RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 MAFO75444 373 aaPredicted RBP17.53■□□□□ 0.4
C9orf3-219ENST00000488186 CTSHP09668 335 aa17.53■□□□□ 0.4
C9orf3-219ENST00000488186 RSPH10BP0C881 870 aa17.53■□□□□ 0.4
C9orf3-219ENST00000488186 ECM1Q16610 540 aa17.53■□□□□ 0.4
C9orf3-219ENST00000488186 ZNF618Q5T7W0 954 aa17.53■□□□□ 0.4
C9orf3-219ENST00000488186 LRRC8DQ7L1W4 858 aa17.53■□□□□ 0.4
C9orf3-219ENST00000488186 LRRC71Q8N4P6 559 aa17.53■□□□□ 0.4
C9orf3-219ENST00000488186 KCTD17Q8N5Z5 321 aa17.53■□□□□ 0.4
C9orf3-219ENST00000488186 SYMPKQ92797 1274 aaKnown RBP17.53■□□□□ 0.4
C9orf3-219ENST00000488186 EPSTI1Q96J88 318 aa17.53■□□□□ 0.4
C9orf3-219ENST00000488186 BMP2KQ9NSY1 1161 aaPredicted RBP17.53■□□□□ 0.4
C9orf3-219ENST00000488186 UMODL1Q5DID0 1318 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 E9PMD0 336 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 DGAT1O75907 488 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 PARNO95453 639 aaKnown RBP17.52■□□□□ 0.4
C9orf3-219ENST00000488186 SSBP05455 408 aaKnown RBP eCLIP17.52■□□□□ 0.4
C9orf3-219ENST00000488186 IQCF3P0C7M6 154 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 ITGB8P26012 769 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 RARRES1P49788 294 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 CLCN3P51790 818 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 FPGSQ05932 587 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 TMEM62Q0P6H9 643 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 PPIGQ13427 754 aaKnown RBP eCLIP17.52■□□□□ 0.4
C9orf3-219ENST00000488186 TRIM71Q2Q1W2 868 aaKnown RBP17.52■□□□□ 0.4
C9orf3-219ENST00000488186 RPAINQ86UA6 219 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 RPUSD2Q8IZ73 545 aaKnown RBP17.52■□□□□ 0.4
C9orf3-219ENST00000488186 KIAA0319LQ8IZA0 1049 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 ZNF579Q8NAF0 562 aaKnown RBP17.52■□□□□ 0.4
C9orf3-219ENST00000488186 LEO1Q8WVC0 666 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-219ENST00000488186 WNT8BQ93098 351 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 SCLYQ96I15 445 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 SCLT1Q96NL6 688 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 MTRQ99707 1265 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 CCSER1Q9C0I3 900 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 BHMT2Q9H2M3 363 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 ATP6V0A4Q9HBG4 840 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 FAM13BQ9NYF5 915 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 PCDHA7Q9UN72 937 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 COLQQ9Y215 455 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-219ENST00000488186 GINS2Q9Y248 185 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 MYH15Q9Y2K3 1946 aa17.52■□□□□ 0.4
C9orf3-219ENST00000488186 GAS2O43903 313 aaKnown RBP17.51■□□□□ 0.39
C9orf3-219ENST00000488186 USO1O60763 962 aaKnown RBP17.51■□□□□ 0.39
C9orf3-219ENST00000488186 EYA4O95677 639 aa17.51■□□□□ 0.39
C9orf3-219ENST00000488186 RFC2P35250 354 aa17.51■□□□□ 0.39
C9orf3-219ENST00000488186 MRPS6P82932 125 aaKnown RBP17.51■□□□□ 0.39
C9orf3-219ENST00000488186 CDC42EP1Q00587 391 aa17.51■□□□□ 0.39
C9orf3-219ENST00000488186 GRB10Q13322 594 aa17.51■□□□□ 0.39
C9orf3-219ENST00000488186 EMC2Q15006 297 aa17.51■□□□□ 0.39
C9orf3-219ENST00000488186 KARSQ15046 597 aaKnown RBP17.51■□□□□ 0.39
C9orf3-219ENST00000488186 TPRNQ4KMQ1 711 aa17.51■□□□□ 0.39
C9orf3-219ENST00000488186 HYIQ5T013 277 aa17.51■□□□□ 0.39
C9orf3-219ENST00000488186 RRAGBQ5VZM2 374 aa17.51■□□□□ 0.39
C9orf3-219ENST00000488186 PADI6Q6TGC4 694 aa17.51■□□□□ 0.39
C9orf3-219ENST00000488186 CHRDL2Q6WN34 429 aa17.51■□□□□ 0.39
C9orf3-219ENST00000488186 TCP11Q8WWU5 503 aa17.51■□□□□ 0.39
C9orf3-219ENST00000488186 CHAMP1Q96JM3 812 aa17.51■□□□□ 0.39
C9orf3-219ENST00000488186 PNMA5Q96PV4 448 aa17.51■□□□□ 0.39
C9orf3-219ENST00000488186 PANK2Q9BZ23 570 aa17.51■□□□□ 0.39
C9orf3-219ENST00000488186 SUCLA2Q9P2R7 463 aaPredicted RBP17.51■□□□□ 0.39
C9orf3-219ENST00000488186 GOLGA6L4A6NEF3 574 aa17.5■□□□□ 0.39
C9orf3-219ENST00000488186 VTNP04004 478 aa17.5■□□□□ 0.39
C9orf3-219ENST00000488186 CSF2RAP15509 400 aa17.5■□□□□ 0.39
C9orf3-219ENST00000488186 CSPP1Q1MSJ5 1256 aa17.5■□□□□ 0.39
C9orf3-219ENST00000488186 CCDC73Q6ZRK6 1079 aa17.5■□□□□ 0.39
C9orf3-219ENST00000488186 USP49Q70CQ1 688 aa17.5■□□□□ 0.39
C9orf3-219ENST00000488186 MAEAQ7L5Y9 396 aa17.5■□□□□ 0.39
C9orf3-219ENST00000488186 DEFB128Q7Z7B8 93 aa17.5■□□□□ 0.39
C9orf3-219ENST00000488186 ZNF710Q8N1W2 664 aa17.5■□□□□ 0.39
C9orf3-219ENST00000488186 MCPH1Q8NEM0 835 aa17.5■□□□□ 0.39
C9orf3-219ENST00000488186 PPP1R16BQ96T49 567 aa17.5■□□□□ 0.39
C9orf3-219ENST00000488186 WNT8AQ9H1J5 351 aa17.5■□□□□ 0.39
C9orf3-219ENST00000488186 DHX33Q9H6R0 707 aaKnown RBP17.5■□□□□ 0.39
C9orf3-219ENST00000488186 TRPV2Q9Y5S1 764 aa17.5■□□□□ 0.39
C9orf3-219ENST00000488186 CDY2AQ9Y6F7 541 aa17.5■□□□□ 0.39
C9orf3-219ENST00000488186 IGKV6-21A0A0C4DH24 114 aa17.49■□□□□ 0.39
C9orf3-219ENST00000488186 PFKMP08237 780 aa17.49■□□□□ 0.39
C9orf3-219ENST00000488186 PLA2G4BP0C869 781 aa17.49■□□□□ 0.39
C9orf3-219ENST00000488186 PLCG1P19174 1290 aa17.49■□□□□ 0.39
C9orf3-219ENST00000488186 DHX8Q14562 1220 aaKnown RBP17.49■□□□□ 0.39
C9orf3-219ENST00000488186 TMEM119Q4V9L6 283 aa17.49■□□□□ 0.39
C9orf3-219ENST00000488186 FAM102BQ5T8I3 360 aa17.49■□□□□ 0.39
C9orf3-219ENST00000488186 RHPN2Q8IUC4 686 aa17.49■□□□□ 0.39
C9orf3-219ENST00000488186 TDHQ8IZJ6 230 aa17.49■□□□□ 0.39
C9orf3-219ENST00000488186 NLRP7Q8WX94 980 aa17.49■□□□□ 0.39
C9orf3-219ENST00000488186 PSPC1Q8WXF1 523 aaKnown RBP17.49■□□□□ 0.39
C9orf3-219ENST00000488186 TMEM143Q96AN5 459 aa17.49■□□□□ 0.39
C9orf3-219ENST00000488186 CEP89Q96ST8 783 aa17.49■□□□□ 0.39
C9orf3-219ENST00000488186 CELF4Q9BZC1 486 aaKnown RBP17.49■□□□□ 0.39
C9orf3-219ENST00000488186 UBE2OQ9C0C9 1292 aaKnown RBP17.49■□□□□ 0.39
C9orf3-219ENST00000488186 GDPD2Q9HCC8 539 aa17.49■□□□□ 0.39
C9orf3-219ENST00000488186 PCDH10Q9P2E7 1040 aa17.49■□□□□ 0.39
C9orf3-219ENST00000488186 TANC1Q9C0D5 1861 aa17.48■□□□□ 0.39
C9orf3-219ENST00000488186 ASAP2O43150 1006 aa17.48■□□□□ 0.39
C9orf3-219ENST00000488186 CHRNA1P02708 482 aa17.48■□□□□ 0.39
C9orf3-219ENST00000488186 STAT6P42226 847 aa17.48■□□□□ 0.39
C9orf3-219ENST00000488186 NLRP11P59045 1033 aaKnown RBP17.48■□□□□ 0.39
C9orf3-219ENST00000488186 KIZQ2M2Z5 673 aa17.48■□□□□ 0.39
C9orf3-219ENST00000488186 FAM26DQ5JW98 314 aa17.48■□□□□ 0.39
C9orf3-219ENST00000488186 AXDND1Q5T1B0 1012 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms