RNA–Protein interactions for RNA: ENST00000486086.1

GTF2IRD1-206, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 2

Gene GTF2IRD1, Length 440 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-206ENST00000486086 MMP19Q99542 508 aa4.74□□□□□ -1.65
GTF2IRD1-206ENST00000486086 LNPKQ9C0E8 428 aa4.74□□□□□ -1.65
GTF2IRD1-206ENST00000486086 AKT3Q9Y243 479 aa4.74□□□□□ -1.65
GTF2IRD1-206ENST00000486086 NUDCQ9Y266 331 aa4.74□□□□□ -1.65
GTF2IRD1-206ENST00000486086 SUGT1Q9Y2Z0 365 aa4.74□□□□□ -1.65
GTF2IRD1-206ENST00000486086 CD2APQ9Y5K6 639 aa4.74□□□□□ -1.65
GTF2IRD1-206ENST00000486086 CNTNAP1P78357 1384 aa4.74□□□□□ -1.65
GTF2IRD1-206ENST00000486086 APAF1O14727 1248 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 IGSF3O75054 1194 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 NTRK1P04629 796 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 SARSP49591 514 aaKnown RBP4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 MFAP1P55081 439 aaKnown RBP4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 GJA9P57773 515 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 PPP2R5EQ16537 467 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 PLEKHO1Q53GL0 409 aaPredicted RBP4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 C1orf141Q5JVX7 400 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 KIAA1211LQ6NV74 962 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 VHLLQ6RSH7 139 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 HHIPL2Q6UWX4 724 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 COL23A1Q86Y22 540 aaPredicted RBP4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 PLEKHO2Q8TD55 490 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 USP33Q8TEY7 942 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 PCDH18Q9HCL0 1135 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 NTMQ9P121 344 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 APEX2Q9UBZ4 518 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 EMC9Q9Y3B6 208 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 DUSP10Q9Y6W6 482 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 PALLDQ8WX93 1383 aa4.73□□□□□ -1.65
GTF2IRD1-206ENST00000486086 COL24A1Q17RW2 1714 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 K7ESM1 405 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 RNMTO43148 476 aaKnown RBP4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 KCNQ3O43525 872 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 FUCA1P04066 466 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 C8BP07358 591 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 PLS3P13797 630 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 TMPOP42166 694 aaKnown RBP4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 NASPP49321 788 aaPredicted RBP4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 ZNF143P52747 638 aaPredicted RBP4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 SLC39A6Q13433 755 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 KCTD2Q14681 263 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 NFE2L2Q16236 605 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 ZXDCQ2QGD7 858 aaPredicted RBP4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 MBLAC2Q68D91 279 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 POMZP3Q6PJE2 187 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 TTLL7Q6ZT98 887 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 SMIM5Q71RC9 77 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 ZNF761Q86XN6 746 aaPredicted RBP4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 NT5DC4Q86YG4 428 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 DCP2Q8IU60 420 aaKnown RBP4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 IFNL2Q8IZJ0 200 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 CRACR2BQ8N4Y2 399 aaPredicted RBP4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 BVESQ8NE79 360 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 IL17REQ8NFR9 667 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 DPF3Q92784 378 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 ZBTB8AQ96BR9 441 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 SEC16BQ96JE7 1060 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 APBA2Q99767 749 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 MIS18AQ9NYP9 233 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 CLEC1BQ9P126 229 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 CEMIPQ8WUJ3 1361 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 PLEKHG2Q9H7P9 1386 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 SCN7AQ01118 1682 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 BCORQ6W2J9 1755 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 EPG5Q9HCE0 2579 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 QSER1Q2KHR3 1735 aa4.72□□□□□ -1.65
GTF2IRD1-206ENST00000486086 ZNF831Q5JPB2 1677 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 PRAMEF22A3QJZ6 481 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 CCER2I3L3R5 266 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 KCNH1O95259 989 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 ITGB3P05106 788 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 CYP2C8P10632 490 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 CNR2P34972 360 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 RIPK4P57078 832 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 HDLBPQ00341 1268 aaKnown RBP4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 SCRN1Q12765 414 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 KRT24Q2M2I5 525 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 AMOTQ4VCS5 1084 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 FAM169BQ8N8A8 192 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 ADAMTS17Q8TE56 1095 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 CPLX3Q8WVH0 158 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 DDX1Q92499 740 aaKnown RBP4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 PIGBQ92521 554 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 RUNDC1Q96C34 613 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 DDX11Q96FC9 970 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 GORASP1Q9BQQ3 440 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 GPRC5CQ9NQ84 441 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 TMOD3Q9NYL9 352 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 ASAP1Q9ULH1 1129 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 SIT1Q9Y3P8 196 aa4.71□□□□□ -1.66
GTF2IRD1-206ENST00000486086 SGSM2O43147 1006 aa4.7□□□□□ -1.66
GTF2IRD1-206ENST00000486086 SMARCA5O60264 1052 aaPredicted RBP4.7□□□□□ -1.66
GTF2IRD1-206ENST00000486086 NAT2P11245 290 aa4.7□□□□□ -1.66
GTF2IRD1-206ENST00000486086 MAGEA10P43363 369 aaPredicted RBP4.7□□□□□ -1.66
GTF2IRD1-206ENST00000486086 PIP4K2AP48426 406 aaPredicted RBP4.7□□□□□ -1.66
GTF2IRD1-206ENST00000486086 SMAD4Q13485 552 aaKnown RBP4.7□□□□□ -1.66
GTF2IRD1-206ENST00000486086 ITPK1Q13572 414 aa4.7□□□□□ -1.66
GTF2IRD1-206ENST00000486086 ETV3LQ6ZN32 361 aa4.7□□□□□ -1.66
GTF2IRD1-206ENST00000486086 MIB1Q86YT6 1006 aa4.7□□□□□ -1.66
GTF2IRD1-206ENST00000486086 TRIM59Q8IWR1 403 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms