RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 VTNP04004 478 aa15.99■□□□□ 0.15
BRCA1-218ENST00000489037 OR52Z1P0C646 297 aa15.99■□□□□ 0.15
BRCA1-218ENST00000489037 TARBP2Q15633 366 aaKnown RBP15.99■□□□□ 0.15
BRCA1-218ENST00000489037 KIZQ2M2Z5 673 aa15.99■□□□□ 0.15
BRCA1-218ENST00000489037 TMEM266Q2M3C6 531 aa15.99■□□□□ 0.15
BRCA1-218ENST00000489037 LARP1BQ659C4 914 aaKnown RBP15.99■□□□□ 0.15
BRCA1-218ENST00000489037 TMCO2Q7Z6W1 182 aaPredicted RBP15.99■□□□□ 0.15
BRCA1-218ENST00000489037 TOP1MTQ969P6 601 aa15.99■□□□□ 0.15
BRCA1-218ENST00000489037 CEP170P1Q96L14 293 aa15.99■□□□□ 0.15
BRCA1-218ENST00000489037 CCDC43Q96MW1 224 aaKnown RBP15.99■□□□□ 0.15
BRCA1-218ENST00000489037 PPP1R16BQ96T49 567 aa15.99■□□□□ 0.15
BRCA1-218ENST00000489037 EIF2AK1Q9BQI3 630 aaKnown RBP15.99■□□□□ 0.15
BRCA1-218ENST00000489037 AGO3Q9H9G7 860 aaKnown RBP15.99■□□□□ 0.15
BRCA1-218ENST00000489037 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
BRCA1-218ENST00000489037 PADI3Q9ULW8 664 aa15.99■□□□□ 0.15
BRCA1-218ENST00000489037 LAMA2P24043 3122 aaKnown RBP15.99■□□□□ 0.15
BRCA1-218ENST00000489037 WNT7AO00755 349 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 ENPP3O14638 875 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 STBD1O95210 358 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 YWHABP31946 246 aaKnown RBP15.98■□□□□ 0.15
BRCA1-218ENST00000489037 NLRP11P59045 1033 aaKnown RBP15.98■□□□□ 0.15
BRCA1-218ENST00000489037 CYP4A11Q02928 519 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 SPIRE1Q08AE8 756 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 CTTNQ14247 550 aaKnown RBP15.98■□□□□ 0.15
BRCA1-218ENST00000489037 ANO5Q75V66 913 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 ERMNQ8TAM6 284 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 NLRP7Q8WX94 980 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 SLC7A3Q8WY07 619 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 YME1L1Q96TA2 773 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 OSMRQ99650 979 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 TMEM60Q9H2L4 133 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 PRDM12Q9H4Q4 367 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 CYP26B1Q9NR63 512 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 RGL1Q9NZL6 768 aa15.98■□□□□ 0.15
BRCA1-218ENST00000489037 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-218ENST00000489037 TMEM150BA6NC51 233 aa15.97■□□□□ 0.15
BRCA1-218ENST00000489037 MAFO75444 373 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-218ENST00000489037 SLITRK3O94933 977 aa15.97■□□□□ 0.15
BRCA1-218ENST00000489037 RFC5P40937 340 aa15.97■□□□□ 0.15
BRCA1-218ENST00000489037 TECP42680 631 aa15.97■□□□□ 0.15
BRCA1-218ENST00000489037 POLGP54098 1239 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-218ENST00000489037 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-218ENST00000489037 XKR9Q5GH70 373 aa15.97■□□□□ 0.15
BRCA1-218ENST00000489037 PLA2G4FQ68DD2 849 aa15.97■□□□□ 0.15
BRCA1-218ENST00000489037 LINC01465Q8N7H1 131 aa15.97■□□□□ 0.15
BRCA1-218ENST00000489037 SH2D3AQ9BRG2 576 aa15.97■□□□□ 0.15
BRCA1-218ENST00000489037 RAB34Q9BZG1 259 aa15.97■□□□□ 0.15
BRCA1-218ENST00000489037 CDHR5Q9HBB8 845 aa15.97■□□□□ 0.15
BRCA1-218ENST00000489037 NOC2LQ9Y3T9 749 aaKnown RBP15.97■□□□□ 0.15
BRCA1-218ENST00000489037 DENND3A2RUS2 1198 aa15.96■□□□□ 0.15
BRCA1-218ENST00000489037 GAS2O43903 313 aaKnown RBP15.96■□□□□ 0.15
BRCA1-218ENST00000489037 GPR32O75388 356 aa15.96■□□□□ 0.15
BRCA1-218ENST00000489037 STAG3L1P0CL83 205 aa15.96■□□□□ 0.15
BRCA1-218ENST00000489037 PDCP20941 246 aa15.96■□□□□ 0.15
BRCA1-218ENST00000489037 NPEPPSP55786 919 aa15.96■□□□□ 0.15
BRCA1-218ENST00000489037 TAP1Q03518 808 aa15.96■□□□□ 0.15
BRCA1-218ENST00000489037 CUL4AQ13619 759 aa15.96■□□□□ 0.15
BRCA1-218ENST00000489037 RILPL1Q5EBL4 403 aa15.96■□□□□ 0.15
BRCA1-218ENST00000489037 TCP11Q8WWU5 503 aa15.96■□□□□ 0.15
BRCA1-218ENST00000489037 GCOM2Q9BZD3 368 aaPredicted RBP15.96■□□□□ 0.15
BRCA1-218ENST00000489037 INO80BQ9C086 356 aaPredicted RBP15.96■□□□□ 0.15
BRCA1-218ENST00000489037 ERVK-5Q9HDB9 667 aa15.96■□□□□ 0.15
BRCA1-218ENST00000489037 SUCLA2Q9P2R7 463 aaPredicted RBP15.96■□□□□ 0.15
BRCA1-218ENST00000489037 LRFN2Q9ULH4 789 aa15.96■□□□□ 0.15
BRCA1-218ENST00000489037 ST3GAL5Q9UNP4 418 aa15.96■□□□□ 0.15
BRCA1-218ENST00000489037 STK24Q9Y6E0 443 aa15.96■□□□□ 0.15
BRCA1-218ENST00000489037 IGKV6-21A0A0C4DH24 114 aa15.95■□□□□ 0.14
BRCA1-218ENST00000489037 POTEMA6NI47 508 aa15.95■□□□□ 0.14
BRCA1-218ENST00000489037 LAD1O00515 517 aa15.95■□□□□ 0.14
BRCA1-218ENST00000489037 ZSCAN20P17040 1043 aaPredicted RBP15.95■□□□□ 0.14
BRCA1-218ENST00000489037 IGFBP4P22692 258 aa15.95■□□□□ 0.14
BRCA1-218ENST00000489037 EIF4BP23588 611 aaKnown RBP15.95■□□□□ 0.14
BRCA1-218ENST00000489037 GPC3P51654 580 aa15.95■□□□□ 0.14
BRCA1-218ENST00000489037 HTRA4P83105 476 aaPredicted RBP15.95■□□□□ 0.14
BRCA1-218ENST00000489037 RHPN2Q8IUC4 686 aa15.95■□□□□ 0.14
BRCA1-218ENST00000489037 ARNTL2Q8WYA1 636 aa15.95■□□□□ 0.14
BRCA1-218ENST00000489037 TGS1Q96RS0 853 aaKnown RBP15.95■□□□□ 0.14
BRCA1-218ENST00000489037 HSD17B14Q9BPX1 270 aa15.95■□□□□ 0.14
BRCA1-218ENST00000489037 TSPYL2Q9H2G4 693 aaPredicted RBP15.95■□□□□ 0.14
BRCA1-218ENST00000489037 CERS4Q9HA82 394 aa15.95■□□□□ 0.14
BRCA1-218ENST00000489037 TUFT1Q9NNX1 390 aa15.95■□□□□ 0.14
BRCA1-218ENST00000489037 C1orf112Q9NSG2 853 aa15.95■□□□□ 0.14
BRCA1-218ENST00000489037 ANKEF1Q9NU02 776 aa15.95■□□□□ 0.14
BRCA1-218ENST00000489037 ARID2Q68CP9 1835 aa15.95■□□□□ 0.14
BRCA1-218ENST00000489037 LCHNA4D1U4 455 aa15.94■□□□□ 0.14
BRCA1-218ENST00000489037 GTPBP6O43824 516 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-218ENST00000489037 LYPLA2O95372 231 aa15.94■□□□□ 0.14
BRCA1-218ENST00000489037 XRCC6P12956 609 aaKnown RBP eCLIP15.94■□□□□ 0.14
BRCA1-218ENST00000489037 PTGDRQ13258 359 aa15.94■□□□□ 0.14
BRCA1-218ENST00000489037 HAUS3Q68CZ6 603 aa15.94■□□□□ 0.14
BRCA1-218ENST00000489037 ZNF410Q86VK4 478 aa15.94■□□□□ 0.14
BRCA1-218ENST00000489037 FAM228AQ86W67 206 aa15.94■□□□□ 0.14
BRCA1-218ENST00000489037 NPAS4Q8IUM7 802 aa15.94■□□□□ 0.14
BRCA1-218ENST00000489037 MAFAQ8NHW3 353 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-218ENST00000489037 TMEM40Q8WWA1 233 aa15.94■□□□□ 0.14
BRCA1-218ENST00000489037 PSPC1Q8WXF1 523 aaKnown RBP15.94■□□□□ 0.14
BRCA1-218ENST00000489037 SAMD11Q96NU1 681 aa15.94■□□□□ 0.14
BRCA1-218ENST00000489037 CEP89Q96ST8 783 aa15.94■□□□□ 0.14
BRCA1-218ENST00000489037 MTRQ99707 1265 aa15.94■□□□□ 0.14
BRCA1-218ENST00000489037 ADAMTS10Q9H324 1103 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms