RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 CEP55Q53EZ4 464 aa15.09■□□□□ 0.01
USF1-206ENST00000491629 ASCL5Q7RTU5 278 aa15.09■□□□□ 0.01
USF1-206ENST00000491629 HEATR3Q7Z4Q2 680 aa15.09■□□□□ 0.01
USF1-206ENST00000491629 TMEM105Q8N8V8 129 aa15.09■□□□□ 0.01
USF1-206ENST00000491629 KREMEN2Q8NCW0 462 aa15.09■□□□□ 0.01
USF1-206ENST00000491629 RUFY2Q8WXA3 655 aa15.09■□□□□ 0.01
USF1-206ENST00000491629 OSMRQ99650 979 aa15.09■□□□□ 0.01
USF1-206ENST00000491629 AAASQ9NRG9 546 aa15.09■□□□□ 0.01
USF1-206ENST00000491629 TMEM161AQ9NX61 479 aa15.09■□□□□ 0.01
USF1-206ENST00000491629 CNTNAP5Q8WYK1 1306 aa15.09■□□□□ 0.01
USF1-206ENST00000491629 EP300Q09472 2414 aaPredicted RBP15.08■□□□□ 0.01
USF1-206ENST00000491629 C2CD4DB7Z1M9 353 aa15.08■□□□□ 0
USF1-206ENST00000491629 DDX39AO00148 427 aaKnown RBP15.08■□□□□ 0
USF1-206ENST00000491629 GALR2O43603 387 aaPredicted RBP15.08■□□□□ 0
USF1-206ENST00000491629 HBP1O60381 514 aa15.08■□□□□ 0
USF1-206ENST00000491629 VTNP04004 478 aa15.08■□□□□ 0
USF1-206ENST00000491629 LIFRP42702 1097 aa15.08■□□□□ 0
USF1-206ENST00000491629 SLC26A2P50443 739 aa15.08■□□□□ 0
USF1-206ENST00000491629 FUT2Q10981 343 aa15.08■□□□□ 0
USF1-206ENST00000491629 PDE12Q6L8Q7 609 aaKnown RBP15.08■□□□□ 0
USF1-206ENST00000491629 CASC1Q6TDU7 716 aa15.08■□□□□ 0
USF1-206ENST00000491629 KCNT2Q6UVM3 1135 aa15.08■□□□□ 0
USF1-206ENST00000491629 FANCBQ8NB91 859 aa15.08■□□□□ 0
USF1-206ENST00000491629 TCF25Q9BQ70 676 aa15.08■□□□□ 0
USF1-206ENST00000491629 SDF4Q9BRK5 362 aa15.08■□□□□ 0
USF1-206ENST00000491629 POMKQ9H5K3 350 aa15.08■□□□□ 0
USF1-206ENST00000491629 ELAC1Q9H777 363 aaKnown RBP15.08■□□□□ 0
USF1-206ENST00000491629 RIC8AQ9NPQ8 531 aa15.08■□□□□ 0
USF1-206ENST00000491629 COL1A2P08123 1366 aa15.08■□□□□ 0
USF1-206ENST00000491629 CCDC69A6NI79 296 aa15.07■□□□□ 0
USF1-206ENST00000491629 FAM86B1E9PN63 330 aa15.07■□□□□ 0
USF1-206ENST00000491629 FAM86B2P0C5J1 330 aa15.07■□□□□ 0
USF1-206ENST00000491629 LAG3P18627 525 aa15.07■□□□□ 0
USF1-206ENST00000491629 MCM5P33992 734 aa15.07■□□□□ 0
USF1-206ENST00000491629 CLK2P49760 499 aaKnown RBP15.07■□□□□ 0
USF1-206ENST00000491629 CRYBB1P53674 252 aaPredicted RBP15.07■□□□□ 0
USF1-206ENST00000491629 CLLU1OSQ5K130 101 aa15.07■□□□□ 0
USF1-206ENST00000491629 NFXL1Q6ZNB6 911 aa15.07■□□□□ 0
USF1-206ENST00000491629 CRYGNQ8WXF5 182 aa15.07■□□□□ 0
USF1-206ENST00000491629 TNPO1Q92973 898 aaKnown RBP15.07■□□□□ 0
USF1-206ENST00000491629 TMEM87BQ96K49 555 aa15.07■□□□□ 0
USF1-206ENST00000491629 ANO3Q9BYT9 981 aa15.07■□□□□ 0
USF1-206ENST00000491629 LSG1Q9H089 658 aaKnown RBP15.07■□□□□ 0
USF1-206ENST00000491629 TMEM117Q9H0C3 514 aa15.07■□□□□ 0
USF1-206ENST00000491629 ATP6V0A4Q9HBG4 840 aa15.07■□□□□ 0
USF1-206ENST00000491629 ENTPD7Q9NQZ7 604 aa15.07■□□□□ 0
USF1-206ENST00000491629 HCFC2Q9Y5Z7 792 aa15.07■□□□□ 0
USF1-206ENST00000491629 DOCK8Q8NF50 2099 aa15.06■□□□□ 0
USF1-206ENST00000491629 IGLV3-22A0A075B6J6 115 aa15.06■□□□□ 0
USF1-206ENST00000491629 FSD2A1L4K1 749 aa15.06■□□□□ 0
USF1-206ENST00000491629 GPR182O15218 404 aa15.06■□□□□ 0
USF1-206ENST00000491629 WEE2P0C1S8 567 aa15.06■□□□□ 0
USF1-206ENST00000491629 SREBF1P36956 1147 aa15.06■□□□□ 0
USF1-206ENST00000491629 ZNF484Q5JVG2 852 aa15.06■□□□□ 0
USF1-206ENST00000491629 SWSAP1Q6NVH7 229 aa15.06■□□□□ 0
USF1-206ENST00000491629 KANK3Q6NY19 840 aa15.06■□□□□ 0
USF1-206ENST00000491629 TMTC2Q8N394 836 aa15.06■□□□□ 0
USF1-206ENST00000491629 LINC01465Q8N7H1 131 aa15.06■□□□□ 0
USF1-206ENST00000491629 NGRNQ9NPE2 291 aaKnown RBP15.06■□□□□ 0
USF1-206ENST00000491629 ZNF302Q9NR11 478 aa15.06■□□□□ 0
USF1-206ENST00000491629 TSHZ2Q9NRE2 1034 aa15.06■□□□□ 0
USF1-206ENST00000491629 PRR23AA6NEV1 266 aa15.05■□□□□ -0
USF1-206ENST00000491629 C2orf71A6NGG8 1288 aa15.05■□□□□ -0
USF1-206ENST00000491629 BACH1O14867 736 aa15.05■□□□□ -0
USF1-206ENST00000491629 SLC27A2O14975 620 aa15.05■□□□□ -0
USF1-206ENST00000491629 CLASP2O75122 1294 aaKnown RBP15.05■□□□□ -0
USF1-206ENST00000491629 ASGR2P07307 311 aa15.05■□□□□ -0
USF1-206ENST00000491629 CALM1P0DP23 149 aa15.05■□□□□ -0
USF1-206ENST00000491629 CALM2P0DP24 149 aa15.05■□□□□ -0
USF1-206ENST00000491629 CALM3P0DP25 149 aa15.05■□□□□ -0
USF1-206ENST00000491629 HOXB8P17481 243 aaPredicted RBP15.05■□□□□ -0
USF1-206ENST00000491629 NBL1P41271 181 aa15.05■□□□□ -0
USF1-206ENST00000491629 PDXDC2PQ6P474 469 aa15.05■□□□□ -0
USF1-206ENST00000491629 FAM43BQ6ZT52 329 aaPredicted RBP15.05■□□□□ -0
USF1-206ENST00000491629 SGMS1Q86VZ5 419 aa15.05■□□□□ -0
USF1-206ENST00000491629 MICU3Q86XE3 530 aa15.05■□□□□ -0
USF1-206ENST00000491629 ADAM7Q9H2U9 754 aa15.05■□□□□ -0
USF1-206ENST00000491629 ADAMTS10Q9H324 1103 aa15.05■□□□□ -0
USF1-206ENST00000491629 SORCS3Q9UPU3 1222 aa15.05■□□□□ -0
USF1-206ENST00000491629 SLC12A7Q9Y666 1083 aa15.05■□□□□ -0
USF1-206ENST00000491629 FOSP01100 380 aaPredicted RBP15.04■□□□□ -0
USF1-206ENST00000491629 CLCN3P51790 818 aa15.04■□□□□ -0
USF1-206ENST00000491629 NUBP1P53384 320 aa15.04■□□□□ -0
USF1-206ENST00000491629 NAPAP54920 295 aa15.04■□□□□ -0
USF1-206ENST00000491629 FAM160B1Q5W0V3 765 aa15.04■□□□□ -0
USF1-206ENST00000491629 NIPA1Q7RTP0 329 aa15.04■□□□□ -0
USF1-206ENST00000491629 TRMT1LQ7Z2T5 733 aaKnown RBP15.04■□□□□ -0
USF1-206ENST00000491629 TMC7Q7Z402 723 aa15.04■□□□□ -0
USF1-206ENST00000491629 ZBTB33Q86T24 672 aa15.04■□□□□ -0
USF1-206ENST00000491629 ZNF598Q86UK7 904 aaKnown RBP15.04■□□□□ -0
USF1-206ENST00000491629 ECHDC2Q86YB7 292 aa15.04■□□□□ -0
USF1-206ENST00000491629 SLC39A11Q8N1S5 342 aa15.04■□□□□ -0
USF1-206ENST00000491629 C12orf76Q8N812 135 aaPredicted RBP15.04■□□□□ -0
USF1-206ENST00000491629 MRPL43Q8N983 215 aaKnown RBP15.04■□□□□ -0
USF1-206ENST00000491629 ZNF668Q96K58 619 aaPredicted RBP15.04■□□□□ -0
USF1-206ENST00000491629 ZNF558Q96NG5 402 aa15.04■□□□□ -0
USF1-206ENST00000491629 PUF60Q9UHX1 559 aaKnown RBP15.04■□□□□ -0
USF1-206ENST00000491629 MAFBQ9Y5Q3 323 aaPredicted RBP15.04■□□□□ -0
USF1-206ENST00000491629 DOCK6Q96HP0 2047 aa15.04■□□□□ -0
USF1-206ENST00000491629 NT5C1B-RDH14C9J2C7 533 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms