839 aa		4.19	□□□□□ -1.74
ABCA9-206	ENST00000492580	GOLGA6L22	H0YM25	854 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	MATN3	O15232	486 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	FOXS1	O43638	330 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	GAS7	O60861	476 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	RAD17	O75943	681 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	TNFRSF1A	P19438	455 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	COMT	P21964	271 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	MECP2	P51608	486 aa	Known RBP	4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	SLC6A3	Q01959	620 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	PRKD1	Q15139	912 aa	Predicted RBP	4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	TCEA2	Q15560	299 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	SPDYA	Q5MJ70	313 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	SLFN12L	Q6IEE8	588 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	POLN	Q7Z5Q5	900 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	SPRED1	Q7Z699	444 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	FUK	Q8N0W3	1084 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	SYNPO	Q8N3V7	929 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	OR5AN1	Q8NGI8	311 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580		Q8TCH9	128 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	RPGR	Q92834	1020 aa	Known RBP	4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	PLA2G12B	Q9BX93	195 aa		4.18	□□□□□ -1.74
ABCA9-206	ENST00000492580	CBX4	O00257	560 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	KPNA6	O60684	536 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	CDC45	O75419	566 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	APOL3	O95236	402 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	PRL	P01236	227 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	CYP17A1	P05093	508 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	ZBTB48	P10074	688 aa	Predicted RBP	4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	C6	P13671	934 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	SDS	P20132	328 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	RPS19	P39019	145 aa	Known RBP	4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	RGS3	P49796	1198 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	NEK4	P51957	841 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	SESN2	P58004	480 aa	Predicted RBP	4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	ZXDA	P98168	799 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	HHEX	Q03014	270 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	NFYC	Q13952	458 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	TBR1	Q16650	682 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	TTC38	Q5R3I4	469 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	NME9	Q86XW9	330 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	C7orf31	Q8N865	590 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	APPBP2	Q92624	585 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	FAM89A	Q96GI7	184 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	TUBGCP5	Q96RT8	1024 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	VPS11	Q9H270	941 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	TMPRSS5	Q9H3S3	457 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	PIF1	Q9H611	641 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	TOMM22	Q9NS69	142 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	SAE1	Q9UBE0	346 aa	Predicted RBP	4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	SRRD	Q9UH36	339 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	CD2AP	Q9Y5K6	639 aa		4.17	□□□□□ -1.74
ABCA9-206	ENST00000492580	H2AFY	O75367	372 aa	Known RBP	4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	RFPL3	O75679	317 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	ACO1	P21399	889 aa	Known RBP	4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	TACR2	P21452	398 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	ADAM15	Q13444	863 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	CDSN	Q15517	529 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	DGKD	Q16760	1214 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	C21orf62-AS1	Q17RA5	79 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	TRIM68	Q6AZZ1	485 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	CNNM4	Q6P4Q7	775 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	KLHDC10	Q6PID8	442 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	C16orf86	Q6ZW13	317 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	USP51	Q70EK9	711 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	SHCBP1	Q8NEM2	672 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	GCDH	Q92947	438 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	TMEM176A	Q96HP8	235 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	RNPC3	Q96LT9	517 aa	Known RBP	4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	WWC2-AS2	Q96NR7	200 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	MSL2	Q9HCI7	577 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	INTS7	Q9NVH2	962 aa	Known RBP	4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	POLR3B	Q9NW08	1133 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	FANCL	Q9NW38	375 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	B4GALT6	Q9UBX8	382 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	MAGEL2	Q9UJ55	1249 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	DENND2A	Q9ULE3	1009 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580	SLC30A1	Q9Y6M5	507 aa		4.16	□□□□□ -1.74
ABCA9-206	ENST00000492580		A0A1W2PRX2	142 aa		4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	GOLGA8B	A8MQT2	603 aa		4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	TRAF5	O00463	557 aa		4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	DVL2	O14641	736 aa		4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	MAFG	O15525	162 aa		4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	SLC26A4	O43511	780 aa		4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	MAF	O75444	373 aa	Predicted RBP	4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	SLC9A1	P19634	815 aa		4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	MSX2	P35548	267 aa	Predicted RBP	4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	SART3	Q15020	963 aa	Known RBP	4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	EPHA7	Q15375	998 aa		4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	NRN1L	Q496H8	165 aa		4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	KRT40	Q6A162	431 aa		4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	TIGD7	Q6NT04	549 aa	Predicted RBP	4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	PASD1	Q8IV76	773 aa		4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	LPP	Q93052	612 aa		4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	GFM2	Q969S9	779 aa	Known RBP	4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.15	□□□□□ -1.75
ABCA9-206	ENST00000492580	DYDC2	Q96IM9	177 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms