RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 BARX2Q9UMQ3 279 aaPredicted RBP17.67■□□□□ 0.42
COL2A1-207ENST00000490609 CACNA1HO95180 2353 aa17.66■□□□□ 0.42
COL2A1-207ENST00000490609 TBKBP1A7MCY6 615 aa17.66■□□□□ 0.42
COL2A1-207ENST00000490609 LOC730098B7Z3J9 87 aa17.66■□□□□ 0.42
COL2A1-207ENST00000490609 PER2O15055 1255 aa17.66■□□□□ 0.42
COL2A1-207ENST00000490609 PRPF3O43395 683 aaKnown RBP17.66■□□□□ 0.42
COL2A1-207ENST00000490609 FGFR1P11362 822 aa17.66■□□□□ 0.42
COL2A1-207ENST00000490609 CRYBB1P53674 252 aaPredicted RBP17.66■□□□□ 0.42
COL2A1-207ENST00000490609 FAM160B1Q5W0V3 765 aa17.66■□□□□ 0.42
COL2A1-207ENST00000490609 ZNF746Q6NUN9 644 aaPredicted RBP17.66■□□□□ 0.42
COL2A1-207ENST00000490609 Q6ZUG5 572 aa17.66■□□□□ 0.42
COL2A1-207ENST00000490609 BBXQ8WY36 941 aaPredicted RBP17.66■□□□□ 0.42
COL2A1-207ENST00000490609 ZNF577Q9BSK1 485 aa17.66■□□□□ 0.42
COL2A1-207ENST00000490609 GLT8D2Q9H1C3 349 aa17.66■□□□□ 0.42
COL2A1-207ENST00000490609 PCDHB7Q9Y5E2 793 aa17.66■□□□□ 0.42
COL2A1-207ENST00000490609 IBSPP21815 317 aaPredicted RBP17.65■□□□□ 0.42
COL2A1-207ENST00000490609 NDUFV1P49821 464 aa17.65■□□□□ 0.42
COL2A1-207ENST00000490609 CBX2Q14781 532 aaPredicted RBP17.65■□□□□ 0.42
COL2A1-207ENST00000490609 MIS18BP1Q6P0N0 1132 aa17.65■□□□□ 0.42
COL2A1-207ENST00000490609 FBXL16Q8N461 479 aa17.65■□□□□ 0.42
COL2A1-207ENST00000490609 COLGALT1Q8NBJ5 622 aa17.65■□□□□ 0.42
COL2A1-207ENST00000490609 PHKBQ93100 1093 aa17.65■□□□□ 0.42
COL2A1-207ENST00000490609 GJA10Q969M2 543 aa17.65■□□□□ 0.42
COL2A1-207ENST00000490609 FBXL18Q96ME1 805 aa17.65■□□□□ 0.42
COL2A1-207ENST00000490609 CASD1Q96PB1 797 aa17.65■□□□□ 0.42
COL2A1-207ENST00000490609 LRFN2Q9ULH4 789 aa17.65■□□□□ 0.42
COL2A1-207ENST00000490609 SNX14Q9Y5W7 946 aa17.65■□□□□ 0.42
COL2A1-207ENST00000490609 FGF18O76093 207 aa17.64■□□□□ 0.41
COL2A1-207ENST00000490609 STBD1O95210 358 aa17.64■□□□□ 0.41
COL2A1-207ENST00000490609 METAP2P50579 478 aaKnown RBP eCLIP17.64■□□□□ 0.41
COL2A1-207ENST00000490609 CLCN3P51790 818 aa17.64■□□□□ 0.41
COL2A1-207ENST00000490609 UGCGQ16739 394 aa17.64■□□□□ 0.41
COL2A1-207ENST00000490609 DUSP6Q16828 381 aa17.64■□□□□ 0.41
COL2A1-207ENST00000490609 TRMT1LQ7Z2T5 733 aaKnown RBP17.64■□□□□ 0.41
COL2A1-207ENST00000490609 ALYREFQ86V81 257 aaKnown RBP17.64■□□□□ 0.41
COL2A1-207ENST00000490609 SUSD6Q92537 303 aa17.64■□□□□ 0.41
COL2A1-207ENST00000490609 BRF1Q92994 677 aa17.64■□□□□ 0.41
COL2A1-207ENST00000490609 CEP89Q96ST8 783 aa17.64■□□□□ 0.41
COL2A1-207ENST00000490609 C1orf112Q9NSG2 853 aa17.64■□□□□ 0.41
COL2A1-207ENST00000490609 TBC1D22BQ9NU19 505 aa17.64■□□□□ 0.41
COL2A1-207ENST00000490609 TMEM161AQ9NX61 479 aa17.64■□□□□ 0.41
COL2A1-207ENST00000490609 GABBR1Q9UBS5 961 aa17.64■□□□□ 0.41
COL2A1-207ENST00000490609 USP15Q9Y4E8 981 aaPredicted RBP17.64■□□□□ 0.41
COL2A1-207ENST00000490609 PCDHA10Q9Y5I2 948 aa17.64■□□□□ 0.41
COL2A1-207ENST00000490609 DENND3A2RUS2 1198 aa17.63■□□□□ 0.41
COL2A1-207ENST00000490609 GPR182O15218 404 aa17.63■□□□□ 0.41
COL2A1-207ENST00000490609 MSH4O15457 936 aa17.63■□□□□ 0.41
COL2A1-207ENST00000490609 HSPA4P34932 840 aa17.63■□□□□ 0.41
COL2A1-207ENST00000490609 NHLH1Q02575 133 aa17.63■□□□□ 0.41
COL2A1-207ENST00000490609 KRT32Q14532 448 aa17.63■□□□□ 0.41
COL2A1-207ENST00000490609 PRR16Q569H4 304 aa17.63■□□□□ 0.41
COL2A1-207ENST00000490609 FAM43BQ6ZT52 329 aaPredicted RBP17.63■□□□□ 0.41
COL2A1-207ENST00000490609 EDAQ92838 391 aa17.63■□□□□ 0.41
COL2A1-207ENST00000490609 UPF3BQ9BZI7 483 aaKnown RBP17.63■□□□□ 0.41
COL2A1-207ENST00000490609 S1PR5Q9H228 398 aa17.63■□□□□ 0.41
COL2A1-207ENST00000490609 ELAC1Q9H777 363 aaKnown RBP17.63■□□□□ 0.41
COL2A1-207ENST00000490609 TLE6Q9H808 572 aa17.63■□□□□ 0.41
COL2A1-207ENST00000490609 CDC45O75419 566 aa17.62■□□□□ 0.41
COL2A1-207ENST00000490609 HMGB1P09429 215 aaKnown RBP17.62■□□□□ 0.41
COL2A1-207ENST00000490609 EVCP57679 992 aa17.62■□□□□ 0.41
COL2A1-207ENST00000490609 NLRP11P59045 1033 aaKnown RBP17.62■□□□□ 0.41
COL2A1-207ENST00000490609 UBE3AQ05086 875 aa17.62■□□□□ 0.41
COL2A1-207ENST00000490609 DRP2Q13474 957 aa17.62■□□□□ 0.41
COL2A1-207ENST00000490609 EFCAB12Q6NXP0 572 aa17.62■□□□□ 0.41
COL2A1-207ENST00000490609 B3GNT9Q6UX72 402 aa17.62■□□□□ 0.41
COL2A1-207ENST00000490609 TMEM184AQ6ZMB5 413 aa17.62■□□□□ 0.41
COL2A1-207ENST00000490609 SMAP1Q8IYB5 467 aaPredicted RBP17.62■□□□□ 0.41
COL2A1-207ENST00000490609 REXO1Q8N1G1 1221 aaKnown RBP17.62■□□□□ 0.41
COL2A1-207ENST00000490609 LRRC71Q8N4P6 559 aa17.62■□□□□ 0.41
COL2A1-207ENST00000490609 METTL13Q8N6R0 699 aa17.62■□□□□ 0.41
COL2A1-207ENST00000490609 ZNF668Q96K58 619 aaPredicted RBP17.62■□□□□ 0.41
COL2A1-207ENST00000490609 JAKMIP1Q96N16 626 aaKnown RBP17.62■□□□□ 0.41
COL2A1-207ENST00000490609 POP1Q99575 1024 aaKnown RBP17.62■□□□□ 0.41
COL2A1-207ENST00000490609 TLR9Q9NR96 1032 aa17.62■□□□□ 0.41
COL2A1-207ENST00000490609 PCDHB12Q9Y5F1 795 aa17.62■□□□□ 0.41
COL2A1-207ENST00000490609 HIDE1A8MVS5 230 aa17.61■□□□□ 0.41
COL2A1-207ENST00000490609 PSAPP07602 524 aa17.61■□□□□ 0.41
COL2A1-207ENST00000490609 ATF7P17544 494 aaPredicted RBP17.61■□□□□ 0.41
COL2A1-207ENST00000490609 PBX3P40426 434 aa17.61■□□□□ 0.41
COL2A1-207ENST00000490609 SETQ01105 290 aaPredicted RBP17.61■□□□□ 0.41
COL2A1-207ENST00000490609 PLCB3Q01970 1234 aa17.61■□□□□ 0.41
COL2A1-207ENST00000490609 TARBP2Q15633 366 aaKnown RBP17.61■□□□□ 0.41
COL2A1-207ENST00000490609 CSPP1Q1MSJ5 1256 aa17.61■□□□□ 0.41
COL2A1-207ENST00000490609 CLLU1OSQ5K130 101 aa17.61■□□□□ 0.41
COL2A1-207ENST00000490609 SYCE2Q6PIF2 218 aa17.61■□□□□ 0.41
COL2A1-207ENST00000490609 CENPQQ7L2Z9 268 aaPredicted RBP17.61■□□□□ 0.41
COL2A1-207ENST00000490609 ZNF598Q86UK7 904 aaKnown RBP17.61■□□□□ 0.41
COL2A1-207ENST00000490609 SLC5A5Q92911 643 aa17.61■□□□□ 0.41
COL2A1-207ENST00000490609 C6orf50Q9HD87 102 aa17.61■□□□□ 0.41
COL2A1-207ENST00000490609 NAP1L2Q9ULW6 460 aaPredicted RBP17.61■□□□□ 0.41
COL2A1-207ENST00000490609 M0R2N6 131 aa17.6■□□□□ 0.41
COL2A1-207ENST00000490609 FGFR4P22455 802 aa17.6■□□□□ 0.41
COL2A1-207ENST00000490609 RPS6KB1P23443 525 aa17.6■□□□□ 0.41
COL2A1-207ENST00000490609 EIF4BP23588 611 aaKnown RBP17.6■□□□□ 0.41
COL2A1-207ENST00000490609 PDIA3P30101 505 aaKnown RBP17.6■□□□□ 0.41
COL2A1-207ENST00000490609 NPY5RQ15761 445 aa17.6■□□□□ 0.41
COL2A1-207ENST00000490609 IER5LQ5T953 404 aa17.6■□□□□ 0.41
COL2A1-207ENST00000490609 BMP8AQ7Z5Y6 402 aa17.6■□□□□ 0.41
COL2A1-207ENST00000490609 ECHDC2Q86YB7 292 aa17.6■□□□□ 0.41
COL2A1-207ENST00000490609 CKAP2LQ8IYA6 745 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms