RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 AKT3Q9Y243 479 aa11.79□□□□□ -0.52
CHKB-211ENST00000489453 SAMM50Q9Y512 469 aa11.79□□□□□ -0.52
CHKB-211ENST00000489453 MYO10Q9HD67 2058 aa11.79□□□□□ -0.52
CHKB-211ENST00000489453 IGKV6D-21A0A0A0MT36 114 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 CCDC196A0A1B0GTZ2 297 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 C9IYK1 514 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 IPO5O00410 1097 aaKnown RBP11.78□□□□□ -0.52
CHKB-211ENST00000489453 HOXA2O43364 376 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 VTNP04004 478 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 PSAPP07602 524 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 FGFR1P11362 822 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 ZSCAN20P17040 1043 aaPredicted RBP11.78□□□□□ -0.52
CHKB-211ENST00000489453 TMOD1P28289 359 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 PTPN5P54829 565 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 ZXDAP98168 799 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 KRT32Q14532 448 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 DUSP6Q16828 381 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 FAM102BQ5T8I3 360 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 MCTP2Q6DN12 878 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 ZNF746Q6NUN9 644 aaPredicted RBP11.78□□□□□ -0.52
CHKB-211ENST00000489453 DHX32Q7L7V1 743 aaKnown RBP11.78□□□□□ -0.52
CHKB-211ENST00000489453 FAM228AQ86W67 206 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 SMAP1Q8IYB5 467 aaPredicted RBP11.78□□□□□ -0.52
CHKB-211ENST00000489453 BBXQ8WY36 941 aaPredicted RBP11.78□□□□□ -0.52
CHKB-211ENST00000489453 FAM167AQ96KS9 214 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 PRRX2Q99811 253 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 CDHR5Q9HBB8 845 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 C6orf50Q9HD87 102 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 TBC1D22BQ9NU19 505 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 TYW1Q9NV66 732 aaKnown RBP11.78□□□□□ -0.52
CHKB-211ENST00000489453 TMEM161AQ9NX61 479 aa11.78□□□□□ -0.52
CHKB-211ENST00000489453 FAM86B1E9PN63 330 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 MAGEB2O15479 319 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 C22orf31O95567 290 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 FAM86B2P0C5J1 330 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 ATF7P17544 494 aaPredicted RBP11.77□□□□□ -0.53
CHKB-211ENST00000489453 CA8P35219 290 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 PPM1AP35813 382 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 TECP42680 631 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 CLK2P49760 499 aaKnown RBP11.77□□□□□ -0.53
CHKB-211ENST00000489453 METAP2P50579 478 aaKnown RBP eCLIP11.77□□□□□ -0.53
CHKB-211ENST00000489453 ERVFC1P60507 584 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 AKAP17AQ02040 695 aaKnown RBP11.77□□□□□ -0.53
CHKB-211ENST00000489453 KRT17Q04695 432 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 LLGL2Q6P1M3 1020 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 REXO1Q8N1G1 1221 aaKnown RBP11.77□□□□□ -0.53
CHKB-211ENST00000489453 LRRC43Q8N309 656 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 RNF169Q8NCN4 708 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 TMEM40Q8WWA1 233 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 TCF25Q9BQ70 676 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 TMEM117Q9H0C3 514 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 ELAC1Q9H777 363 aaKnown RBP11.77□□□□□ -0.53
CHKB-211ENST00000489453 HCSTQ9UBK5 93 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 GABBR1Q9UBS5 961 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 BRPF3Q9ULD4 1205 aa11.77□□□□□ -0.53
CHKB-211ENST00000489453 ZDBF2Q9HCK1 2354 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 ZBTB42B2RXF5 422 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 CYP3A4P08684 503 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 HMGB1P09429 215 aaKnown RBP11.76□□□□□ -0.53
CHKB-211ENST00000489453 GNA11P29992 359 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 CLCN3P51790 818 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 RCAN1P53805 252 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 APOBRQ0VD83 1088 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 FUT2Q10981 343 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 BMS1Q14692 1282 aaKnown RBP11.76□□□□□ -0.53
CHKB-211ENST00000489453 CBX2Q14781 532 aaPredicted RBP11.76□□□□□ -0.53
CHKB-211ENST00000489453 PFKFB3Q16875 520 aaPredicted RBP11.76□□□□□ -0.53
CHKB-211ENST00000489453 PRR16Q569H4 304 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 BMP8AQ7Z5Y6 402 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 BICD2Q8TD16 824 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 MRPS27Q92552 414 aaKnown RBP11.76□□□□□ -0.53
CHKB-211ENST00000489453 ZNF558Q96NG5 402 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 CWH43Q9H720 699 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 LZTS1Q9Y250 596 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 PCDHA10Q9Y5I2 948 aa11.76□□□□□ -0.53
CHKB-211ENST00000489453 MAFBQ9Y5Q3 323 aaPredicted RBP11.76□□□□□ -0.53
CHKB-211ENST00000489453 IGLV3-22A0A075B6J6 115 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 WDR64B1ANS9 1081 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 FSCN2O14926 492 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 DHX15O43143 795 aaKnown RBP11.75□□□□□ -0.53
CHKB-211ENST00000489453 GPR32O75388 356 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 NLRP11P59045 1033 aaKnown RBP11.75□□□□□ -0.53
CHKB-211ENST00000489453 RBM10P98175 930 aaKnown RBP11.75□□□□□ -0.53
CHKB-211ENST00000489453 EXOSC10Q01780 885 aaKnown RBP11.75□□□□□ -0.53
CHKB-211ENST00000489453 PLCB3Q01970 1234 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 SIGLEC14Q08ET2 396 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 EFCAB12Q6NXP0 572 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 ANKRD54Q6NXT1 300 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 KCNT2Q6UVM3 1135 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 TMC7Q7Z402 723 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 ZNF710Q8N1W2 664 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 FBXL6Q8N531 539 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 TMEM87AQ8NBN3 555 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 PRSS33Q8NF86 280 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 APOL5Q9BWW9 433 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 NGRNQ9NPE2 291 aaKnown RBP11.75□□□□□ -0.53
CHKB-211ENST00000489453 TSHZ2Q9NRE2 1034 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 NRBP2Q9NSY0 501 aa11.75□□□□□ -0.53
CHKB-211ENST00000489453 NR2E1Q9Y466 385 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms