RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 SEMA6BQ9H3T3 888 aa23.94■■□□□ 1.42
SMC4-221ENST00000489573 ATP6V0A4Q9HBG4 840 aa23.94■■□□□ 1.42
SMC4-221ENST00000489573 LARSQ9P2J5 1176 aaKnown RBP23.94■■□□□ 1.42
SMC4-221ENST00000489573 GABRQQ9UN88 632 aa23.94■■□□□ 1.42
SMC4-221ENST00000489573 MYBP10242 640 aa23.93■■□□□ 1.42
SMC4-221ENST00000489573 FANCCQ00597 558 aa23.93■■□□□ 1.42
SMC4-221ENST00000489573 FAM102BQ5T8I3 360 aa23.93■■□□□ 1.42
SMC4-221ENST00000489573 ANKRD40Q6AI12 368 aa23.93■■□□□ 1.42
SMC4-221ENST00000489573 FOXR2Q6PJQ5 311 aa23.93■■□□□ 1.42
SMC4-221ENST00000489573 FAM178BQ8IXR5 827 aa23.93■■□□□ 1.42
SMC4-221ENST00000489573 NOC3LQ8WTT2 800 aaKnown RBP23.93■■□□□ 1.42
SMC4-221ENST00000489573 BBXQ8WY36 941 aaPredicted RBP23.93■■□□□ 1.42
SMC4-221ENST00000489573 TSG101Q99816 390 aa23.93■■□□□ 1.42
SMC4-221ENST00000489573 DUSP9Q99956 384 aaKnown RBP23.93■■□□□ 1.42
SMC4-221ENST00000489573 GCNT3O95395 438 aa23.92■■□□□ 1.42
SMC4-221ENST00000489573 PLS3P13797 630 aa23.92■■□□□ 1.42
SMC4-221ENST00000489573 CDK11BP21127 795 aaKnown RBP23.92■■□□□ 1.42
SMC4-221ENST00000489573 FLT3LGP49771 235 aa23.92■■□□□ 1.42
SMC4-221ENST00000489573 PRKCZQ05513 592 aa23.92■■□□□ 1.42
SMC4-221ENST00000489573 LRRC63Q05C16 580 aa23.92■■□□□ 1.42
SMC4-221ENST00000489573 BMT2Q1RMZ1 405 aa23.92■■□□□ 1.42
SMC4-221ENST00000489573 HSP90AA4PQ58FG1 418 aa23.92■■□□□ 1.42
SMC4-221ENST00000489573 ATP8B4Q8TF62 1192 aa23.92■■□□□ 1.42
SMC4-221ENST00000489573 FIZ1Q96SL8 496 aa23.92■■□□□ 1.42
SMC4-221ENST00000489573 PDLIM7Q9NR12 457 aa23.92■■□□□ 1.42
SMC4-221ENST00000489573 NRBP1Q9UHY1 535 aa23.92■■□□□ 1.42
SMC4-221ENST00000489573 PPME1Q9Y570 386 aa23.92■■□□□ 1.42
SMC4-221ENST00000489573 UBE4BO95155 1302 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 EIF3DO15371 548 aaKnown RBP eCLIP23.91■■□□□ 1.422e-16■■■■■ 56.2
SMC4-221ENST00000489573 ADCY6O43306 1168 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 LGALS2P05162 132 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 MARK3P27448 753 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 NMT1P30419 496 aaKnown RBP23.91■■□□□ 1.42
SMC4-221ENST00000489573 POLGP54098 1239 aaPredicted RBP23.91■■□□□ 1.42
SMC4-221ENST00000489573 TARBP2Q15633 366 aaKnown RBP23.91■■□□□ 1.42
SMC4-221ENST00000489573 STXBP4Q6ZWJ1 553 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 NELFCDQ8IXH7 590 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 CSGALNACT2Q8N6G5 542 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 KIFAP3Q92845 792 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 GPRC5CQ9NQ84 441 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 XPNPEP1Q9NQW7 623 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 GNEQ9Y223 722 aaKnown RBP23.91■■□□□ 1.42
SMC4-221ENST00000489573 SERPINC1P01008 464 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 MAPTP10636 758 aaKnown RBP23.91■■□□□ 1.42
SMC4-221ENST00000489573 RFC5P40937 340 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 EMC2Q15006 297 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 PLCB4Q15147 1175 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 MFSD14CQ5VZR4 134 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 MRFAP1L1Q96HT8 127 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 CEP89Q96ST8 783 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 THAP9Q9H5L6 903 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 IFNKQ9P0W0 207 aa23.91■■□□□ 1.42
SMC4-221ENST00000489573 PRPF6O94906 941 aaKnown RBP23.9■■□□□ 1.42
SMC4-221ENST00000489573 MMP3P08254 477 aa23.9■■□□□ 1.42
SMC4-221ENST00000489573 HOXD8P13378 290 aaPredicted RBP23.9■■□□□ 1.42
SMC4-221ENST00000489573 SPAG1Q07617 926 aa23.9■■□□□ 1.42
SMC4-221ENST00000489573 ZNF720Q7Z2F6 126 aa23.9■■□□□ 1.42
SMC4-221ENST00000489573 ZNF507Q8TCN5 953 aa23.9■■□□□ 1.42
SMC4-221ENST00000489573 TRIB2Q92519 343 aa23.9■■□□□ 1.42
SMC4-221ENST00000489573 SRRTQ9BXP5 876 aaKnown RBP23.9■■□□□ 1.42
SMC4-221ENST00000489573 DHX33Q9H6R0 707 aaKnown RBP23.9■■□□□ 1.42
SMC4-221ENST00000489573 ERAP1Q9NZ08 941 aa23.9■■□□□ 1.42
SMC4-221ENST00000489573 FAM184BQ9ULE4 1060 aa23.9■■□□□ 1.42
SMC4-221ENST00000489573 K7ENM7 598 aa23.89■■□□□ 1.41
SMC4-221ENST00000489573 PPFIA4O75335 1185 aa23.89■■□□□ 1.41
SMC4-221ENST00000489573 CAP1Q01518 475 aa23.89■■□□□ 1.41
SMC4-221ENST00000489573 KNOP1Q1ED39 458 aaKnown RBP23.89■■□□□ 1.41
SMC4-221ENST00000489573 ZCWPW2Q504Y3 356 aa23.89■■□□□ 1.41
SMC4-221ENST00000489573 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.89■■□□□ 1.41
SMC4-221ENST00000489573 SLC7A3Q8WY07 619 aa23.89■■□□□ 1.41
SMC4-221ENST00000489573 KCTD10Q9H3F6 313 aa23.89■■□□□ 1.41
SMC4-221ENST00000489573 C17orf75Q9HAS0 396 aa23.89■■□□□ 1.41
SMC4-221ENST00000489573 CBFA2T2O43439 604 aa23.88■■□□□ 1.41
SMC4-221ENST00000489573 CDC25BP30305 580 aa23.88■■□□□ 1.41
SMC4-221ENST00000489573 RTP1P59025 263 aa23.88■■□□□ 1.41
SMC4-221ENST00000489573 ALCAMQ13740 583 aa23.88■■□□□ 1.41
SMC4-221ENST00000489573 PPP4R3CPQ6ZMV5 832 aa23.88■■□□□ 1.41
SMC4-221ENST00000489573 TLK2Q86UE8 772 aa23.88■■□□□ 1.41
SMC4-221ENST00000489573 SLC17A8Q8NDX2 589 aa23.88■■□□□ 1.41
SMC4-221ENST00000489573 CD99L2Q8TCZ2 262 aa23.88■■□□□ 1.41
SMC4-221ENST00000489573 XPO4Q9C0E2 1151 aaKnown RBP23.88■■□□□ 1.41
SMC4-221ENST00000489573 TRPC6Q9Y210 931 aa23.88■■□□□ 1.41
SMC4-221ENST00000489573 PCDHB13Q9Y5F0 798 aa23.88■■□□□ 1.41
SMC4-221ENST00000489573 MYH11P35749 1972 aa23.88■■□□□ 1.41
SMC4-221ENST00000489573 GPR25O00155 361 aa23.87■■□□□ 1.41
SMC4-221ENST00000489573 DYNC1LI2O43237 492 aaPredicted RBP23.87■■□□□ 1.41
SMC4-221ENST00000489573 HBP1O60381 514 aa23.87■■□□□ 1.41
SMC4-221ENST00000489573 FGFR1OPO95684 399 aaKnown RBP23.87■■□□□ 1.41
SMC4-221ENST00000489573 HOXD10P28358 340 aa23.87■■□□□ 1.41
SMC4-221ENST00000489573 UBASH3AP57075 661 aa23.87■■□□□ 1.41
SMC4-221ENST00000489573 DMP1Q13316 513 aaPredicted RBP23.87■■□□□ 1.41
SMC4-221ENST00000489573 DGKDQ16760 1214 aa23.87■■□□□ 1.41
SMC4-221ENST00000489573 ANKRD20A12PQ8NF67 263 aa23.87■■□□□ 1.41
SMC4-221ENST00000489573 POLR3FQ9H1D9 316 aaPredicted RBP23.87■■□□□ 1.41
SMC4-221ENST00000489573 SAGE1Q9NXZ1 904 aa23.87■■□□□ 1.41
SMC4-221ENST00000489573 ZNF215Q9UL58 517 aaPredicted RBP23.87■■□□□ 1.41
SMC4-221ENST00000489573 Q9Y3F1 56 aa23.87■■□□□ 1.41
SMC4-221ENST00000489573 CASP8AP2Q9UKL3 1982 aa23.87■■□□□ 1.41
SMC4-221ENST00000489573 KCNJ18B7U540 433 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 PPP1R37O75864 691 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms