RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 ZNF862O60290 1169 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 CELF2O95319 508 aaKnown RBP12.8□□□□□ -0.36
PRKCB-207ENST00000486868 EPB41P11171 864 aaKnown RBP12.8□□□□□ -0.36
PRKCB-207ENST00000486868 HNRNPH3P31942 346 aaKnown RBP12.8□□□□□ -0.36
PRKCB-207ENST00000486868 KRT9P35527 623 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 FXR1P51114 621 aaKnown RBP eCLIP12.8□□□□□ -0.361e-8■■□□□ 13.7
PRKCB-207ENST00000486868 NCKAP1LP55160 1127 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 ADKP55263 362 aaKnown RBP12.8□□□□□ -0.36
PRKCB-207ENST00000486868 ENPEPQ07075 957 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 MEA1Q16626 185 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 TSR1Q2NL82 804 aaKnown RBP12.8□□□□□ -0.36
PRKCB-207ENST00000486868 SWSAP1Q6NVH7 229 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 CYP26C1Q6V0L0 522 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 NYAP1Q6ZVC0 841 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 ANO5Q75V66 913 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 CREBRFQ8IUR6 639 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 EXOC8Q8IYI6 725 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 ZNF397Q8NF99 534 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-207ENST00000486868 SEPT1Q8WYJ6 367 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 PRIMPOLQ96LW4 560 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 ACCSQ96QU6 501 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 GBP3Q9H0R5 595 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 NUCKS1Q9H1E3 243 aaKnown RBP12.8□□□□□ -0.36
PRKCB-207ENST00000486868 ABHD10Q9NUJ1 306 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 ARMCX3Q9UH62 379 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-207ENST00000486868 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.8□□□□□ -0.36
PRKCB-207ENST00000486868 SYNGAP1Q96PV0 1343 aa12.8□□□□□ -0.36
PRKCB-207ENST00000486868 TTC26A0AVF1 554 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 GTPBP10A4D1E9 387 aaKnown RBP12.79□□□□□ -0.36
PRKCB-207ENST00000486868 BACH1O14867 736 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 FARP2O94887 1054 aaPredicted RBP12.79□□□□□ -0.36
PRKCB-207ENST00000486868 ITGBL1O95965 494 aaPredicted RBP12.79□□□□□ -0.36
PRKCB-207ENST00000486868 NR3C1P04150 777 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 UBA1P22314 1058 aaKnown RBP12.79□□□□□ -0.36
PRKCB-207ENST00000486868 NMT1P30419 496 aaKnown RBP12.79□□□□□ -0.36
PRKCB-207ENST00000486868 PSMC2P35998 433 aaKnown RBP12.79□□□□□ -0.36
PRKCB-207ENST00000486868 SMTNP53814 917 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 SP2Q02086 613 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 SYCP1Q15431 976 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 FAM110CQ1W6H9 321 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 ZNF792Q3KQV3 632 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 FAM160B1Q5W0V3 765 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 CEP135Q66GS9 1140 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 SEPT14Q6ZU15 432 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 CCDC60Q8IWA6 550 aaPredicted RBP12.79□□□□□ -0.36
PRKCB-207ENST00000486868 MSL3Q8N5Y2 521 aaKnown RBP12.79□□□□□ -0.36
PRKCB-207ENST00000486868 SMCR8Q8TEV9 937 aaPredicted RBP12.79□□□□□ -0.36
PRKCB-207ENST00000486868 FAM167AQ96KS9 214 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 CEP170P1Q96L14 293 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 ZNF408Q9H9D4 720 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 ZNF302Q9NR11 478 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 CYP26B1Q9NR63 512 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 NRBP2Q9NSY0 501 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 DDX41Q9UJV9 622 aaKnown RBP12.79□□□□□ -0.36
PRKCB-207ENST00000486868 EXOC7Q9UPT5 735 aa12.79□□□□□ -0.36
PRKCB-207ENST00000486868 RBM47A0AV96 593 aaKnown RBP12.78□□□□□ -0.36
PRKCB-207ENST00000486868 DCAF8L1A6NGE4 600 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 SFI1A8K8P3 1242 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 PES1O00541 588 aaKnown RBP12.78□□□□□ -0.36
PRKCB-207ENST00000486868 USO1O60763 962 aaKnown RBP12.78□□□□□ -0.36
PRKCB-207ENST00000486868 LGR5O75473 907 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 TRIM21P19474 475 aaKnown RBP12.78□□□□□ -0.36
PRKCB-207ENST00000486868 RFC5P40937 340 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 SLC26A2P50443 739 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 PRKCEQ02156 737 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 HSP90AA2PQ14568 343 aaPredicted RBP12.78□□□□□ -0.36
PRKCB-207ENST00000486868 PPP2R5AQ15172 486 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 PTPN14Q15678 1187 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 CCDC62Q6P9F0 684 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 MAMDC4Q6UXC1 1216 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 CYFIP1Q7L576 1253 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 SYN2Q92777 582 aaPredicted RBP12.78□□□□□ -0.36
PRKCB-207ENST00000486868 BORCS6Q96GS4 357 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 ATP6V0A4Q9HBG4 840 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 VTA1Q9NP79 307 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 AGPAT3Q9NRZ7 376 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.78□□□□□ -0.36
PRKCB-207ENST00000486868 FBXL5Q9UKA1 691 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 PAXBP1Q9Y5B6 917 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 ZMYM2Q9UBW7 1377 aa12.78□□□□□ -0.36
PRKCB-207ENST00000486868 GSTTP1A0A1W2PQM5 241 aa12.77□□□□□ -0.37
PRKCB-207ENST00000486868 MANSC4A6NHS7 340 aaPredicted RBP12.77□□□□□ -0.37
PRKCB-207ENST00000486868 RASSF10A6NK89 507 aa12.77□□□□□ -0.37
PRKCB-207ENST00000486868 K7ENM7 598 aa12.77□□□□□ -0.37
PRKCB-207ENST00000486868 GAS2O43903 313 aaKnown RBP12.77□□□□□ -0.37
PRKCB-207ENST00000486868 OATP04181 439 aa12.77□□□□□ -0.37
PRKCB-207ENST00000486868 CYP2C8P10632 490 aa12.77□□□□□ -0.37
PRKCB-207ENST00000486868 MAPK4P31152 587 aa12.77□□□□□ -0.37
PRKCB-207ENST00000486868 INHBEP58166 350 aa12.77□□□□□ -0.37
PRKCB-207ENST00000486868 FSTL1Q12841 308 aa12.77□□□□□ -0.37
PRKCB-207ENST00000486868 DMP1Q13316 513 aaPredicted RBP12.77□□□□□ -0.37
PRKCB-207ENST00000486868 TTLL4Q14679 1199 aa12.77□□□□□ -0.37
PRKCB-207ENST00000486868 TARBP2Q15633 366 aaKnown RBP12.77□□□□□ -0.37
PRKCB-207ENST00000486868 DNTTIP2Q5QJE6 756 aaKnown RBP12.77□□□□□ -0.37
PRKCB-207ENST00000486868 CELF3Q5SZQ8 465 aaKnown RBP12.77□□□□□ -0.37
PRKCB-207ENST00000486868 ZNF662Q6ZS27 426 aa12.77□□□□□ -0.37
PRKCB-207ENST00000486868 PLPPR4Q7Z2D5 763 aa12.77□□□□□ -0.37
PRKCB-207ENST00000486868 HAUS6Q7Z4H7 955 aa12.77□□□□□ -0.37
PRKCB-207ENST00000486868 CCDC170Q8IYT3 715 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms