RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 SPATA33Q96N06 139 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 MED15Q96RN5 788 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 TINF2Q9BSI4 451 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 HSD3B7Q9H2F3 369 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 BCAS3Q9H6U6 928 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 OLFML3Q9NRN5 406 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 PCDHB13Q9Y5F0 798 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 CENPFP49454 3210 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 SYNGAP1Q96PV0 1343 aa10.53□□□□□ -0.72
CTSA-208ENST00000485627 LCTP09848 1927 aa10.52□□□□□ -0.72
CTSA-208ENST00000485627 GSTTP1A0A1W2PQM5 241 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 SFI1A8K8P3 1242 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 PES1O00541 588 aaKnown RBP10.52□□□□□ -0.73
CTSA-208ENST00000485627 TNPO2O14787 897 aaKnown RBP10.52□□□□□ -0.73
CTSA-208ENST00000485627 EIF3DO15371 548 aaKnown RBP eCLIP10.52□□□□□ -0.73
CTSA-208ENST00000485627 ZNF862O60290 1169 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 DGAT1O75907 488 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 ARIH2O95376 493 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 GH1P01241 217 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 OATP04181 439 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 EEF1GP26641 437 aaKnown RBP10.52□□□□□ -0.73
CTSA-208ENST00000485627 TCF7P36402 384 aaPredicted RBP10.52□□□□□ -0.73
CTSA-208ENST00000485627 RGS2P41220 211 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 MTIF2P46199 727 aaKnown RBP10.52□□□□□ -0.73
CTSA-208ENST00000485627 STAT5BP51692 787 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 ZNF131P52739 623 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 PMS1P54277 932 aaKnown RBP10.52□□□□□ -0.73
CTSA-208ENST00000485627 NPEPPSP55786 919 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 ALCAMQ13740 583 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 KNOP1Q1ED39 458 aaKnown RBP10.52□□□□□ -0.73
CTSA-208ENST00000485627 TCP11X2Q5H9J9 407 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 MORN1Q5T089 497 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 CCDC62Q6P9F0 684 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 FOXR2Q6PJQ5 311 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 MCPH1Q8NEM0 835 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 SOCS4Q8WXH5 440 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 KIFAP3Q92845 792 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 SEMA6BQ9H3T3 888 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 ABHD16BQ9H3Z7 469 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 ATP6V0A4Q9HBG4 840 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 CYP26B1Q9NR63 512 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 PDGFCQ9NRA1 345 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 KCNG1Q9UIX4 513 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 ZHX1Q9UKY1 873 aaPredicted RBP10.52□□□□□ -0.73
CTSA-208ENST00000485627 PCDHB8Q9UN66 801 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 PCDHA2Q9Y5H9 948 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 MAFBQ9Y5Q3 323 aaPredicted RBP10.52□□□□□ -0.73
CTSA-208ENST00000485627 IGSF9BQ9UPX0 1349 aa10.52□□□□□ -0.73
CTSA-208ENST00000485627 BRCA2P51587 3418 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 SZT2Q5T011 3432 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 IGKV6D-21A0A0A0MT36 114 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 RBM47A0AV96 593 aaKnown RBP10.51□□□□□ -0.73
CTSA-208ENST00000485627 TMEM150BA6NC51 233 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 K7ENM7 598 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 N4BP3O15049 544 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 NKRFO15226 690 aaKnown RBP eCLIP10.51□□□□□ -0.73
CTSA-208ENST00000485627 PRPF6O94906 941 aaKnown RBP10.51□□□□□ -0.73
CTSA-208ENST00000485627 MYCP01106 439 aaPredicted RBP10.51□□□□□ -0.73
CTSA-208ENST00000485627 MYBP10242 640 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 MAPTP10636 758 aaKnown RBP10.51□□□□□ -0.73
CTSA-208ENST00000485627 PLS3P13797 630 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 SMTNP53814 917 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 POLGP54098 1239 aaPredicted RBP10.51□□□□□ -0.73
CTSA-208ENST00000485627 FCGRTP55899 365 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 GSDMDP57764 484 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 FKBP3Q00688 224 aaKnown RBP10.51□□□□□ -0.73
CTSA-208ENST00000485627 ACVR2BQ13705 512 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 KIF22Q14807 665 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 MTERF2Q49AM1 385 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 TAPT1Q6NXT6 567 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 ANO5Q75V66 913 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 TMC6Q7Z403 805 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 FILIP1Q7Z7B0 1213 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 EXOC8Q8IYI6 725 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 GLIS3Q8NEA6 775 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 NPLOC4Q8TAT6 608 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 AFAP1L1Q8TED9 768 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 SCFD1Q8WVM8 642 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 IFT74Q96LB3 600 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 NAP1L5Q96NT1 182 aaPredicted RBP10.51□□□□□ -0.73
CTSA-208ENST00000485627 GPR20Q99678 358 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 DUSP9Q99956 384 aaKnown RBP10.51□□□□□ -0.73
CTSA-208ENST00000485627 SH2D3AQ9BRG2 576 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 SMARCAD1Q9H4L7 1026 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 POLD4Q9HCU8 107 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 IMPACTQ9P2X3 320 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 LIMA1Q9UHB6 759 aaKnown RBP10.51□□□□□ -0.73
CTSA-208ENST00000485627 FARP1Q9Y4F1 1045 aaPredicted RBP10.51□□□□□ -0.73
CTSA-208ENST00000485627 PPME1Q9Y570 386 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 CEP290O15078 2479 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 UBE4BO95155 1302 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 PLXNB2O15031 1838 aa10.51□□□□□ -0.73
CTSA-208ENST00000485627 KIAA1217Q5T5P2 1943 aa10.5□□□□□ -0.73
CTSA-208ENST00000485627 A0A1B0GTH6 734 aa10.5□□□□□ -0.73
CTSA-208ENST00000485627 H0YCG3 227 aa10.5□□□□□ -0.73
CTSA-208ENST00000485627 DLL1O00548 723 aa10.5□□□□□ -0.73
CTSA-208ENST00000485627 PDXKO00764 312 aa10.5□□□□□ -0.73
CTSA-208ENST00000485627 CETN3O15182 167 aa10.5□□□□□ -0.73
CTSA-208ENST00000485627 NRDCO43847 1150 aa10.5□□□□□ -0.73
CTSA-208ENST00000485627 GNA14O95837 355 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms