RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ODF2LQ9ULJ1 636 aa20.7■□□□□ 0.9
MCF2L-230ENST00000491028 MAGEB2O15479 319 aa20.69■□□□□ 0.9
MCF2L-230ENST00000491028 MAFO75444 373 aaPredicted RBP20.69■□□□□ 0.9
MCF2L-230ENST00000491028 KRT18P05783 430 aaKnown RBP20.69■□□□□ 0.9
MCF2L-230ENST00000491028 GNAT1P11488 350 aa20.69■□□□□ 0.9
MCF2L-230ENST00000491028 CHMP4BP1P59074 171 aa20.69■□□□□ 0.9
MCF2L-230ENST00000491028 NBPF20Q3BBV1 942 aa20.69■□□□□ 0.9
MCF2L-230ENST00000491028 ARSHQ5FYA8 562 aa20.69■□□□□ 0.9
MCF2L-230ENST00000491028 CAVIN1Q6NZI2 390 aaKnown RBP20.69■□□□□ 0.9
MCF2L-230ENST00000491028 STARD7Q9NQZ5 370 aa20.69■□□□□ 0.9
MCF2L-230ENST00000491028 PDLIM7Q9NR12 457 aa20.69■□□□□ 0.9
MCF2L-230ENST00000491028 TMEM63CQ9P1W3 806 aa20.69■□□□□ 0.9
MCF2L-230ENST00000491028 IGKV6-21A0A0C4DH24 114 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 A0A0U1RQG5 324 aaPredicted RBP20.68■□□□□ 0.9
MCF2L-230ENST00000491028 C17orf102A2RUQ5 167 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 C22orf31O95567 290 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 PRR29P0C7W0 189 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 ASIC1P78348 528 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 DPYDQ12882 1025 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 PNOCQ13519 176 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 ITGA7Q13683 1181 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 EMC2Q15006 297 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 CAMK4Q16566 473 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 RETREG2Q8NC44 543 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 LMBR1Q8WVP7 490 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 DNAJC19Q96DA6 116 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 HDAC6Q9UBN7 1215 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 GTF2IRD1Q9UHL9 959 aa20.68■□□□□ 0.9
MCF2L-230ENST00000491028 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.67■□□□□ 0.9
MCF2L-230ENST00000491028 MBLAC1A4D2B0 266 aaPredicted RBP20.67■□□□□ 0.9
MCF2L-230ENST00000491028 SMC2O95347 1197 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 KLRC1P26715 233 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 IGBP1P78318 339 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 ADAM17P78536 824 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 CUL4BQ13620 913 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 GIT2Q14161 759 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 MTHFD1LQ6UB35 978 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 DYMQ7RTS9 669 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 TRAPPC12Q8WVT3 735 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 VTI1AQ96AJ9 217 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 DRC1Q96MC2 740 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 REEP2Q9BRK0 252 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 BLZF1Q9H2G9 400 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 XPNPEP1Q9NQW7 623 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 SETD4Q9NVD3 440 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 TUBE1Q9UJT0 475 aa20.67■□□□□ 0.9
MCF2L-230ENST00000491028 MYH11P35749 1972 aa20.66■□□□□ 0.9
MCF2L-230ENST00000491028 PVALEFA0A1B0GWK0 134 aa20.66■□□□□ 0.9
MCF2L-230ENST00000491028 TBCAO75347 108 aaKnown RBP20.66■□□□□ 0.9
MCF2L-230ENST00000491028 MNX1P50219 401 aaPredicted RBP20.66■□□□□ 0.9
MCF2L-230ENST00000491028 MARCH8Q5T0T0 291 aa20.66■□□□□ 0.9
MCF2L-230ENST00000491028 RBM43Q6ZSC3 357 aaKnown RBP20.66■□□□□ 0.9
MCF2L-230ENST00000491028 UNC13DQ70J99 1090 aa20.66■□□□□ 0.9
MCF2L-230ENST00000491028 CCDC65Q8IXS2 484 aa20.66■□□□□ 0.9
MCF2L-230ENST00000491028 SLC43A3Q8NBI5 491 aa20.66■□□□□ 0.9
MCF2L-230ENST00000491028 SPATA20Q8TB22 786 aa20.66■□□□□ 0.9
MCF2L-230ENST00000491028 TCP11Q8WWU5 503 aa20.66■□□□□ 0.9
MCF2L-230ENST00000491028 KIFAP3Q92845 792 aa20.66■□□□□ 0.9
MCF2L-230ENST00000491028 CCDC47Q96A33 483 aaKnown RBP20.66■□□□□ 0.9
MCF2L-230ENST00000491028 GSDMAQ96QA5 445 aa20.66■□□□□ 0.9
MCF2L-230ENST00000491028 GRIN2DO15399 1336 aa20.66■□□□□ 0.9
MCF2L-230ENST00000491028 FRMD3A2A2Y4 597 aa20.65■□□□□ 0.9
MCF2L-230ENST00000491028 HIP1RO75146 1068 aa20.65■□□□□ 0.9
MCF2L-230ENST00000491028 TMOD1P28289 359 aa20.65■□□□□ 0.9
MCF2L-230ENST00000491028 CASP1P29466 404 aa20.65■□□□□ 0.9
MCF2L-230ENST00000491028 MAPK7Q13164 816 aa20.65■□□□□ 0.9
MCF2L-230ENST00000491028 FAM47CQ5HY64 1035 aa20.65■□□□□ 0.9
MCF2L-230ENST00000491028 NT5DC1Q5TFE4 455 aa20.65■□□□□ 0.9
MCF2L-230ENST00000491028 SMARCE1Q969G3 411 aa20.65■□□□□ 0.9
MCF2L-230ENST00000491028 RMND1Q9NWS8 449 aa20.65■□□□□ 0.9
MCF2L-230ENST00000491028 KIAA1468Q9P260 1216 aa20.65■□□□□ 0.9
MCF2L-230ENST00000491028 PCDHA5Q9Y5H7 936 aa20.65■□□□□ 0.9
MCF2L-230ENST00000491028 PCDHA2Q9Y5H9 948 aa20.65■□□□□ 0.9
MCF2L-230ENST00000491028 COL4A3BPQ9Y5P4 624 aa20.65■□□□□ 0.9
MCF2L-230ENST00000491028 NPHP3-ACAD11A0A0J9YXS1 232 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 ARVCFO00192 962 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 KLRC4O43908 158 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 FAM13AO94988 1023 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 LETM1O95202 739 aaPredicted RBP20.64■□□□□ 0.89
MCF2L-230ENST00000491028 RPN1P04843 607 aaKnown RBP20.64■□□□□ 0.89
MCF2L-230ENST00000491028 IDEP14735 1019 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 GAP43P17677 238 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 DNM2P50570 870 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 ZNF131P52739 623 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 RTP1P59025 263 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 RAD51AP2Q09MP3 1159 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 KCNB1Q14721 858 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 FAM102BQ5T8I3 360 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 IER5Q5VY09 327 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 EFCAB12Q6NXP0 572 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 LINC01465Q8N7H1 131 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 C17orf75Q9HAS0 396 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 PANK4Q9NVE7 773 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 SEL1LQ9UBV2 794 aa20.64■□□□□ 0.89
MCF2L-230ENST00000491028 SMIM35A0A1B0GVV1 85 aa20.63■□□□□ 0.89
MCF2L-230ENST00000491028 COL6A1P12109 1028 aa20.63■□□□□ 0.89
MCF2L-230ENST00000491028 SARSP49591 514 aaKnown RBP20.63■□□□□ 0.89
MCF2L-230ENST00000491028 CACNB1Q02641 598 aaPredicted RBP20.63■□□□□ 0.89
MCF2L-230ENST00000491028 HIC1Q14526 733 aa20.63■□□□□ 0.89
MCF2L-230ENST00000491028 GDF6Q6KF10 455 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms