RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 FNDC1Q4ZHG4 1894 aaPredicted RBP10.45□□□□□ -0.74
LCN2-205ENST00000487719 DENND3A2RUS2 1198 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 POTEMA6NI47 508 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 ZBTB42B2RXF5 422 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 VTNP04004 478 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 MUTP22033 750 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 CLCN3P51790 818 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 SPIRE1Q08AE8 756 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 MGAT3Q09327 533 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 PTGDRQ13258 359 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 CTTNQ14247 550 aaKnown RBP10.45□□□□□ -0.74
LCN2-205ENST00000487719 LPIN1Q14693 890 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 MBTPS1Q14703 1052 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 KRT79Q5XKE5 535 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 PPP2R2DQ66LE6 453 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 TRAF7Q6Q0C0 670 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 HERC6Q8IVU3 1022 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 KIAA0319LQ8IZA0 1049 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 LRRC71Q8N4P6 559 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 PSPC1Q8WXF1 523 aaKnown RBP10.45□□□□□ -0.74
LCN2-205ENST00000487719 CDK5RAP3Q96JB5 506 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 NACC1Q96RE7 527 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 MTRQ99707 1265 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 PBX4Q9BYU1 374 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 GCOM2Q9BZD3 368 aaPredicted RBP10.45□□□□□ -0.74
LCN2-205ENST00000487719 LRFN2Q9ULH4 789 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 SZT2Q5T011 3432 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 TCHHQ07283 1943 aa10.45□□□□□ -0.74
LCN2-205ENST00000487719 MAFO75444 373 aaPredicted RBP10.44□□□□□ -0.74
LCN2-205ENST00000487719 DGAT1O75907 488 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 LYPLA2O95372 231 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 STAG3L1P0CL83 205 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 XRCC6P12956 609 aaKnown RBP eCLIP10.44□□□□□ -0.74
LCN2-205ENST00000487719 ZSCAN20P17040 1043 aaPredicted RBP10.44□□□□□ -0.74
LCN2-205ENST00000487719 SFPQP23246 707 aaKnown RBP eCLIP10.44□□□□□ -0.74
LCN2-205ENST00000487719 CCT6AP40227 531 aaKnown RBP10.44□□□□□ -0.74
LCN2-205ENST00000487719 FXR2P51116 673 aaKnown RBP eCLIP10.44□□□□□ -0.74
LCN2-205ENST00000487719 NLRP11P59045 1033 aaKnown RBP10.44□□□□□ -0.74
LCN2-205ENST00000487719 TFDP1Q14186 410 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 BECN1Q14457 450 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 PDIA5Q14554 519 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 TARBP2Q15633 366 aaKnown RBP10.44□□□□□ -0.74
LCN2-205ENST00000487719 KIZQ2M2Z5 673 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 ARL6IP4Q66PJ3 421 aaKnown RBP10.44□□□□□ -0.74
LCN2-205ENST00000487719 PLA2G4FQ68DD2 849 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 ANO5Q75V66 913 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 ZNF410Q86VK4 478 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 RASSF8Q8NHQ8 419 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 ZBTB10Q96DT7 871 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 PPP1R16BQ96T49 567 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 YME1L1Q96TA2 773 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 GAS2L1Q99501 681 aaPredicted RBP10.44□□□□□ -0.74
LCN2-205ENST00000487719 OSMRQ99650 979 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 POLR3CQ9BUI4 534 aaPredicted RBP10.44□□□□□ -0.74
LCN2-205ENST00000487719 TMEM60Q9H2L4 133 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 ZNF576Q9H609 170 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 ATP6V0A4Q9HBG4 840 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 ANKEF1Q9NU02 776 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 RGL1Q9NZL6 768 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 SUCLA2Q9P2R7 463 aaPredicted RBP10.44□□□□□ -0.74
LCN2-205ENST00000487719 INSL6Q9Y581 213 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 PCDHB6Q9Y5E3 794 aa10.44□□□□□ -0.74
LCN2-205ENST00000487719 TDRD15B5MCY1 1934 aaKnown RBP10.44□□□□□ -0.74
LCN2-205ENST00000487719 KIAA1671Q9BY89 1806 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 ARHGEF35A5YM69 484 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 GRXCR1A8MXD5 290 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 ASAP2O43150 1006 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 STX6O43752 255 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 SLITRK3O94933 977 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 UPP2O95045 317 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 GJB5O95377 273 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 SYT1P21579 422 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 EIF4BP23588 611 aaKnown RBP10.43□□□□□ -0.74
LCN2-205ENST00000487719 RPA1P27694 616 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 CD52P31358 61 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 RABGGTBP53611 331 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 NPEPPSP55786 919 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 NCBP1Q09161 790 aaKnown RBP10.43□□□□□ -0.74
LCN2-205ENST00000487719 MXD4Q14582 209 aaPredicted RBP10.43□□□□□ -0.74
LCN2-205ENST00000487719 EMC2Q15006 297 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 FAM117BQ6P1L5 589 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 FERMT3Q86UX7 667 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 RHPN2Q8IUC4 686 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 MCPH1Q8NEM0 835 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 SNX29Q8TEQ0 813 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 FAM161BQ96MY7 647 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 RAD9AQ99638 391 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 HSD17B14Q9BPX1 270 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 NT5C3AQ9H0P0 336 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 NKX2-4Q9H2Z4 354 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 ZSCAN16Q9H4T2 348 aaPredicted RBP10.43□□□□□ -0.74
LCN2-205ENST00000487719 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.43□□□□□ -0.74
LCN2-205ENST00000487719 C1orf112Q9NSG2 853 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 FOXD4L1Q9NU39 408 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 DACT1Q9NYF0 836 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 PADI3Q9ULW8 664 aa10.43□□□□□ -0.74
LCN2-205ENST00000487719 TMEM150BA6NC51 233 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 WNT7AO00755 349 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 CA3P07451 260 aa10.42□□□□□ -0.74
LCN2-205ENST00000487719 PBX2P40425 430 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms