RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 GBP3Q9H0R5 595 aa5.86□□□□□ -1.47
CNN3-206ENST00000487539 GP6Q9HCN6 339 aa5.86□□□□□ -1.47
CNN3-206ENST00000487539 ZMYND8Q9ULU4 1186 aaPredicted RBP5.86□□□□□ -1.47
CNN3-206ENST00000487539 ZNF281Q9Y2X9 895 aa5.86□□□□□ -1.47
CNN3-206ENST00000487539 NR2E3Q9Y5X4 410 aa5.86□□□□□ -1.47
CNN3-206ENST00000487539 FHOD1Q9Y613 1164 aa5.86□□□□□ -1.47
CNN3-206ENST00000487539 SCN9AQ15858 1988 aa5.86□□□□□ -1.47
CNN3-206ENST00000487539 LAMA2P24043 3122 aaKnown RBP5.85□□□□□ -1.47
CNN3-206ENST00000487539 KIF7Q2M1P5 1343 aa5.85□□□□□ -1.47
CNN3-206ENST00000487539 IRS2Q9Y4H2 1338 aa5.85□□□□□ -1.47
CNN3-206ENST00000487539 SHOXO15266 292 aa5.85□□□□□ -1.47
CNN3-206ENST00000487539 PRICKLE3O43900 615 aaPredicted RBP5.85□□□□□ -1.47
CNN3-206ENST00000487539 CD247P20963 164 aa5.85□□□□□ -1.47
CNN3-206ENST00000487539 NR0B2Q15466 257 aa5.85□□□□□ -1.47
CNN3-206ENST00000487539 MTHFSDQ2M296 383 aaKnown RBP5.85□□□□□ -1.47
CNN3-206ENST00000487539 SUSD4Q5VX71 490 aa5.85□□□□□ -1.47
CNN3-206ENST00000487539 DPP8Q6V1X1 898 aaPredicted RBP5.85□□□□□ -1.47
CNN3-206ENST00000487539 SLC43A3Q8NBI5 491 aa5.85□□□□□ -1.47
CNN3-206ENST00000487539 LINC01599Q8WXQ3 324 aa5.85□□□□□ -1.47
CNN3-206ENST00000487539 VPS33BQ9H267 617 aa5.85□□□□□ -1.47
CNN3-206ENST00000487539 ZMYM5Q9UJ78 669 aa5.85□□□□□ -1.47
CNN3-206ENST00000487539 YBX2Q9Y2T7 364 aaKnown RBP5.85□□□□□ -1.47
CNN3-206ENST00000487539 SF3B6Q9Y3B4 125 aaKnown RBP5.85□□□□□ -1.47
CNN3-206ENST00000487539 DUOX1Q9NRD9 1551 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 RIC1Q4ADV7 1423 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 ABCC4O15439 1325 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 UBN2Q6ZU65 1347 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 MEIS1O00470 390 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 MATN3O15232 486 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 NAT2P11245 290 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 GPTP24298 496 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 CTGFP29279 349 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 KIR2DL1P43626 348 aaPredicted RBP5.84□□□□□ -1.47
CNN3-206ENST00000487539 KIR2DL2P43627 348 aaPredicted RBP5.84□□□□□ -1.47
CNN3-206ENST00000487539 ZNF445P59923 1031 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 SNX17Q15036 470 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 LRIT3Q3SXY7 679 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 HEATR6Q6AI08 1181 aaKnown RBP5.84□□□□□ -1.47
CNN3-206ENST00000487539 ZNF790Q6PG37 636 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 FAM169BQ8N8A8 192 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 IL17REQ8NFR9 667 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 HAUS7Q99871 368 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 CWC22Q9HCG8 908 aaKnown RBP5.84□□□□□ -1.47
CNN3-206ENST00000487539 FAM86C1Q9NVL1 165 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 WHRNQ9P202 907 aa5.84□□□□□ -1.47
CNN3-206ENST00000487539 TMEM82A0PJX8 343 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 PPM1BO75688 479 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 ZNF205O95201 554 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 FGRP09769 529 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 VAV1P15498 845 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 CTSKP43235 329 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 NOP2P46087 812 aaKnown RBP5.83□□□□□ -1.48
CNN3-206ENST00000487539 ZNF280AP59817 542 aaPredicted RBP5.83□□□□□ -1.48
CNN3-206ENST00000487539 NCAPHQ15003 741 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 VHLLQ6RSH7 139 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 TTC5Q8N0Z6 440 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 FIBCD1Q8N539 461 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 NGEFQ8N5V2 710 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 SUPT20HQ8NEM7 779 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 MAFAQ8NHW3 353 aaPredicted RBP5.83□□□□□ -1.48
CNN3-206ENST00000487539 WNK4Q96J92 1243 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 MAP6Q96JE9 813 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 FCRL2Q96LA5 508 aaPredicted RBP5.83□□□□□ -1.48
CNN3-206ENST00000487539 CDX2Q99626 313 aaPredicted RBP5.83□□□□□ -1.48
CNN3-206ENST00000487539 HTATIP2Q9BUP3 242 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 EPB41L4AQ9HCS5 686 aaPredicted RBP5.83□□□□□ -1.48
CNN3-206ENST00000487539 LUC7LQ9NQ29 371 aaKnown RBP5.83□□□□□ -1.48
CNN3-206ENST00000487539 POLLQ9UGP5 575 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 PCDHB10Q9UN67 800 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 MINPP1Q9UNW1 487 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 DIS3Q9Y2L1 958 aaKnown RBP5.83□□□□□ -1.48
CNN3-206ENST00000487539 ZNF451Q9Y4E5 1061 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 PIEZO1Q92508 2521 aa5.83□□□□□ -1.48
CNN3-206ENST00000487539 COL4A1P02462 1669 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 MANSC4A6NHS7 340 aaPredicted RBP5.82□□□□□ -1.48
CNN3-206ENST00000487539 K7ESM1 405 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 CBFA2T2O43439 604 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 ECE2O60344 883 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 VIL1P09327 827 aaKnown RBP5.82□□□□□ -1.48
CNN3-206ENST00000487539 HMOX1P09601 288 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 CCL5P13501 91 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 DNAJA1P31689 397 aaKnown RBP5.82□□□□□ -1.48
CNN3-206ENST00000487539 IL13P35225 146 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 MAGEA10P43363 369 aaPredicted RBP5.82□□□□□ -1.48
CNN3-206ENST00000487539 ZNF143P52747 638 aaPredicted RBP5.82□□□□□ -1.48
CNN3-206ENST00000487539 POU4F1Q01851 419 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 KIAA1211LQ6NV74 962 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 CRTC3Q6UUV7 619 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 TTLL7Q6ZT98 887 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 NPM2Q86SE8 214 aaKnown RBP5.82□□□□□ -1.48
CNN3-206ENST00000487539 USP38Q8NB14 1042 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 DIS3LQ8TF46 1054 aaKnown RBP5.82□□□□□ -1.48
CNN3-206ENST00000487539 BRF1Q92994 677 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 GMLQ99445 158 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 G6PC3Q9BUM1 346 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 MXD3Q9BW11 206 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 CDADC1Q9BWV3 514 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 TEX13AQ9BXU3 409 aaPredicted RBP5.82□□□□□ -1.48
CNN3-206ENST00000487539 KLHL25Q9H0H3 589 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 ACTR10Q9NZ32 417 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms