RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 RTN1Q16799 776 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 PLPP4Q5VZY2 271 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 SWSAP1Q6NVH7 229 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 MIS18BP1Q6P0N0 1132 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 PLA2G4DQ86XP0 818 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 ZNF713Q8N859 430 aaPredicted RBP22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 PRRX2Q99811 253 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 ELAC1Q9H777 363 aaKnown RBP22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 BARHL2Q9NY43 387 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 V9GY48 417 aaPredicted RBP22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 PLCB3Q01970 1234 aa22.1■■□□□ 1.13
SMPDL3A-202ENST00000487215 DSC3Q14574 896 aa22.1■■□□□ 1.13
SMPDL3A-202ENST00000487215 TMEM184AQ6ZMB5 413 aa22.1■■□□□ 1.13
SMPDL3A-202ENST00000487215 MRPS27Q92552 414 aaKnown RBP22.1■■□□□ 1.13
SMPDL3A-202ENST00000487215 ASIC4Q96FT7 647 aa22.1■■□□□ 1.13
SMPDL3A-202ENST00000487215 S1PR5Q9H228 398 aa22.1■■□□□ 1.13
SMPDL3A-202ENST00000487215 ANO2Q9NQ90 1003 aa22.1■■□□□ 1.13
SMPDL3A-202ENST00000487215 BRPF3Q9ULD4 1205 aa22.1■■□□□ 1.13
SMPDL3A-202ENST00000487215 LZTS1Q9Y250 596 aa22.1■■□□□ 1.13
SMPDL3A-202ENST00000487215 KMT2EQ8IZD2 1858 aa22.09■■□□□ 1.13
SMPDL3A-202ENST00000487215 IGLV3-22A0A075B6J6 115 aa22.09■■□□□ 1.13
SMPDL3A-202ENST00000487215 ZBTB43O43298 467 aa22.09■■□□□ 1.13
SMPDL3A-202ENST00000487215 GPR32O75388 356 aa22.09■■□□□ 1.13
SMPDL3A-202ENST00000487215 VTNP04004 478 aa22.09■■□□□ 1.13
SMPDL3A-202ENST00000487215 SRGAP2BP0DMP2 458 aa22.09■■□□□ 1.13
SMPDL3A-202ENST00000487215 TECP42680 631 aa22.09■■□□□ 1.13
SMPDL3A-202ENST00000487215 ANKRD54Q6NXT1 300 aa22.09■■□□□ 1.13
SMPDL3A-202ENST00000487215 CKAP2LQ8IYA6 745 aa22.09■■□□□ 1.13
SMPDL3A-202ENST00000487215 TCEANC2Q96MN5 208 aa22.09■■□□□ 1.13
SMPDL3A-202ENST00000487215 TCF25Q9BQ70 676 aa22.09■■□□□ 1.13
SMPDL3A-202ENST00000487215 TMEM117Q9H0C3 514 aa22.09■■□□□ 1.13
SMPDL3A-202ENST00000487215 GLT8D2Q9H1C3 349 aa22.09■■□□□ 1.13
SMPDL3A-202ENST00000487215 IPO5O00410 1097 aaKnown RBP22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 VCPP55072 806 aaKnown RBP22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 PTPN21Q16825 1174 aa22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 JAKMIP3Q5VZ66 844 aa22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 SYCE2Q6PIF2 218 aa22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 LRRC55Q6ZSA7 311 aa22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 METTL13Q8N6R0 699 aa22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 RASGRP4Q8TDF6 673 aa22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 CRYGNQ8WXF5 182 aa22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 BBXQ8WY36 941 aaPredicted RBP22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 CASD1Q96PB1 797 aa22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 APOL5Q9BWW9 433 aa22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 ENTPD7Q9NQZ7 604 aa22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 RNF19AQ9NV58 838 aa22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 MAFBQ9Y5Q3 323 aaPredicted RBP22.08■■□□□ 1.13
SMPDL3A-202ENST00000487215 HIDE1A8MVS5 230 aa22.07■■□□□ 1.12
SMPDL3A-202ENST00000487215 CYP3A4P08684 503 aa22.07■■□□□ 1.12
SMPDL3A-202ENST00000487215 EXOSC10Q01780 885 aaKnown RBP22.07■■□□□ 1.12
SMPDL3A-202ENST00000487215 LLGL2Q6P1M3 1020 aa22.07■■□□□ 1.12
SMPDL3A-202ENST00000487215 TRMT1LQ7Z2T5 733 aaKnown RBP22.07■■□□□ 1.12
SMPDL3A-202ENST00000487215 ZNF577Q9BSK1 485 aa22.07■■□□□ 1.12
SMPDL3A-202ENST00000487215 FAM217BQ9NTX9 383 aaPredicted RBP22.07■■□□□ 1.12
SMPDL3A-202ENST00000487215 PUF60Q9UHX1 559 aaKnown RBP22.07■■□□□ 1.12
SMPDL3A-202ENST00000487215 GOLGA8AA7E2F4 631 aa22.06■■□□□ 1.12
SMPDL3A-202ENST00000487215 GOLGA8BA8MQT2 603 aa22.06■■□□□ 1.12
SMPDL3A-202ENST00000487215 PBX3P40426 434 aa22.06■■□□□ 1.12
SMPDL3A-202ENST00000487215 CLCN3P51790 818 aa22.06■■□□□ 1.12
SMPDL3A-202ENST00000487215 ZNF746Q6NUN9 644 aaPredicted RBP22.06■■□□□ 1.12
SMPDL3A-202ENST00000487215 KCNT2Q6UVM3 1135 aa22.06■■□□□ 1.12
SMPDL3A-202ENST00000487215 NGRNQ9NPE2 291 aaKnown RBP22.06■■□□□ 1.12
SMPDL3A-202ENST00000487215 ADAMTS3O15072 1205 aa22.05■■□□□ 1.12
SMPDL3A-202ENST00000487215 HOXA2O43364 376 aa22.05■■□□□ 1.12
SMPDL3A-202ENST00000487215 SP100P23497 879 aaPredicted RBP22.05■■□□□ 1.12
SMPDL3A-202ENST00000487215 CDC27P30260 824 aa22.05■■□□□ 1.12
SMPDL3A-202ENST00000487215 RNF20Q5VTR2 975 aa22.05■■□□□ 1.12
SMPDL3A-202ENST00000487215 SMAP1Q8IYB5 467 aaPredicted RBP22.05■■□□□ 1.12
SMPDL3A-202ENST00000487215 LRRC43Q8N309 656 aa22.05■■□□□ 1.12
SMPDL3A-202ENST00000487215 ZNF558Q96NG5 402 aa22.05■■□□□ 1.12
SMPDL3A-202ENST00000487215 TBC1D22BQ9NU19 505 aa22.05■■□□□ 1.12
SMPDL3A-202ENST00000487215 CEP131Q9UPN4 1083 aa22.05■■□□□ 1.12
SMPDL3A-202ENST00000487215 EVPLQ92817 2033 aa22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 KLF18A0A0U1RQI7 1052 aa22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 HOXB8P17481 243 aaPredicted RBP22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 AVPR2P30518 371 aa22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 PPM1AP35813 382 aa22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 NLRP11P59045 1033 aaKnown RBP22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 IRX6P78412 446 aaPredicted RBP22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 SETQ01105 290 aaPredicted RBP22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 DHX32Q7L7V1 743 aaKnown RBP22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 LINC01465Q8N7H1 131 aa22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 ADAMTS10Q9H324 1103 aa22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 FAM86C1Q9NVL1 165 aa22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 GABBR1Q9UBS5 961 aa22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 CDH22Q9UJ99 828 aa22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 AKT3Q9Y243 479 aa22.04■■□□□ 1.12
SMPDL3A-202ENST00000487215 MAGEB2O15479 319 aa22.03■■□□□ 1.12
SMPDL3A-202ENST00000487215 PSAPP07602 524 aa22.03■■□□□ 1.12
SMPDL3A-202ENST00000487215 PFKFB3Q16875 520 aaPredicted RBP22.03■■□□□ 1.12
SMPDL3A-202ENST00000487215 TMC7Q7Z402 723 aa22.03■■□□□ 1.12
SMPDL3A-202ENST00000487215 ZBTB33Q86T24 672 aa22.03■■□□□ 1.12
SMPDL3A-202ENST00000487215 ECHDC2Q86YB7 292 aa22.03■■□□□ 1.12
SMPDL3A-202ENST00000487215 ABI1Q8IZP0 508 aa22.03■■□□□ 1.12
SMPDL3A-202ENST00000487215 MAP7D2Q96T17 732 aa22.03■■□□□ 1.12
SMPDL3A-202ENST00000487215 PCDHA10Q9Y5I2 948 aa22.03■■□□□ 1.12
SMPDL3A-202ENST00000487215 ESYT2A0FGR8 921 aa22.02■■□□□ 1.12
SMPDL3A-202ENST00000487215 ST18O60284 1047 aa22.02■■□□□ 1.12
SMPDL3A-202ENST00000487215 PDGFBP01127 241 aaPredicted RBP22.02■■□□□ 1.12
SMPDL3A-202ENST00000487215 ZSCAN20P17040 1043 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms