RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 LGALS2P05162 132 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 IDEP14735 1019 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 BMP6P22004 513 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 CYP2C19P33261 490 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 SMTNP53814 917 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 POU5F1BQ06416 359 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 SPAG1Q07617 926 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 IQCB1Q15051 598 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 CCL14Q16627 93 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 UGCGQ16739 394 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 HERC4Q5GLZ8 1057 aaPredicted RBP10.69□□□□□ -0.7
USP54-214ENST00000492357 FAM43BQ6ZT52 329 aaPredicted RBP10.69□□□□□ -0.7
USP54-214ENST00000492357 MYOCDQ8IZQ8 938 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 GOLGA5Q8TBA6 731 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 RAET1EQ8TD07 263 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 ZNF296Q8WUU4 475 aaPredicted RBP10.69□□□□□ -0.7
USP54-214ENST00000492357 ANP32BQ92688 251 aaKnown RBP10.69□□□□□ -0.7
USP54-214ENST00000492357 STAMQ92783 540 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 CEP170P1Q96L14 293 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 ARHGAP39Q9C0H5 1083 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 DNAJC25Q9H1X3 360 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 GRPEL1Q9HAV7 217 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 SEPT9Q9UHD8 586 aaPredicted RBP10.69□□□□□ -0.7
USP54-214ENST00000492357 GABRQQ9UN88 632 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 PCDHB13Q9Y5F0 798 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 PPP1R3GB7ZBB8 358 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 H3BRB1 525 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 BIN1O00499 593 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 CABYRO75952 493 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 RARBP10826 455 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 PLS3P13797 630 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 ATP4AP20648 1035 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 CCNE1P24864 410 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 POLGP54098 1239 aaPredicted RBP10.68□□□□□ -0.7
USP54-214ENST00000492357 PAK1Q13153 545 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 MAPK7Q13164 816 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 MYBPC2Q14324 1141 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 DHX8Q14562 1220 aaKnown RBP10.68□□□□□ -0.7
USP54-214ENST00000492357 MXD4Q14582 209 aaPredicted RBP10.68□□□□□ -0.7
USP54-214ENST00000492357 PLCB4Q15147 1175 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 NFIL3Q16649 462 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 EDRF1Q3B7T1 1238 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 IER5Q5VY09 327 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 CENPPQ6IPU0 288 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 EPM2AIP1Q7L775 607 aaPredicted RBP10.68□□□□□ -0.7
USP54-214ENST00000492357 DYMQ7RTS9 669 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 GAS2L3Q86XJ1 694 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 IFNLR1Q8IU57 520 aaPredicted RBP10.68□□□□□ -0.7
USP54-214ENST00000492357 PCSK9Q8NBP7 692 aaKnown RBP10.68□□□□□ -0.7
USP54-214ENST00000492357 RETREG2Q8NC44 543 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 AFG1LQ8WV93 481 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 UIMC1Q96RL1 719 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 CEP89Q96ST8 783 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 C16orf70Q9BSU1 422 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 RUSC1Q9BVN2 902 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 TUT1Q9H6E5 874 aaKnown RBP10.68□□□□□ -0.7
USP54-214ENST00000492357 BCAS3Q9H6U6 928 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 TMEM206Q9H813 350 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 PCDHA2Q9Y5H9 948 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 MYH11P35749 1972 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 ZSWIM8A7E2V4 1837 aa10.68□□□□□ -0.7
USP54-214ENST00000492357 NRCAMQ92823 1304 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 SYNRGQ9UMZ2 1314 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.67□□□□□ -0.7
USP54-214ENST00000492357 HAS3O00219 553 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 PDXKO00764 312 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 HIP1RO75146 1068 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 DNM2P50570 870 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 NCKAP1LP55160 1127 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 SP4Q02446 784 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 CACNB2Q08289 660 aaPredicted RBP10.67□□□□□ -0.7
USP54-214ENST00000492357 TBC1D8BQ0IIM8 1120 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 STK4Q13043 487 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 DMP1Q13316 513 aaPredicted RBP10.67□□□□□ -0.7
USP54-214ENST00000492357 EMC2Q15006 297 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 PCBP1Q15365 356 aaKnown RBP eCLIP10.67□□□□□ -0.7
USP54-214ENST00000492357 PKN2Q16513 984 aaKnown RBP10.67□□□□□ -0.7
USP54-214ENST00000492357 ODR4Q5SWX8 454 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 SPATA1Q5VX52 437 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 SARM1Q6SZW1 724 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 C11orf57Q6ZUT1 292 aaPredicted RBP10.67□□□□□ -0.7
USP54-214ENST00000492357 FAM114A1Q8IWE2 563 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 FAM178BQ8IXR5 827 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 DAW1Q8N136 415 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 ZNF507Q8TCN5 953 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 COPS5Q92905 334 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 IFT74Q96LB3 600 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 TSG101Q99816 390 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 TSEN34Q9BSV6 310 aaKnown RBP10.67□□□□□ -0.7
USP54-214ENST00000492357 STRA6Q9BX79 667 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 NFKBIZQ9BYH8 718 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 RBSNQ9H1K0 784 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 CBX8Q9HC52 389 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 TRAF3IP3Q9Y228 551 aa10.67□□□□□ -0.7
USP54-214ENST00000492357 PITPNM1O00562 1244 aa10.66□□□□□ -0.7
USP54-214ENST00000492357 KIAA0391O15091 583 aaKnown RBP10.66□□□□□ -0.7
USP54-214ENST00000492357 DYNC1LI2O43237 492 aaPredicted RBP10.66□□□□□ -0.7
USP54-214ENST00000492357 USO1O60763 962 aaKnown RBP10.66□□□□□ -0.7
USP54-214ENST00000492357 PPP1R37O75864 691 aa10.66□□□□□ -0.7
USP54-214ENST00000492357 GNAT1P11488 350 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms