RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 GUCY2CP25092 1073 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 KLRC1P26715 233 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 POLGP54098 1239 aaPredicted RBP19.53■□□□□ 0.72
CHMP3-207ENST00000485465 ADAM17P78536 824 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 PTPN11Q06124 597 aaPredicted RBP19.53■□□□□ 0.72
CHMP3-207ENST00000485465 HIC1Q14526 733 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 FAM47CQ5HY64 1035 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 MARCH8Q5T0T0 291 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 MTHFD1LQ6UB35 978 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 SLC43A3Q8NBI5 491 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 SLC7A3Q8WY07 619 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 DDX12PQ92771 950 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 TRIM9Q9C026 710 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 ATP6V0A4Q9HBG4 840 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 GTF2IRD1Q9UHL9 959 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 IGKV6-21A0A0C4DH24 114 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 KRT18P05783 430 aaKnown RBP19.52■□□□□ 0.72
CHMP3-207ENST00000485465 MYL1P05976 194 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 PRR29P0C7W0 189 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 COL6A1P12109 1028 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 CASP1P29466 404 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 CUL4BQ13620 913 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 GIT2Q14161 759 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 EMC2Q15006 297 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 POSTNQ15063 836 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 CAMK4Q16566 473 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 CNNM4Q6P4Q7 775 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 DYMQ7RTS9 669 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 MCPH1Q8NEM0 835 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 DIS3LQ8TF46 1054 aaKnown RBP19.52■□□□□ 0.72
CHMP3-207ENST00000485465 JPH2Q9BR39 696 aaPredicted RBP19.52■□□□□ 0.72
CHMP3-207ENST00000485465 TIPINQ9BVW5 301 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 SEZ6LQ9BYH1 1024 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 SENP6Q9GZR1 1112 aaPredicted RBP19.52■□□□□ 0.72
CHMP3-207ENST00000485465 NUP62CLQ9H1M0 184 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 BLZF1Q9H2G9 400 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 XPNPEP1Q9NQW7 623 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 LOXHD1Q8IVV2 1947 aa19.52■□□□□ 0.72
CHMP3-207ENST00000485465 MBLAC1A4D2B0 266 aaPredicted RBP19.51■□□□□ 0.71
CHMP3-207ENST00000485465 ARVCFO00192 962 aa19.51■□□□□ 0.71
CHMP3-207ENST00000485465 ZNF200P98182 395 aaPredicted RBP19.51■□□□□ 0.71
CHMP3-207ENST00000485465 RAD51AP2Q09MP3 1159 aa19.51■□□□□ 0.71
CHMP3-207ENST00000485465 PNOCQ13519 176 aa19.51■□□□□ 0.71
CHMP3-207ENST00000485465 GDF6Q6KF10 455 aaPredicted RBP19.51■□□□□ 0.71
CHMP3-207ENST00000485465 MAEAQ7L5Y9 396 aa19.51■□□□□ 0.71
CHMP3-207ENST00000485465 RETREG2Q8NC44 543 aa19.51■□□□□ 0.71
CHMP3-207ENST00000485465 DNAJC19Q96DA6 116 aa19.51■□□□□ 0.71
CHMP3-207ENST00000485465 ZBTB10Q96DT7 871 aa19.51■□□□□ 0.71
CHMP3-207ENST00000485465 REEP2Q9BRK0 252 aa19.51■□□□□ 0.71
CHMP3-207ENST00000485465 TUBE1Q9UJT0 475 aa19.51■□□□□ 0.71
CHMP3-207ENST00000485465 ARID2Q68CP9 1835 aa19.51■□□□□ 0.71
CHMP3-207ENST00000485465 TREHO43280 583 aa19.5■□□□□ 0.71
CHMP3-207ENST00000485465 GAS2O43903 313 aaKnown RBP19.5■□□□□ 0.71
CHMP3-207ENST00000485465 HIP1RO75146 1068 aa19.5■□□□□ 0.71
CHMP3-207ENST00000485465 EN2P19622 333 aaPredicted RBP19.5■□□□□ 0.71
CHMP3-207ENST00000485465 CDK7P50613 346 aa19.5■□□□□ 0.71
CHMP3-207ENST00000485465 DPYDQ12882 1025 aa19.5■□□□□ 0.71
CHMP3-207ENST00000485465 CCDC183Q5T5S1 534 aa19.5■□□□□ 0.71
CHMP3-207ENST00000485465 FAM102BQ5T8I3 360 aa19.5■□□□□ 0.71
CHMP3-207ENST00000485465 EFCAB12Q6NXP0 572 aa19.5■□□□□ 0.71
CHMP3-207ENST00000485465 CAVIN1Q6NZI2 390 aaKnown RBP19.5■□□□□ 0.71
CHMP3-207ENST00000485465 LINC01465Q8N7H1 131 aa19.5■□□□□ 0.71
CHMP3-207ENST00000485465 SUGCTQ9HAC7 445 aa19.5■□□□□ 0.71
CHMP3-207ENST00000485465 POLD4Q9HCU8 107 aa19.5■□□□□ 0.71
CHMP3-207ENST00000485465 TMEM63CQ9P1W3 806 aa19.5■□□□□ 0.71
CHMP3-207ENST00000485465 ODF2LQ9ULJ1 636 aa19.5■□□□□ 0.71
CHMP3-207ENST00000485465 PCDHA2Q9Y5H9 948 aa19.5■□□□□ 0.71
CHMP3-207ENST00000485465 SOX10P56693 466 aa19.49■□□□□ 0.71
CHMP3-207ENST00000485465 ASIC1P78348 528 aa19.49■□□□□ 0.71
CHMP3-207ENST00000485465 CACNB1Q02641 598 aaPredicted RBP19.49■□□□□ 0.71
CHMP3-207ENST00000485465 MAPK7Q13164 816 aa19.49■□□□□ 0.71
CHMP3-207ENST00000485465 MKRN4PQ13434 485 aaPredicted RBP19.49■□□□□ 0.71
CHMP3-207ENST00000485465 SLC39A5Q6ZMH5 540 aa19.49■□□□□ 0.71
CHMP3-207ENST00000485465 LRRC71Q8N4P6 559 aa19.49■□□□□ 0.71
CHMP3-207ENST00000485465 METTL13Q8N6R0 699 aa19.49■□□□□ 0.71
CHMP3-207ENST00000485465 TCP11Q8WWU5 503 aa19.49■□□□□ 0.71
CHMP3-207ENST00000485465 SYAP1Q96A49 352 aaPredicted RBP19.49■□□□□ 0.71
CHMP3-207ENST00000485465 TMEM143Q96AN5 459 aa19.49■□□□□ 0.71
CHMP3-207ENST00000485465 ABHD8Q96I13 439 aa19.49■□□□□ 0.71
CHMP3-207ENST00000485465 PAWRQ96IZ0 340 aaKnown RBP19.49■□□□□ 0.71
CHMP3-207ENST00000485465 C11orf49Q9H6J7 331 aa19.49■□□□□ 0.71
CHMP3-207ENST00000485465 GPRC5CQ9NQ84 441 aa19.49■□□□□ 0.71
CHMP3-207ENST00000485465 SMIM35A0A1B0GVV1 85 aa19.48■□□□□ 0.71
CHMP3-207ENST00000485465 RSPH10B2B2RC85 870 aa19.48■□□□□ 0.71
CHMP3-207ENST00000485465 SMC2O95347 1197 aa19.48■□□□□ 0.71
CHMP3-207ENST00000485465 RSPH10BP0C881 870 aa19.48■□□□□ 0.71
CHMP3-207ENST00000485465 CYP2C9P11712 490 aa19.48■□□□□ 0.71
CHMP3-207ENST00000485465 TMOD1P28289 359 aa19.48■□□□□ 0.71
CHMP3-207ENST00000485465 ARL2P36404 184 aa19.48■□□□□ 0.71
CHMP3-207ENST00000485465 DNM2P50570 870 aa19.48■□□□□ 0.71
CHMP3-207ENST00000485465 IER5Q5VY09 327 aa19.48■□□□□ 0.71
CHMP3-207ENST00000485465 NECAB2Q7Z6G3 386 aa19.48■□□□□ 0.71
CHMP3-207ENST00000485465 DAW1Q8N136 415 aa19.48■□□□□ 0.71
CHMP3-207ENST00000485465 KIFAP3Q92845 792 aa19.48■□□□□ 0.71
CHMP3-207ENST00000485465 ERCC4Q92889 916 aaPredicted RBP19.48■□□□□ 0.71
CHMP3-207ENST00000485465 DRC1Q96MC2 740 aa19.48■□□□□ 0.71
CHMP3-207ENST00000485465 POLR3FQ9H1D9 316 aaPredicted RBP19.48■□□□□ 0.71
CHMP3-207ENST00000485465 PVALEFA0A1B0GWK0 134 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 FRMD3A2A2Y4 597 aa19.47■□□□□ 0.71
CHMP3-207ENST00000485465 KLRC4O43908 158 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms