RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 NAALADL2Q58DX5 795 aa25.49■■□□□ 1.67
PTPN4-211ENST00000488279 SLC24A5Q71RS6 500 aa25.49■■□□□ 1.67
PTPN4-211ENST00000488279 RDM1Q8NG50 284 aa25.49■■□□□ 1.67
PTPN4-211ENST00000488279 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.49■■□□□ 1.67
PTPN4-211ENST00000488279 P2RX5Q93086 422 aa25.49■■□□□ 1.67
PTPN4-211ENST00000488279 PLAGL2Q9UPG8 496 aa25.49■■□□□ 1.67
PTPN4-211ENST00000488279 AKT3Q9Y243 479 aa25.49■■□□□ 1.67
PTPN4-211ENST00000488279 NONOQ15233 471 aaKnown RBP eCLIP25.48■■□□□ 1.67
PTPN4-211ENST00000488279 NPY5RQ15761 445 aa25.48■■□□□ 1.67
PTPN4-211ENST00000488279 PUS10Q3MIT2 529 aaKnown RBP25.48■■□□□ 1.67
PTPN4-211ENST00000488279 ERICH6BQ5W0A0 696 aa25.48■■□□□ 1.67
PTPN4-211ENST00000488279 MOXD1Q6UVY6 613 aa25.48■■□□□ 1.67
PTPN4-211ENST00000488279 EP400NLQ6ZTU2 488 aa25.48■■□□□ 1.67
PTPN4-211ENST00000488279 KRT25Q7Z3Z0 450 aa25.48■■□□□ 1.67
PTPN4-211ENST00000488279 NEK9Q8TD19 979 aa25.48■■□□□ 1.67
PTPN4-211ENST00000488279 ALG13Q9NP73 1137 aaKnown RBP25.48■■□□□ 1.67
PTPN4-211ENST00000488279 KCNJ14Q9UNX9 436 aa25.48■■□□□ 1.67
PTPN4-211ENST00000488279 XBP1P17861 261 aa25.47■■□□□ 1.67
PTPN4-211ENST00000488279 NLRP11P59045 1033 aaKnown RBP25.47■■□□□ 1.67
PTPN4-211ENST00000488279 ANAPC15P60006 121 aa25.47■■□□□ 1.67
PTPN4-211ENST00000488279 UGCGQ16739 394 aa25.47■■□□□ 1.67
PTPN4-211ENST00000488279 PTCRAQ6ISU1 281 aaPredicted RBP25.47■■□□□ 1.67
PTPN4-211ENST00000488279 MIER3Q7Z3K6 550 aa25.47■■□□□ 1.67
PTPN4-211ENST00000488279 FAM228AQ86W67 206 aa25.47■■□□□ 1.67
PTPN4-211ENST00000488279 LRRC71Q8N4P6 559 aa25.47■■□□□ 1.67
PTPN4-211ENST00000488279 MBOAT7Q96N66 472 aa25.47■■□□□ 1.67
PTPN4-211ENST00000488279 TPCN1Q9ULQ1 816 aa25.47■■□□□ 1.67
PTPN4-211ENST00000488279 C9IYK1 514 aa25.46■■□□□ 1.67
PTPN4-211ENST00000488279 H3BQ06 376 aaPredicted RBP25.46■■□□□ 1.67
PTPN4-211ENST00000488279 PFKFB2O60825 505 aa25.46■■□□□ 1.67
PTPN4-211ENST00000488279 MMP1P03956 469 aa25.46■■□□□ 1.67
PTPN4-211ENST00000488279 GATMP50440 423 aa25.46■■□□□ 1.67
PTPN4-211ENST00000488279 COL19A1Q14993 1142 aa25.46■■□□□ 1.67
PTPN4-211ENST00000488279 ANKRD1Q15327 319 aa25.46■■□□□ 1.67
PTPN4-211ENST00000488279 INF2Q27J81 1249 aa25.46■■□□□ 1.67
PTPN4-211ENST00000488279 LINC01465Q8N7H1 131 aa25.46■■□□□ 1.67
PTPN4-211ENST00000488279 ADAMTS10Q9H324 1103 aa25.46■■□□□ 1.67
PTPN4-211ENST00000488279 CLDND1Q9NY35 253 aa25.46■■□□□ 1.67
PTPN4-211ENST00000488279 DDX25Q9UHL0 483 aaKnown RBP25.46■■□□□ 1.67
PTPN4-211ENST00000488279 BRWD1Q9NSI6 2320 aa25.46■■□□□ 1.67
PTPN4-211ENST00000488279 RALGAPA2Q2PPJ7 1873 aa25.45■■□□□ 1.67
PTPN4-211ENST00000488279 CCDC194A0A1B0GVG4 234 aa25.45■■□□□ 1.66
PTPN4-211ENST00000488279 EIF4BP23588 611 aaKnown RBP25.45■■□□□ 1.66
PTPN4-211ENST00000488279 FAM189BP81408 668 aa25.45■■□□□ 1.66
PTPN4-211ENST00000488279 TBC1D8BQ0IIM8 1120 aa25.45■■□□□ 1.66
PTPN4-211ENST00000488279 KLHL23Q8NBE8 558 aa25.45■■□□□ 1.66
PTPN4-211ENST00000488279 ETNPPLQ8TBG4 499 aa25.45■■□□□ 1.66
PTPN4-211ENST00000488279 PHF20Q9BVI0 1012 aa25.45■■□□□ 1.66
PTPN4-211ENST00000488279 C1QTNF1Q9BXJ1 281 aa25.45■■□□□ 1.66
PTPN4-211ENST00000488279 GRXCR2A6NFK2 248 aa25.44■■□□□ 1.66
PTPN4-211ENST00000488279 LETM2Q2VYF4 491 aa25.44■■□□□ 1.66
PTPN4-211ENST00000488279 XKR3Q5GH77 459 aa25.44■■□□□ 1.66
PTPN4-211ENST00000488279 FAM102BQ5T8I3 360 aa25.44■■□□□ 1.66
PTPN4-211ENST00000488279 B3GNT9Q6UX72 402 aa25.44■■□□□ 1.66
PTPN4-211ENST00000488279 SPPL3Q8TCT6 385 aa25.44■■□□□ 1.66
PTPN4-211ENST00000488279 NIFKQ9BYG3 293 aaKnown RBP25.44■■□□□ 1.66
PTPN4-211ENST00000488279 ATP6V0A4Q9HBG4 840 aa25.44■■□□□ 1.66
PTPN4-211ENST00000488279 NLRC5Q86WI3 1866 aa25.44■■□□□ 1.66
PTPN4-211ENST00000488279 MYH9P35579 1960 aaKnown RBP25.44■■□□□ 1.66
PTPN4-211ENST00000488279 STK36Q9NRP7 1315 aa25.43■■□□□ 1.66
PTPN4-211ENST00000488279 TBKBP1A7MCY6 615 aa25.43■■□□□ 1.66
PTPN4-211ENST00000488279 CSPG5O95196 566 aa25.43■■□□□ 1.66
PTPN4-211ENST00000488279 ITGB1P05556 798 aa25.43■■□□□ 1.66
PTPN4-211ENST00000488279 ZSCAN20P17040 1043 aaPredicted RBP25.43■■□□□ 1.66
PTPN4-211ENST00000488279 HYAL1Q12794 435 aa25.43■■□□□ 1.66
PTPN4-211ENST00000488279 CAMK1Q14012 370 aa25.43■■□□□ 1.66
PTPN4-211ENST00000488279 DSC3Q14574 896 aa25.43■■□□□ 1.66
PTPN4-211ENST00000488279 TARBP2Q15633 366 aaKnown RBP25.43■■□□□ 1.66
PTPN4-211ENST00000488279 SPOUT1Q5T280 376 aaKnown RBP25.43■■□□□ 1.66
PTPN4-211ENST00000488279 ELAC1Q9H777 363 aaKnown RBP25.43■■□□□ 1.66
PTPN4-211ENST00000488279 AAASQ9NRG9 546 aa25.43■■□□□ 1.66
PTPN4-211ENST00000488279 TMEM161AQ9NX61 479 aa25.43■■□□□ 1.66
PTPN4-211ENST00000488279 SEPT9Q9UHD8 586 aaPredicted RBP25.43■■□□□ 1.66
PTPN4-211ENST00000488279 FAM50BQ9Y247 325 aa25.43■■□□□ 1.66
PTPN4-211ENST00000488279 PCDHB12Q9Y5F1 795 aa25.43■■□□□ 1.66
PTPN4-211ENST00000488279 EVPLQ92817 2033 aa25.42■■□□□ 1.66
PTPN4-211ENST00000488279 IL9P15248 144 aa25.42■■□□□ 1.66
PTPN4-211ENST00000488279 GPC3P51654 580 aa25.42■■□□□ 1.66
PTPN4-211ENST00000488279 CDC42EP1Q00587 391 aa25.42■■□□□ 1.66
PTPN4-211ENST00000488279 CTC1Q2NKJ3 1217 aa25.42■■□□□ 1.66
PTPN4-211ENST00000488279 FAM178BQ8IXR5 827 aa25.42■■□□□ 1.66
PTPN4-211ENST00000488279 WASF1Q92558 559 aa25.42■■□□□ 1.66
PTPN4-211ENST00000488279 PPP2R3CQ969Q6 453 aa25.42■■□□□ 1.66
PTPN4-211ENST00000488279 FAM20AQ96MK3 541 aa25.42■■□□□ 1.66
PTPN4-211ENST00000488279 SCLT1Q96NL6 688 aa25.42■■□□□ 1.66
PTPN4-211ENST00000488279 IGFLR1Q9H665 355 aa25.42■■□□□ 1.66
PTPN4-211ENST00000488279 LOXHD1Q8IVV2 1947 aa25.41■■□□□ 1.66
PTPN4-211ENST00000488279 DNAJB1P25685 340 aa25.41■■□□□ 1.66
PTPN4-211ENST00000488279 AK2P54819 239 aa25.41■■□□□ 1.66
PTPN4-211ENST00000488279 MTERF2Q49AM1 385 aa25.41■■□□□ 1.66
PTPN4-211ENST00000488279 PPP4R3AQ6IN85 833 aa25.41■■□□□ 1.66
PTPN4-211ENST00000488279 NEK8Q86SG6 692 aa25.41■■□□□ 1.66
PTPN4-211ENST00000488279 POF1BQ8WVV4 589 aa25.41■■□□□ 1.66
PTPN4-211ENST00000488279 NLRP7Q8WX94 980 aa25.41■■□□□ 1.66
PTPN4-211ENST00000488279 ZNF668Q96K58 619 aaPredicted RBP25.41■■□□□ 1.66
PTPN4-211ENST00000488279 ORC3Q9UBD5 711 aaPredicted RBP25.41■■□□□ 1.66
PTPN4-211ENST00000488279 DDX11L8A8MPP1 907 aa25.4■■□□□ 1.66
PTPN4-211ENST00000488279 SLC37A4O43826 429 aa25.4■■□□□ 1.66
PTPN4-211ENST00000488279 EIF5BO60841 1220 aaKnown RBP25.4■■□□□ 1.66
PTPN4-211ENST00000488279 STBD1O95210 358 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms