RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 ZBTB38Q8NAP3 1195 aaPredicted RBP6.37□□□□□ -1.39
PHC3-213ENST00000491258 CRAMP1Q96RY5 1269 aa6.37□□□□□ -1.39
PHC3-213ENST00000491258 AGAP2Q99490 1192 aa6.37□□□□□ -1.39
PHC3-213ENST00000491258 SH3BP1Q9Y3L3 701 aa6.37□□□□□ -1.39
PHC3-213ENST00000491258 DMRT1Q9Y5R6 373 aa6.37□□□□□ -1.39
PHC3-213ENST00000491258 FSTL4Q6MZW2 842 aa6.36□□□□□ -1.39
PHC3-213ENST00000491258 NOSTRINQ8IVI9 506 aa6.36□□□□□ -1.39
PHC3-213ENST00000491258 CALML6Q8TD86 181 aa6.36□□□□□ -1.39
PHC3-213ENST00000491258 EXOC2Q96KP1 924 aa6.36□□□□□ -1.39
PHC3-213ENST00000491258 MPHOSPH9Q99550 1183 aa6.36□□□□□ -1.39
PHC3-213ENST00000491258 KCNH7Q9NS40 1196 aa6.36□□□□□ -1.39
PHC3-213ENST00000491258 MSRB2Q9Y3D2 182 aa6.36□□□□□ -1.39
PHC3-213ENST00000491258 PMS2P1A4D2B8 440 aa6.35□□□□□ -1.39
PHC3-213ENST00000491258 RPS6KA4O75676 772 aa6.35□□□□□ -1.39
PHC3-213ENST00000491258 STK10O94804 968 aaKnown RBP6.35□□□□□ -1.39
PHC3-213ENST00000491258 APPP05067 770 aa6.35□□□□□ -1.39
PHC3-213ENST00000491258 APEX1P27695 318 aaKnown RBP6.35□□□□□ -1.39
PHC3-213ENST00000491258 ATP2C1P98194 919 aaPredicted RBP6.35□□□□□ -1.39
PHC3-213ENST00000491258 MAP3K12Q12852 859 aa6.35□□□□□ -1.39
PHC3-213ENST00000491258 SAFB2Q14151 953 aaKnown RBP eCLIP6.35□□□□□ -1.39
PHC3-213ENST00000491258 TMEM132BQ14DG7 1078 aa6.35□□□□□ -1.39
PHC3-213ENST00000491258 CKAP2LQ8IYA6 745 aa6.35□□□□□ -1.39
PHC3-213ENST00000491258 ANKRD35Q8N283 1001 aa6.35□□□□□ -1.39
PHC3-213ENST00000491258 RABGGTAQ92696 567 aa6.35□□□□□ -1.39
PHC3-213ENST00000491258 ERCC4Q92889 916 aaPredicted RBP6.35□□□□□ -1.39
PHC3-213ENST00000491258 PRRX2Q99811 253 aa6.35□□□□□ -1.39
PHC3-213ENST00000491258 TTPALQ9BTX7 342 aa6.35□□□□□ -1.39
PHC3-213ENST00000491258 COQ6Q9Y2Z9 468 aa6.35□□□□□ -1.39
PHC3-213ENST00000491258 ASB1Q9Y576 335 aa6.35□□□□□ -1.39
PHC3-213ENST00000491258 RASSF10A6NK89 507 aa6.34□□□□□ -1.39
PHC3-213ENST00000491258 DIAPH1O60610 1272 aaKnown RBP6.34□□□□□ -1.39
PHC3-213ENST00000491258 FAM153BP0C7A2 387 aa6.34□□□□□ -1.39
PHC3-213ENST00000491258 SCNN1GP51170 649 aa6.34□□□□□ -1.39
PHC3-213ENST00000491258 RASGRF1Q13972 1273 aa6.34□□□□□ -1.39
PHC3-213ENST00000491258 CNGB1Q14028 1251 aaPredicted RBP6.34□□□□□ -1.39
PHC3-213ENST00000491258 ACAP1Q15027 740 aa6.34□□□□□ -1.39
PHC3-213ENST00000491258 DHRS4Q9BTZ2 278 aa6.34□□□□□ -1.39
PHC3-213ENST00000491258 NDOR1Q9UHB4 597 aa6.34□□□□□ -1.39
PHC3-213ENST00000491258 MAGEL2Q9UJ55 1249 aa6.34□□□□□ -1.39
PHC3-213ENST00000491258 CTDP1Q9Y5B0 961 aaPredicted RBP6.34□□□□□ -1.39
PHC3-213ENST00000491258 PEX11BO96011 259 aa6.33□□□□□ -1.4
PHC3-213ENST00000491258 KLHDC10Q6PID8 442 aa6.33□□□□□ -1.4
PHC3-213ENST00000491258 Q6ZRM9 215 aa6.33□□□□□ -1.4
PHC3-213ENST00000491258 PPP1R1BQ9UD71 204 aaPredicted RBP6.33□□□□□ -1.4
PHC3-213ENST00000491258 VWA7Q9Y334 891 aa6.33□□□□□ -1.4
PHC3-213ENST00000491258 MRPS23Q9Y3D9 190 aaKnown RBP6.33□□□□□ -1.4
PHC3-213ENST00000491258 GOLGA6L22H0YM25 854 aa6.32□□□□□ -1.4
PHC3-213ENST00000491258 HIP1RO75146 1068 aa6.32□□□□□ -1.4
PHC3-213ENST00000491258 FSTL1Q12841 308 aa6.32□□□□□ -1.4
PHC3-213ENST00000491258 PCSK4Q6UW60 755 aa6.32□□□□□ -1.4
PHC3-213ENST00000491258 ULK2Q8IYT8 1036 aa6.32□□□□□ -1.4
PHC3-213ENST00000491258 BCL6BQ8N143 479 aaPredicted RBP6.32□□□□□ -1.4
PHC3-213ENST00000491258 LPPQ93052 612 aa6.32□□□□□ -1.4
PHC3-213ENST00000491258 RPL10LQ96L21 214 aaKnown RBP6.32□□□□□ -1.4
PHC3-213ENST00000491258 NRDE2Q9H7Z3 1164 aa6.32□□□□□ -1.4
PHC3-213ENST00000491258 SLC52A2Q9HAB3 445 aa6.32□□□□□ -1.4
PHC3-213ENST00000491258 B3GALT1Q9Y5Z6 326 aa6.32□□□□□ -1.4
PHC3-213ENST00000491258 SLC12A8A0AV02 714 aa6.31□□□□□ -1.4
PHC3-213ENST00000491258 GOLGA8BA8MQT2 603 aa6.31□□□□□ -1.4
PHC3-213ENST00000491258 H2AFYO75367 372 aaKnown RBP6.31□□□□□ -1.4
PHC3-213ENST00000491258 RASGRP1O95267 797 aa6.31□□□□□ -1.4
PHC3-213ENST00000491258 KRT4P19013 534 aa6.31□□□□□ -1.4
PHC3-213ENST00000491258 SDHAP31040 664 aa6.31□□□□□ -1.4
PHC3-213ENST00000491258 ADCY7P51828 1080 aa6.31□□□□□ -1.4
PHC3-213ENST00000491258 SESN2P58004 480 aaPredicted RBP6.31□□□□□ -1.4
PHC3-213ENST00000491258 SLC25A3Q00325 362 aa6.31□□□□□ -1.4
PHC3-213ENST00000491258 ZNF662Q6ZS27 426 aa6.31□□□□□ -1.4
PHC3-213ENST00000491258 GAREM2Q75VX8 874 aa6.31□□□□□ -1.4
PHC3-213ENST00000491258 DLG3Q92796 817 aa6.31□□□□□ -1.4
PHC3-213ENST00000491258 GCDHQ92947 438 aaPredicted RBP6.31□□□□□ -1.4
PHC3-213ENST00000491258 MIEF2Q96C03 454 aa6.31□□□□□ -1.4
PHC3-213ENST00000491258 SLC7A6OSQ96CW6 309 aaPredicted RBP6.31□□□□□ -1.4
PHC3-213ENST00000491258 CCDC113Q9H0I3 377 aa6.31□□□□□ -1.4
PHC3-213ENST00000491258 SLC6A15Q9H2J7 730 aa6.31□□□□□ -1.4
PHC3-213ENST00000491258 SAE1Q9UBE0 346 aaPredicted RBP6.31□□□□□ -1.4
PHC3-213ENST00000491258 RBM8AQ9Y5S9 174 aaKnown RBP6.31□□□□□ -1.4
PHC3-213ENST00000491258 TMEM191CA6NGB0 347 aa6.3□□□□□ -1.4
PHC3-213ENST00000491258 FOXN1O15353 648 aa6.3□□□□□ -1.4
PHC3-213ENST00000491258 MAN2A2P49641 1150 aa6.3□□□□□ -1.4
PHC3-213ENST00000491258 BPIFB4P59827 614 aa6.3□□□□□ -1.4
PHC3-213ENST00000491258 ZC3H6P61129 1189 aaKnown RBP6.3□□□□□ -1.4
PHC3-213ENST00000491258 ALDH6A1Q02252 535 aaKnown RBP6.3□□□□□ -1.4
PHC3-213ENST00000491258 CATSPEREQ5SY80 951 aa6.3□□□□□ -1.4
PHC3-213ENST00000491258 DPY19L2P1Q6NXN4 242 aa6.3□□□□□ -1.4
PHC3-213ENST00000491258 Q6ZPA2 131 aa6.3□□□□□ -1.4
PHC3-213ENST00000491258 GSPT2Q8IYD1 628 aaKnown RBP6.3□□□□□ -1.4
PHC3-213ENST00000491258 ANKRD53Q8N9V6 530 aa6.3□□□□□ -1.4
PHC3-213ENST00000491258 CELF4Q9BZC1 486 aaKnown RBP6.3□□□□□ -1.4
PHC3-213ENST00000491258 KDM2BQ8NHM5 1336 aa6.29□□□□□ -1.4
PHC3-213ENST00000491258 MAFO75444 373 aaPredicted RBP6.29□□□□□ -1.4
PHC3-213ENST00000491258 ELAVL1Q15717 326 aaKnown RBP6.29□□□□□ -1.4
PHC3-213ENST00000491258 LAIR1Q6GTX8 287 aa6.29□□□□□ -1.4
PHC3-213ENST00000491258 OVCH1Q7RTY7 1134 aa6.29□□□□□ -1.4
PHC3-213ENST00000491258 GFM2Q969S9 779 aaKnown RBP6.29□□□□□ -1.4
PHC3-213ENST00000491258 MAGEB10Q96LZ2 347 aaPredicted RBP6.29□□□□□ -1.4
PHC3-213ENST00000491258 GPHA2Q96T91 129 aa6.29□□□□□ -1.4
PHC3-213ENST00000491258 GPRC5BQ9NZH0 403 aa6.29□□□□□ -1.4
PHC3-213ENST00000491258 DENND2AQ9ULE3 1009 aa6.29□□□□□ -1.4
PHC3-213ENST00000491258 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.28□□□□□ -1.4
PHC3-213ENST00000491258 C2orf78A6NCI8 922 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms