RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 A0A087X0T9 212 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 CYP2D7A0A087X1C5 515 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 PPLO60437 1756 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 SPAG7O75391 227 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 IFNB1P01574 187 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 FAM228BP0C875 321 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 PMS1P54277 932 aaKnown RBP12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 DEUP1Q05D60 604 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 TMC3Q7Z5M5 1100 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 JAMLQ86YT9 394 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 ROPN1BQ9BZX4 212 aaPredicted RBP12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 ROPN1Q9HAT0 212 aaPredicted RBP12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 RXFP1Q9HBX9 757 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 NDE1Q9NXR1 346 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 CFAP69A5D8W1 941 aa12.15□□□□□ -0.47
CRNKL1-204ENST00000490910 GSTO1P78417 241 aa12.15□□□□□ -0.47
CRNKL1-204ENST00000490910 NR1H3Q13133 447 aa12.15□□□□□ -0.47
CRNKL1-204ENST00000490910 SLC17A8Q8NDX2 589 aa12.15□□□□□ -0.47
CRNKL1-204ENST00000490910 ZNF483Q8TF39 744 aaPredicted RBP12.15□□□□□ -0.47
CRNKL1-204ENST00000490910 DCLRE1BQ9H816 532 aa12.15□□□□□ -0.47
CRNKL1-204ENST00000490910 KANSL2Q9H9L4 492 aa12.15□□□□□ -0.47
CRNKL1-204ENST00000490910 SEC31BQ9NQW1 1179 aa12.15□□□□□ -0.47
CRNKL1-204ENST00000490910 KIAA1024Q9UPX6 916 aa12.15□□□□□ -0.47
CRNKL1-204ENST00000490910 RABGAP1Q9Y3P9 1069 aa12.15□□□□□ -0.47
CRNKL1-204ENST00000490910 UBTFL6P0CB48 400 aaPredicted RBP12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 TRMT1LQ7Z2T5 733 aaKnown RBP12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 MAB21L3Q8N8X9 362 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 RDH13Q8NBN7 331 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 C1orf131Q8NDD1 294 aaKnown RBP12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 SPATA20Q8TB22 786 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 ACTRT1Q8TDG2 376 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 CENPTQ96BT3 561 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 FAM161BQ96MY7 647 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 CCDC87Q9NVE4 849 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 PAIP2BQ9ULR5 123 aaKnown RBP12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 LIN7AO14910 233 aaPredicted RBP12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 KRT5P13647 590 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 TARSP26639 723 aaKnown RBP12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 FAM43BQ6ZT52 329 aaPredicted RBP12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 MYCT1Q8N699 235 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 TTLL11Q8NHH1 800 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 RFFLQ8WZ73 363 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 CCT6BQ92526 530 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 SH3GLB2Q9NR46 395 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 USTQ9Y2C2 406 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 CEMIPQ8WUJ3 1361 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 PSMC4P43686 418 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 CYP2J2P51589 502 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 RASGRF1Q13972 1273 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 TNIP1Q15025 636 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 TRMT10CQ7L0Y3 403 aaKnown RBP12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 MAP7D3Q8IWC1 876 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 SYN2Q92777 582 aaPredicted RBP12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 RPGRQ92834 1020 aaKnown RBP12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 RHBDL2Q9NX52 303 aa12.14□□□□□ -0.47
CRNKL1-204ENST00000490910 MROH1Q8NDA8 1641 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 NDC80O14777 642 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 LRRN2O75325 713 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 AP2B1P63010 937 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 PPP4R3CPQ6ZMV5 832 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 PALM2Q8IXS6 379 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 EPS8L3Q8TE67 593 aaKnown RBP12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 SREK1Q8WXA9 508 aaKnown RBP12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 C7orf25Q9BPX7 421 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 PCDH11XQ9BZA7 1347 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 PJA2O43164 708 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 CCDC22O60826 627 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 CALB2P22676 271 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 KPNB1Q14974 876 aaKnown RBP12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 GRAMD1BQ3KR37 738 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 OPTNQ96CV9 577 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 GPCPD1Q9NPB8 672 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 ANKIB1Q9P2G1 1089 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 HAO1Q9UJM8 370 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 RFC5P40937 340 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 MIS18BP1Q6P0N0 1132 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 ZNF507Q8TCN5 953 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 GLG1Q92896 1179 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 SUCLA2Q9P2R7 463 aaPredicted RBP12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 ZNF148Q9UQR1 794 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 TMEM2Q9UHN6 1383 aa12.13□□□□□ -0.47
CRNKL1-204ENST00000490910 TOM1O60784 492 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 CDH16O75309 829 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 FECHP22830 423 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 RPS6KA3P51812 740 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 LGSNQ5TDP6 509 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 PAGR1Q9BTK6 254 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 JAG2Q9Y219 1238 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 LRCH1Q9Y2L9 728 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 ZNF711Q9Y462 761 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 E7ENQ6 273 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 SNX3O60493 162 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 SERPINB3P29508 390 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 CACNA2D1P54289 1103 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 BLMHQ13867 455 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 RCN1Q15293 331 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 BTNL9Q6UXG8 535 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 RFX8Q6ZV50 586 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 FBXO25Q8TCJ0 367 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 STK32AQ8WU08 396 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms