RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 EPHA7Q15375 998 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 FRMD5Q7Z6J6 570 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 AKT1S1Q96B36 256 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 HOMER2Q9NSB8 354 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 NAGPAQ9UK23 515 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 RBBP6Q7Z6E9 1792 aaKnown RBP13.85□□□□□ -0.19
CLIC4-202ENST00000488683 ZMYM2Q9UBW7 1377 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 CENPFP49454 3210 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 BACH1O14867 736 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 CALCAP01258 141 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 DLG4P78352 724 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 HLTFQ14527 1009 aaKnown RBP eCLIP13.85□□□□□ -0.19
CLIC4-202ENST00000488683 RBM26Q5T8P6 1007 aaKnown RBP13.85□□□□□ -0.19
CLIC4-202ENST00000488683 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 INPP4AQ96PE3 977 aaPredicted RBP13.85□□□□□ -0.19
CLIC4-202ENST00000488683 TMX4Q9H1E5 349 aaPredicted RBP13.85□□□□□ -0.19
CLIC4-202ENST00000488683 VEZTQ9HBM0 779 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 ZNF233A6NK53 670 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 DDX3XO00571 662 aaKnown RBP eCLIP13.84□□□□□ -0.191e-21■■■■■ 50.4
CLIC4-202ENST00000488683 SLC26A4O43511 780 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 C21orf2O43822 256 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 SORBS3O60504 671 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 GNGT1P63211 74 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 ZNF211Q13398 564 aaPredicted RBP13.84□□□□□ -0.19
CLIC4-202ENST00000488683 LRCH2Q5VUJ6 765 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 CPNE8Q86YQ8 564 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 PIK3R5Q8WYR1 880 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 FAM20AQ96MK3 541 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 MRIQ9BWK5 157 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.84□□□□□ -0.19
CLIC4-202ENST00000488683 PDXKO00764 312 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 FAM13AO94988 1023 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 ERVK-9P63128 1117 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 GUCY1A3Q02108 690 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 PRPF4BQ13523 1007 aaKnown RBP13.84□□□□□ -0.19
CLIC4-202ENST00000488683 ZNF746Q6NUN9 644 aaPredicted RBP13.84□□□□□ -0.19
CLIC4-202ENST00000488683 METTL13Q8N6R0 699 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 LNX1Q8TBB1 728 aaPredicted RBP13.84□□□□□ -0.19
CLIC4-202ENST00000488683 FAM107BQ9H098 131 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 AMACRQ9UHK6 382 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 SHTN1A0MZ66 631 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 FOSP01100 380 aaPredicted RBP13.84□□□□□ -0.19
CLIC4-202ENST00000488683 IRAK1P51617 712 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 EPHB4P54760 987 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 BMT2Q1RMZ1 405 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 HOOK2Q96ED9 719 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 TMEM39BQ9GZU3 492 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 DPH5Q9H2P9 285 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 PLCB1Q9NQ66 1216 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 TYW1Q9NV66 732 aaKnown RBP13.84□□□□□ -0.19
CLIC4-202ENST00000488683 SERPINA10Q9UK55 444 aa13.84□□□□□ -0.19
CLIC4-202ENST00000488683 EVI5O60447 810 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 EYA4O95677 639 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 HPDP32754 393 aaPredicted RBP13.83□□□□□ -0.2
CLIC4-202ENST00000488683 RPS6KA1Q15418 735 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 BTNL9Q6UXG8 535 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 OTOP1Q7RTM1 612 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 DAAM2Q86T65 1068 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 USP38Q8NB14 1042 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 ARHGEF26Q96DR7 871 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 AGBL1Q96MI9 1066 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 HSD17B14Q9BPX1 270 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 TSKSQ9UJT2 592 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 ATRNL1Q5VV63 1379 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 CALUO43852 315 aaPredicted RBP13.83□□□□□ -0.2
CLIC4-202ENST00000488683 RPS6KA5O75582 802 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 KIF4AO95239 1232 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 HDLBPQ00341 1268 aaKnown RBP13.83□□□□□ -0.2
CLIC4-202ENST00000488683 NNTQ13423 1086 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 FAM186BQ8IYM0 893 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 IL31RAQ8NI17 732 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 RUFY1Q96T51 708 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 POLR3CQ9BUI4 534 aaPredicted RBP13.83□□□□□ -0.2
CLIC4-202ENST00000488683 UNC45AQ9H3U1 944 aa13.83□□□□□ -0.2
CLIC4-202ENST00000488683 MYH11P35749 1972 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 TMEM110-MUSTN1A8MSY1 372 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 ATMINO43313 823 aaPredicted RBP13.82□□□□□ -0.2
CLIC4-202ENST00000488683 HSF2BPO75031 334 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 CYP3A4P08684 503 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 EPB41P11171 864 aaKnown RBP13.82□□□□□ -0.2
CLIC4-202ENST00000488683 STAT2P52630 851 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 UBAP2Q5T6F2 1119 aaKnown RBP13.82□□□□□ -0.2
CLIC4-202ENST00000488683 MAATS1Q7Z4T9 603 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 SLC20A1Q8WUM9 679 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 KAT5Q92993 513 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 BORCS6Q96GS4 357 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 LUC7LQ9NQ29 371 aaKnown RBP13.82□□□□□ -0.2
CLIC4-202ENST00000488683 GDF3Q9NR23 364 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 GRIN2DO15399 1336 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 GALCP54803 685 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 JAM2P57087 298 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 DRAP1Q14919 205 aaPredicted RBP13.82□□□□□ -0.2
CLIC4-202ENST00000488683 GRIPAP1Q4V328 841 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 ODR4Q5SWX8 454 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 GBP6Q6ZN66 633 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 CPXCR1Q8N123 301 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 OLIG1Q8TAK6 271 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 BCAS4Q8TDM0 211 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 RUBCNQ92622 972 aa13.82□□□□□ -0.2
CLIC4-202ENST00000488683 TAF4BQ92750 862 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms