RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 SYNPOQ8N3V7 929 aa5.73□□□□□ -1.49
HMGN1-218ENST00000490032 E2F7Q96AV8 911 aa5.73□□□□□ -1.49
HMGN1-218ENST00000490032 ACSS2Q9NR19 701 aa5.73□□□□□ -1.49
HMGN1-218ENST00000490032 PUF60Q9UHX1 559 aaKnown RBP5.73□□□□□ -1.49
HMGN1-218ENST00000490032 PPP1R12AO14974 1030 aaPredicted RBP5.72□□□□□ -1.49
HMGN1-218ENST00000490032 CDC14BO60729 498 aa5.72□□□□□ -1.49
HMGN1-218ENST00000490032 PRLP01236 227 aa5.72□□□□□ -1.49
HMGN1-218ENST00000490032 SDSP20132 328 aa5.72□□□□□ -1.49
HMGN1-218ENST00000490032 RPS19P39019 145 aaKnown RBP5.72□□□□□ -1.49
HMGN1-218ENST00000490032 MAP3K12Q12852 859 aa5.72□□□□□ -1.49
HMGN1-218ENST00000490032 PRKD1Q15139 912 aaPredicted RBP5.72□□□□□ -1.49
HMGN1-218ENST00000490032 CRIP3Q6Q6R5 217 aa5.72□□□□□ -1.49
HMGN1-218ENST00000490032 ERCC4Q92889 916 aaPredicted RBP5.72□□□□□ -1.49
HMGN1-218ENST00000490032 ORAI3Q9BRQ5 295 aa5.72□□□□□ -1.49
HMGN1-218ENST00000490032 PLA2G12BQ9BX93 195 aa5.72□□□□□ -1.49
HMGN1-218ENST00000490032 CABP5Q9NP86 173 aa5.72□□□□□ -1.49
HMGN1-218ENST00000490032 B4GALT6Q9UBX8 382 aa5.72□□□□□ -1.49
HMGN1-218ENST00000490032 VWA7Q9Y334 891 aa5.72□□□□□ -1.49
HMGN1-218ENST00000490032 PTPDC1A2A3K4 754 aa5.71□□□□□ -1.5
HMGN1-218ENST00000490032 CBX4O00257 560 aa5.71□□□□□ -1.5
HMGN1-218ENST00000490032 KRT37O76014 449 aa5.71□□□□□ -1.5
HMGN1-218ENST00000490032 ASMTLO95671 621 aa5.71□□□□□ -1.5
HMGN1-218ENST00000490032 CYP17A1P05093 508 aa5.71□□□□□ -1.5
HMGN1-218ENST00000490032 STAT5BP51692 787 aa5.71□□□□□ -1.5
HMGN1-218ENST00000490032 PABPC4Q13310 644 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGN1-218ENST00000490032 MAMDC4Q6UXC1 1216 aa5.71□□□□□ -1.5
HMGN1-218ENST00000490032 Q8N1X5 172 aa5.71□□□□□ -1.5
HMGN1-218ENST00000490032 C16orf92Q96LL3 132 aa5.71□□□□□ -1.5
HMGN1-218ENST00000490032 ADOQ96SZ5 270 aa5.71□□□□□ -1.5
HMGN1-218ENST00000490032 ZNF747Q9BV97 191 aa5.71□□□□□ -1.5
HMGN1-218ENST00000490032 C12orf65Q9H3J6 166 aaKnown RBP5.71□□□□□ -1.5
HMGN1-218ENST00000490032 INTS7Q9NVH2 962 aaKnown RBP5.71□□□□□ -1.5
HMGN1-218ENST00000490032 H7C1D1 291 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 AKAP8O43823 692 aaKnown RBP5.7□□□□□ -1.5
HMGN1-218ENST00000490032 C6P13671 934 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 TACR2P21452 398 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 FLT3P36888 993 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 ROM1Q03395 351 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 EPHA7Q15375 998 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 PIK3R6Q5UE93 754 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 CREB3L3Q68CJ9 461 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 CDCA2Q69YH5 1023 aaPredicted RBP5.7□□□□□ -1.5
HMGN1-218ENST00000490032 UBE2R2Q712K3 238 aaPredicted RBP5.7□□□□□ -1.5
HMGN1-218ENST00000490032 KIAA1958Q8N8K9 716 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 LPPQ93052 612 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 MAML3Q96JK9 1138 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 RNPC3Q96LT9 517 aaKnown RBP5.7□□□□□ -1.5
HMGN1-218ENST00000490032 OR14A2Q96R54 314 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 VPS11Q9H270 941 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 NELFAQ9H3P2 528 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 PCIF1Q9H4Z3 704 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 PIF1Q9H611 641 aa5.7□□□□□ -1.5
HMGN1-218ENST00000490032 MAGEC2Q9UBF1 373 aaPredicted RBP5.7□□□□□ -1.5
HMGN1-218ENST00000490032 CTDP1Q9Y5B0 961 aaPredicted RBP5.7□□□□□ -1.5
HMGN1-218ENST00000490032 SLC26A4O43511 780 aa5.69□□□□□ -1.5
HMGN1-218ENST00000490032 JMJD7P0C870 316 aa5.69□□□□□ -1.5
HMGN1-218ENST00000490032 ACO1P21399 889 aaKnown RBP5.69□□□□□ -1.5
HMGN1-218ENST00000490032 RANGAP1P46060 587 aaPredicted RBP5.69□□□□□ -1.5
HMGN1-218ENST00000490032 RGS3P49796 1198 aa5.69□□□□□ -1.5
HMGN1-218ENST00000490032 SESN2P58004 480 aaPredicted RBP5.69□□□□□ -1.5
HMGN1-218ENST00000490032 SLC6A3Q01959 620 aa5.69□□□□□ -1.5
HMGN1-218ENST00000490032 FOXL1Q12952 345 aa5.69□□□□□ -1.5
HMGN1-218ENST00000490032 KLHDC10Q6PID8 442 aa5.69□□□□□ -1.5
HMGN1-218ENST00000490032 NME9Q86XW9 330 aa5.69□□□□□ -1.5
HMGN1-218ENST00000490032 GPR135Q8IZ08 494 aa5.69□□□□□ -1.5
HMGN1-218ENST00000490032 OR14K1Q8NGZ2 314 aa5.69□□□□□ -1.5
HMGN1-218ENST00000490032 UBA6A0AVT1 1052 aaPredicted RBP5.68□□□□□ -1.5
HMGN1-218ENST00000490032 AMHP03971 560 aa5.68□□□□□ -1.5
HMGN1-218ENST00000490032 TCEA2Q15560 299 aa5.68□□□□□ -1.5
HMGN1-218ENST00000490032 ZNF174Q15697 407 aa5.68□□□□□ -1.5
HMGN1-218ENST00000490032 TTC38Q5R3I4 469 aa5.68□□□□□ -1.5
HMGN1-218ENST00000490032 SLFN12LQ6IEE8 588 aa5.68□□□□□ -1.5
HMGN1-218ENST00000490032 RNF207Q6ZRF8 634 aa5.68□□□□□ -1.5
HMGN1-218ENST00000490032 SLC16A11Q8NCK7 471 aa5.68□□□□□ -1.5
HMGN1-218ENST00000490032 OR5AN1Q8NGI8 311 aa5.68□□□□□ -1.5
HMGN1-218ENST00000490032 FAM89AQ96GI7 184 aa5.68□□□□□ -1.5
HMGN1-218ENST00000490032 PLA2G3Q9NZ20 509 aa5.68□□□□□ -1.5
HMGN1-218ENST00000490032 SAE1Q9UBE0 346 aaPredicted RBP5.68□□□□□ -1.5
HMGN1-218ENST00000490032 FAM184BQ9ULE4 1060 aa5.68□□□□□ -1.5
HMGN1-218ENST00000490032 FAM83GA6ND36 823 aa5.67□□□□□ -1.5
HMGN1-218ENST00000490032 POU3F2P20265 443 aaPredicted RBP5.67□□□□□ -1.5
HMGN1-218ENST00000490032 PTX3P26022 381 aaPredicted RBP5.67□□□□□ -1.5
HMGN1-218ENST00000490032 ACVRL1P37023 503 aa5.67□□□□□ -1.5
HMGN1-218ENST00000490032 ANTXR2P58335 489 aa5.67□□□□□ -1.5
HMGN1-218ENST00000490032 ADAM15Q13444 863 aa5.67□□□□□ -1.5
HMGN1-218ENST00000490032 DGKDQ16760 1214 aa5.67□□□□□ -1.5
HMGN1-218ENST00000490032 CFAP100Q494V2 611 aa5.67□□□□□ -1.5
HMGN1-218ENST00000490032 KIF18BQ86Y91 864 aa5.67□□□□□ -1.5
HMGN1-218ENST00000490032 HOMER1Q86YM7 354 aa5.67□□□□□ -1.5
HMGN1-218ENST00000490032 SHCBP1Q8NEM2 672 aa5.67□□□□□ -1.5
HMGN1-218ENST00000490032 RABGGTAQ92696 567 aa5.67□□□□□ -1.5
HMGN1-218ENST00000490032 NKD2Q969F2 451 aaPredicted RBP5.67□□□□□ -1.5
HMGN1-218ENST00000490032 GFM2Q969S9 779 aaKnown RBP5.67□□□□□ -1.5
HMGN1-218ENST00000490032 HAPLN2Q9GZV7 340 aa5.67□□□□□ -1.5
HMGN1-218ENST00000490032 AGO3Q9H9G7 860 aaKnown RBP5.67□□□□□ -1.5
HMGN1-218ENST00000490032 KCMF1Q9P0J7 381 aa5.67□□□□□ -1.5
HMGN1-218ENST00000490032 SPO11Q9Y5K1 396 aa5.67□□□□□ -1.5
HMGN1-218ENST00000490032 PLSCR1O15162 318 aa5.66□□□□□ -1.5
HMGN1-218ENST00000490032 H2AFYO75367 372 aaKnown RBP5.66□□□□□ -1.5
HMGN1-218ENST00000490032 FSHBP01225 129 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms