RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 GTPBP6O43824 516 aaPredicted RBP19.08■□□□□ 0.64
VIM-205ENST00000485947 EDIL3O43854 480 aa19.08■□□□□ 0.64
VIM-205ENST00000485947 GAS7O60861 476 aa19.08■□□□□ 0.64
VIM-205ENST00000485947 GCFC2P16383 781 aaKnown RBP19.08■□□□□ 0.64
VIM-205ENST00000485947 ADGRE1Q14246 886 aa19.08■□□□□ 0.64
VIM-205ENST00000485947 FBXO47Q5MNV8 452 aa19.08■□□□□ 0.64
VIM-205ENST00000485947 ODR4Q5SWX8 454 aa19.08■□□□□ 0.64
VIM-205ENST00000485947 SAMD11Q96NU1 681 aa19.08■□□□□ 0.64
VIM-205ENST00000485947 TEKT3Q9BXF9 490 aa19.08■□□□□ 0.64
VIM-205ENST00000485947 CDY2AQ9Y6F7 541 aa19.08■□□□□ 0.64
VIM-205ENST00000485947 GOLGA6L4A6NEF3 574 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 MAGEB2O15479 319 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 ATP2B1P20020 1258 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 KLRC1P26715 233 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 ERVK-21P61565 698 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 NBR1Q14596 966 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 LPIN1Q14693 890 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 LRCH2Q5VUJ6 765 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 PPP4R3AQ6IN85 833 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.07■□□□□ 0.642e-13■■■■■ 54.3
VIM-205ENST00000485947 CKAP2LQ8IYA6 745 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 MYOCDQ8IZQ8 938 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 SP7Q8TDD2 431 aaPredicted RBP19.07■□□□□ 0.64
VIM-205ENST00000485947 TGS1Q96RS0 853 aaKnown RBP19.07■□□□□ 0.64
VIM-205ENST00000485947 CELF4Q9BZC1 486 aaKnown RBP19.07■□□□□ 0.64
VIM-205ENST00000485947 TSPYL2Q9H2G4 693 aaPredicted RBP19.07■□□□□ 0.64
VIM-205ENST00000485947 DISC1Q9NRI5 854 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 NRBP2Q9NSY0 501 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 SAMM50Q9Y512 469 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 TRPV2Q9Y5S1 764 aa19.07■□□□□ 0.64
VIM-205ENST00000485947 BDP1A6H8Y1 2624 aa19.06■□□□□ 0.64
VIM-205ENST00000485947 IGSF9BQ9UPX0 1349 aa19.06■□□□□ 0.64
VIM-205ENST00000485947 GBF1Q92538 1859 aa19.06■□□□□ 0.64
VIM-205ENST00000485947 LAD1O00515 517 aa19.06■□□□□ 0.64
VIM-205ENST00000485947 PSMD10O75832 226 aa19.06■□□□□ 0.64
VIM-205ENST00000485947 IGFBP4P22692 258 aa19.06■□□□□ 0.64
VIM-205ENST00000485947 ME1P48163 572 aa19.06■□□□□ 0.64
VIM-205ENST00000485947 FAM20AQ96MK3 541 aa19.06■□□□□ 0.64
VIM-205ENST00000485947 FAM49AQ9H0Q0 323 aaPredicted RBP19.06■□□□□ 0.64
VIM-205ENST00000485947 RNF216Q9NWF9 866 aaPredicted RBP19.06■□□□□ 0.64
VIM-205ENST00000485947 COL4A6Q14031 1691 aa19.05■□□□□ 0.64
VIM-205ENST00000485947 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.05■□□□□ 0.64
VIM-205ENST00000485947 A0A1W2PQ27 194 aa19.05■□□□□ 0.64
VIM-205ENST00000485947 A0A1W2PQ64 194 aa19.05■□□□□ 0.64
VIM-205ENST00000485947 A0A1W2PQD8 194 aa19.05■□□□□ 0.64
VIM-205ENST00000485947 TBX3O15119 743 aa19.05■□□□□ 0.64
VIM-205ENST00000485947 GHRP10912 638 aa19.05■□□□□ 0.64
VIM-205ENST00000485947 ATP4AP20648 1035 aa19.05■□□□□ 0.64
VIM-205ENST00000485947 ATP2C1P98194 919 aaPredicted RBP19.05■□□□□ 0.64
VIM-205ENST00000485947 ZNF174Q15697 407 aa19.05■□□□□ 0.64
VIM-205ENST00000485947 KLHL40Q2TBA0 621 aa19.05■□□□□ 0.64
VIM-205ENST00000485947 LETM2Q2VYF4 491 aa19.05■□□□□ 0.64
VIM-205ENST00000485947 ARL6IP4Q66PJ3 421 aaKnown RBP19.05■□□□□ 0.64
VIM-205ENST00000485947 ADALQ6DHV7 355 aa19.05■□□□□ 0.64
VIM-205ENST00000485947 GABBR1Q9UBS5 961 aa19.05■□□□□ 0.64
VIM-205ENST00000485947 PCDHA7Q9UN72 937 aa19.05■□□□□ 0.64
VIM-205ENST00000485947 LINC01553A4QN01 128 aa19.04■□□□□ 0.64
VIM-205ENST00000485947 WNT7AO00755 349 aa19.04■□□□□ 0.64
VIM-205ENST00000485947 TRAK2O60296 914 aa19.04■□□□□ 0.64
VIM-205ENST00000485947 CCNT1O60563 726 aaKnown RBP19.04■□□□□ 0.64
VIM-205ENST00000485947 CUTAO60888 179 aa19.04■□□□□ 0.64
VIM-205ENST00000485947 GADD45BO75293 160 aaPredicted RBP19.04■□□□□ 0.64
VIM-205ENST00000485947 MCM7P33993 719 aa19.04■□□□□ 0.64
VIM-205ENST00000485947 B3GNT9Q6UX72 402 aa19.04■□□□□ 0.64
VIM-205ENST00000485947 KIAA0319LQ8IZA0 1049 aa19.04■□□□□ 0.64
VIM-205ENST00000485947 KRI1Q8N9T8 703 aaKnown RBP19.04■□□□□ 0.64
VIM-205ENST00000485947 ATXN2LQ8WWM7 1075 aaKnown RBP19.04■□□□□ 0.64
VIM-205ENST00000485947 ARNTL2Q8WYA1 636 aa19.04■□□□□ 0.64
VIM-205ENST00000485947 FAM122AQ96E09 287 aa19.04■□□□□ 0.64
VIM-205ENST00000485947 YME1L1Q96TA2 773 aa19.04■□□□□ 0.64
VIM-205ENST00000485947 DDX25Q9UHL0 483 aaKnown RBP19.04■□□□□ 0.64
VIM-205ENST00000485947 SRPRBQ9Y5M8 271 aaKnown RBP19.04■□□□□ 0.64
VIM-205ENST00000485947 MICAL3Q7RTP6 2002 aa19.03■□□□□ 0.64
VIM-205ENST00000485947 LCHNA4D1U4 455 aa19.03■□□□□ 0.64
VIM-205ENST00000485947 ZBTB42B2RXF5 422 aa19.03■□□□□ 0.64
VIM-205ENST00000485947 ENPP3O14638 875 aa19.03■□□□□ 0.64
VIM-205ENST00000485947 C22orf31O95567 290 aa19.03■□□□□ 0.64
VIM-205ENST00000485947 TMOD1P28289 359 aa19.03■□□□□ 0.64
VIM-205ENST00000485947 HOXD11P31277 338 aaPredicted RBP19.03■□□□□ 0.64
VIM-205ENST00000485947 PRPHP41219 470 aa19.03■□□□□ 0.64
VIM-205ENST00000485947 CDC42EP1Q00587 391 aa19.03■□□□□ 0.64
VIM-205ENST00000485947 PTGDRQ13258 359 aa19.03■□□□□ 0.64
VIM-205ENST00000485947 ETNPPLQ8TBG4 499 aa19.03■□□□□ 0.64
VIM-205ENST00000485947 TRAPPC12Q8WVT3 735 aa19.03■□□□□ 0.64
VIM-205ENST00000485947 MTCH2Q9Y6C9 303 aa19.03■□□□□ 0.64
VIM-205ENST00000485947 CHD9Q3L8U1 2897 aa19.03■□□□□ 0.64
VIM-205ENST00000485947 NEMFO60524 1076 aa19.02■□□□□ 0.64
VIM-205ENST00000485947 DKC1O60832 514 aaKnown RBP eCLIP19.02■□□□□ 0.64
VIM-205ENST00000485947 TDP2O95551 362 aa19.02■□□□□ 0.64
VIM-205ENST00000485947 OATP04181 439 aa19.02■□□□□ 0.64
VIM-205ENST00000485947 MARCKSP29966 332 aaPredicted RBP19.02■□□□□ 0.64
VIM-205ENST00000485947 PAK2Q13177 524 aa19.02■□□□□ 0.64
VIM-205ENST00000485947 MIER3Q7Z3K6 550 aa19.02■□□□□ 0.64
VIM-205ENST00000485947 TMCO2Q7Z6W1 182 aaPredicted RBP19.02■□□□□ 0.64
VIM-205ENST00000485947 ZNF579Q8NAF0 562 aaKnown RBP19.02■□□□□ 0.64
VIM-205ENST00000485947 OSBPL7Q9BZF2 842 aa19.02■□□□□ 0.64
VIM-205ENST00000485947 UNC45AQ9H3U1 944 aa19.02■□□□□ 0.64
VIM-205ENST00000485947 FBXO2Q9UK22 296 aaPredicted RBP19.02■□□□□ 0.64
VIM-205ENST00000485947 RWDD3Q9Y3V2 267 aa19.02■□□□□ 0.64
VIM-205ENST00000485947 GPR182O15218 404 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms