RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 ZNF333Q96JL9 665 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 FAM167AQ96KS9 214 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 FIZ1Q96SL8 496 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 DNAJC25Q9H1X3 360 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 RNPEPQ9H4A4 650 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 DHX33Q9H6R0 707 aaKnown RBP12.56□□□□□ -0.4
SND1-212ENST00000485871 AZI2Q9H6S1 392 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 CYP26B1Q9NR63 512 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 ANO10Q9NW15 660 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 RMND1Q9NWS8 449 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 ERAP1Q9NZ08 941 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 SEPT9Q9UHD8 586 aaPredicted RBP12.56□□□□□ -0.4
SND1-212ENST00000485871 ODF2LQ9ULJ1 636 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 GDAQ9Y2T3 454 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 SYNRGQ9UMZ2 1314 aa12.56□□□□□ -0.4
SND1-212ENST00000485871 PPP1R3GB7ZBB8 358 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 HBP1O60381 514 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 USO1O60763 962 aaKnown RBP12.55□□□□□ -0.4
SND1-212ENST00000485871 HIP1RO75146 1068 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 MYCP01106 439 aaPredicted RBP12.55□□□□□ -0.4
SND1-212ENST00000485871 TPM3P06753 285 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 ZNF286BP0CG31 522 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 MARK3P27448 753 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 CST5P28325 142 aaPredicted RBP12.55□□□□□ -0.4
SND1-212ENST00000485871 GRK4P32298 578 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 RAD51AP2Q09MP3 1159 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 MTERF2Q49AM1 385 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 COBLL1Q53SF7 1204 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 ZSCAN30Q86W11 494 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 CCDC65Q8IXS2 484 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 SMYD4Q8IYR2 804 aaPredicted RBP12.55□□□□□ -0.4
SND1-212ENST00000485871 KLHDC9Q8NEP7 349 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 DPF3Q92784 378 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 GLG1Q92896 1179 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 HPS3Q969F9 1004 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 CEP170P1Q96L14 293 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 MED15Q96RN5 788 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 TIPINQ9BVW5 301 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 FGFBP2Q9BYJ0 223 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 BMP2KQ9NSY1 1161 aaPredicted RBP12.55□□□□□ -0.4
SND1-212ENST00000485871 PANK4Q9NVE7 773 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 PPME1Q9Y570 386 aa12.55□□□□□ -0.4
SND1-212ENST00000485871 IGKV6-21A0A0C4DH24 114 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 H3BRB1 525 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 DGAT1O75907 488 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 IDEP14735 1019 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 CLCN1P35523 988 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 CPT1AP50416 773 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 BEX3Q00994 111 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 STK4Q13043 487 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 IQCB1Q15051 598 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 FSCN1Q16658 493 aaKnown RBP12.54□□□□□ -0.4
SND1-212ENST00000485871 CCSAPQ6IQ19 270 aaPredicted RBP12.54□□□□□ -0.4
SND1-212ENST00000485871 TRMT1LQ7Z2T5 733 aaKnown RBP12.54□□□□□ -0.4
SND1-212ENST00000485871 SFR1Q86XK3 245 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 MLKLQ8NB16 471 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 GLIS3Q8NEA6 775 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 BPIFA3Q9BQP9 254 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 NAT10Q9H0A0 1025 aaKnown RBP12.54□□□□□ -0.4
SND1-212ENST00000485871 AP5M1Q9H0R1 490 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 TUT1Q9H6E5 874 aaKnown RBP12.54□□□□□ -0.4
SND1-212ENST00000485871 POLD4Q9HCU8 107 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 OLFML3Q9NRN5 406 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 NRBP2Q9NSY0 501 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 EXOC1Q9NV70 894 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 DDX20Q9UHI6 824 aaKnown RBP12.54□□□□□ -0.4
SND1-212ENST00000485871 COL1A2P08123 1366 aa12.54□□□□□ -0.4
SND1-212ENST00000485871 GOLGA6L6A8MZA4 724 aa12.53□□□□□ -0.4
SND1-212ENST00000485871 MAFO75444 373 aaPredicted RBP12.53□□□□□ -0.4
SND1-212ENST00000485871 RARBP10826 455 aa12.53□□□□□ -0.4
SND1-212ENST00000485871 MSNP26038 577 aaKnown RBP12.53□□□□□ -0.4
SND1-212ENST00000485871 RFC5P40937 340 aa12.53□□□□□ -0.4
SND1-212ENST00000485871 PRCPP42785 496 aa12.53□□□□□ -0.4
SND1-212ENST00000485871 PURAQ00577 322 aaKnown RBP12.53□□□□□ -0.4
SND1-212ENST00000485871 PSMD2Q13200 908 aa12.53□□□□□ -0.4
SND1-212ENST00000485871 FAM26FQ5R3K3 315 aa12.53□□□□□ -0.4
SND1-212ENST00000485871 LHX8Q68G74 356 aa12.53□□□□□ -0.4
SND1-212ENST00000485871 EPM2AIP1Q7L775 607 aaPredicted RBP12.53□□□□□ -0.4
SND1-212ENST00000485871 LINC01465Q8N7H1 131 aa12.53□□□□□ -0.4
SND1-212ENST00000485871 STRA6Q9BX79 667 aa12.53□□□□□ -0.4
SND1-212ENST00000485871 GPRC5CQ9NQ84 441 aa12.53□□□□□ -0.4
SND1-212ENST00000485871 SEL1LQ9UBV2 794 aa12.53□□□□□ -0.4
SND1-212ENST00000485871 HTTP42858 3142 aa12.53□□□□□ -0.4
SND1-212ENST00000485871 CENPFP49454 3210 aa12.52□□□□□ -0.4
SND1-212ENST00000485871 SFI1A8K8P3 1242 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 TBCAO75347 108 aaKnown RBP12.52□□□□□ -0.41
SND1-212ENST00000485871 PPP1R37O75864 691 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 FAM13AO94988 1023 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 PGK1P00558 417 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 KRT18P05783 430 aaKnown RBP12.52□□□□□ -0.41
SND1-212ENST00000485871 INSRRP14616 1297 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 GAP43P17677 238 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 CNGA1P29973 690 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 HOXC8P31273 242 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 ZNF165P49910 485 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 CASP5P51878 434 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 RTP1P59025 263 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 ADAM17P78536 824 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 MKRN4PQ13434 485 aaPredicted RBP12.52□□□□□ -0.41
SND1-212ENST00000485871 NCAPHQ15003 741 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms