RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 VAV3Q9UKW4 847 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 PADI3Q9ULW8 664 aa14.48□□□□□ -0.09
CHMP3-208ENST00000486404 ADGRA3Q8IWK6 1321 aa14.47□□□□□ -0.09
CHMP3-208ENST00000486404 DENND3A2RUS2 1198 aa14.47□□□□□ -0.09
CHMP3-208ENST00000486404 EPOPA6NHQ4 379 aa14.47□□□□□ -0.09
CHMP3-208ENST00000486404 RFXAPO00287 272 aa14.47□□□□□ -0.09
CHMP3-208ENST00000486404 HTRA4P83105 476 aaPredicted RBP14.47□□□□□ -0.09
CHMP3-208ENST00000486404 SKIV2LQ15477 1246 aaKnown RBP14.47□□□□□ -0.09
CHMP3-208ENST00000486404 EFCAB12Q6NXP0 572 aa14.47□□□□□ -0.09
CHMP3-208ENST00000486404 SPRED2Q7Z698 418 aa14.47□□□□□ -0.09
CHMP3-208ENST00000486404 FBXO22Q8NEZ5 403 aa14.47□□□□□ -0.09
CHMP3-208ENST00000486404 TNFRSF25Q93038 417 aa14.47□□□□□ -0.09
CHMP3-208ENST00000486404 KIF2CQ99661 725 aa14.47□□□□□ -0.09
CHMP3-208ENST00000486404 SUGCTQ9HAC7 445 aa14.47□□□□□ -0.09
CHMP3-208ENST00000486404 LRFN2Q9ULH4 789 aa14.47□□□□□ -0.09
CHMP3-208ENST00000486404 KIF3AQ9Y496 699 aa14.47□□□□□ -0.09
CHMP3-208ENST00000486404 PRRC2BQ5JSZ5 2229 aaKnown RBP14.47□□□□□ -0.09
CHMP3-208ENST00000486404 DDX11L8A8MPP1 907 aa14.46□□□□□ -0.09
CHMP3-208ENST00000486404 STAG3L1P0CL83 205 aa14.46□□□□□ -0.09
CHMP3-208ENST00000486404 QARSP47897 775 aaKnown RBP14.46□□□□□ -0.09
CHMP3-208ENST00000486404 CRYBB1P53674 252 aaPredicted RBP14.46□□□□□ -0.09
CHMP3-208ENST00000486404 ERVK-21P61565 698 aa14.46□□□□□ -0.09
CHMP3-208ENST00000486404 GRB10Q13322 594 aa14.46□□□□□ -0.09
CHMP3-208ENST00000486404 B3GNT9Q6UX72 402 aa14.46□□□□□ -0.09
CHMP3-208ENST00000486404 ZNF710Q8N1W2 664 aa14.46□□□□□ -0.09
CHMP3-208ENST00000486404 SP7Q8TDD2 431 aaPredicted RBP14.46□□□□□ -0.09
CHMP3-208ENST00000486404 LINC01599Q8WXQ3 324 aa14.46□□□□□ -0.09
CHMP3-208ENST00000486404 CCDC43Q96MW1 224 aaKnown RBP14.46□□□□□ -0.09
CHMP3-208ENST00000486404 SAMD11Q96NU1 681 aa14.46□□□□□ -0.09
CHMP3-208ENST00000486404 LXNQ9BS40 222 aa14.46□□□□□ -0.09
CHMP3-208ENST00000486404 FNDC1Q4ZHG4 1894 aaPredicted RBP14.46□□□□□ -0.1
CHMP3-208ENST00000486404 TMEM150BA6NC51 233 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 EML1O00423 815 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 ENPP3O14638 875 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 GPR182O15218 404 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 ATP2B1P20020 1258 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 DNM2P50570 870 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 PLA2G4FQ68DD2 849 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 NPAS4Q8IUM7 802 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 FIBCD1Q8N539 461 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 NLRP7Q8WX94 980 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 HAS1Q92839 578 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 JPH2Q9BR39 696 aaPredicted RBP14.45□□□□□ -0.1
CHMP3-208ENST00000486404 C17orf80Q9BSJ5 609 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 ERVK-5Q9HDB9 667 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 THEGQ9P2T0 379 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 NOC2LQ9Y3T9 749 aaKnown RBP14.45□□□□□ -0.1
CHMP3-208ENST00000486404 RWDD3Q9Y3V2 267 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 ATG2AQ2TAZ0 1938 aa14.45□□□□□ -0.1
CHMP3-208ENST00000486404 P4HBP07237 508 aaKnown RBP14.44□□□□□ -0.1
CHMP3-208ENST00000486404 CTNNB1P35222 781 aa14.44□□□□□ -0.1
CHMP3-208ENST00000486404 NLRP11P59045 1033 aaKnown RBP14.44□□□□□ -0.1
CHMP3-208ENST00000486404 CYP4A11Q02928 519 aa14.44□□□□□ -0.1
CHMP3-208ENST00000486404 BTG3Q14201 252 aaPredicted RBP14.44□□□□□ -0.1
CHMP3-208ENST00000486404 FAM43BQ6ZT52 329 aaPredicted RBP14.44□□□□□ -0.1
CHMP3-208ENST00000486404 LINC01465Q8N7H1 131 aa14.44□□□□□ -0.1
CHMP3-208ENST00000486404 IL27Q8NEV9 243 aa14.44□□□□□ -0.1
CHMP3-208ENST00000486404 TMEM40Q8WWA1 233 aa14.44□□□□□ -0.1
CHMP3-208ENST00000486404 SLC7A3Q8WY07 619 aa14.44□□□□□ -0.1
CHMP3-208ENST00000486404 SH2D3AQ9BRG2 576 aa14.44□□□□□ -0.1
CHMP3-208ENST00000486404 NIFKQ9BYG3 293 aaKnown RBP14.44□□□□□ -0.1
CHMP3-208ENST00000486404 C1orf112Q9NSG2 853 aa14.44□□□□□ -0.1
CHMP3-208ENST00000486404 NOL7Q9UMY1 257 aaKnown RBP14.44□□□□□ -0.1
CHMP3-208ENST00000486404 ST3GAL5Q9UNP4 418 aa14.44□□□□□ -0.1
CHMP3-208ENST00000486404 MTCH2Q9Y6C9 303 aa14.44□□□□□ -0.1
CHMP3-208ENST00000486404 UNC80Q8N2C7 3258 aa14.44□□□□□ -0.1
CHMP3-208ENST00000486404 GPR32O75388 356 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 MCM7P33993 719 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 GPC3P51654 580 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 POLGP54098 1239 aaPredicted RBP14.43□□□□□ -0.1
CHMP3-208ENST00000486404 EPHA7Q15375 998 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 TARBP2Q15633 366 aaKnown RBP14.43□□□□□ -0.1
CHMP3-208ENST00000486404 PTPROQ16827 1216 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 EPC2Q52LR7 807 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 ANO5Q75V66 913 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 FAM228AQ86W67 206 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 TMEM192Q8IY95 271 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 EXOC8Q8IYI6 725 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 ZNF668Q96K58 619 aaPredicted RBP14.43□□□□□ -0.1
CHMP3-208ENST00000486404 CEP170P1Q96L14 293 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 ADAM2Q99965 735 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 FOXP1Q9H334 677 aaPredicted RBP14.43□□□□□ -0.1
CHMP3-208ENST00000486404 TMX1Q9H3N1 280 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 CDHR5Q9HBB8 845 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 CYP26B1Q9NR63 512 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 PCDHA12Q9UN75 941 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 PRUNE2Q8WUY3 3088 aa14.43□□□□□ -0.1
CHMP3-208ENST00000486404 YWHABP31946 246 aaKnown RBP14.42□□□□□ -0.1
CHMP3-208ENST00000486404 TXKP42681 527 aa14.42□□□□□ -0.1
CHMP3-208ENST00000486404 SARSP49591 514 aaKnown RBP14.42□□□□□ -0.1
CHMP3-208ENST00000486404 MCM2P49736 904 aa14.42□□□□□ -0.1
CHMP3-208ENST00000486404 PAN2Q504Q3 1202 aaKnown RBP14.42□□□□□ -0.1
CHMP3-208ENST00000486404 OTUD6AQ7L8S5 288 aa14.42□□□□□ -0.1
CHMP3-208ENST00000486404 RHPN2Q8IUC4 686 aa14.42□□□□□ -0.1
CHMP3-208ENST00000486404 NOSTRINQ8IVI9 506 aa14.42□□□□□ -0.1
CHMP3-208ENST00000486404 FBXO18Q8NFZ0 1043 aa14.42□□□□□ -0.1
CHMP3-208ENST00000486404 NEK9Q8TD19 979 aa14.42□□□□□ -0.1
CHMP3-208ENST00000486404 DYDC2Q96IM9 177 aa14.42□□□□□ -0.1
CHMP3-208ENST00000486404 NLRP4Q96MN2 994 aa14.42□□□□□ -0.1
CHMP3-208ENST00000486404 TBC1D32Q96NH3 1257 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms