RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ERAP1Q9NZ08 941 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 ODF2LQ9ULJ1 636 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 Q9Y3F1 56 aa16.13■□□□□ 0.17
LRIF1-202ENST00000485275 INHAP05111 366 aa16.12■□□□□ 0.17
LRIF1-202ENST00000485275 CNGA1P29973 690 aa16.12■□□□□ 0.17
LRIF1-202ENST00000485275 DGKDQ16760 1214 aa16.12■□□□□ 0.17
LRIF1-202ENST00000485275 HERC4Q5GLZ8 1057 aaPredicted RBP16.12■□□□□ 0.17
LRIF1-202ENST00000485275 BBXQ8WY36 941 aaPredicted RBP16.12■□□□□ 0.17
LRIF1-202ENST00000485275 BSNDQ8WZ55 320 aa16.12■□□□□ 0.17
LRIF1-202ENST00000485275 CTNND2Q9UQB3 1225 aa16.12■□□□□ 0.17
LRIF1-202ENST00000485275 TRIM49BA6NDI0 452 aa16.11■□□□□ 0.17
LRIF1-202ENST00000485275 ADAMTS4O75173 837 aa16.11■□□□□ 0.17
LRIF1-202ENST00000485275 TBCAO75347 108 aaKnown RBP16.11■□□□□ 0.17
LRIF1-202ENST00000485275 PGK1P00558 417 aa16.11■□□□□ 0.17
LRIF1-202ENST00000485275 F2P00734 622 aa16.11■□□□□ 0.17
LRIF1-202ENST00000485275 SLC26A2P50443 739 aa16.11■□□□□ 0.17
LRIF1-202ENST00000485275 DRP2Q13474 957 aa16.11■□□□□ 0.17
LRIF1-202ENST00000485275 EMC2Q15006 297 aa16.11■□□□□ 0.17
LRIF1-202ENST00000485275 FAM167AQ96KS9 214 aa16.11■□□□□ 0.17
LRIF1-202ENST00000485275 UPF3AQ9H1J1 476 aaKnown RBP16.11■□□□□ 0.17
LRIF1-202ENST00000485275 PARVGQ9HBI0 331 aa16.11■□□□□ 0.17
LRIF1-202ENST00000485275 H3BRB1 525 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 DGAT1O75907 488 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 FAM13AO94988 1023 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 MYBP10242 640 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 HOXD13P35453 343 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 STX17P56962 302 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 GJA9P57773 515 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 FSCN1Q16658 493 aaKnown RBP16.1■□□□□ 0.17
LRIF1-202ENST00000485275 COBLL1Q53SF7 1204 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 EPM2AIP1Q7L775 607 aaPredicted RBP16.1■□□□□ 0.17
LRIF1-202ENST00000485275 SH3TC2Q8TF17 1288 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 SCFD1Q8WVM8 642 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 TUT1Q9H6E5 874 aaKnown RBP16.1■□□□□ 0.17
LRIF1-202ENST00000485275 OLFML3Q9NRN5 406 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 TRPC6Q9Y210 931 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 AP5Z1O43299 807 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 C6orf222P0C671 652 aaPredicted RBP16.1■□□□□ 0.17
LRIF1-202ENST00000485275 NMT1P30419 496 aaKnown RBP16.1■□□□□ 0.17
LRIF1-202ENST00000485275 GRK4P32298 578 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 MKRN4PQ13434 485 aaPredicted RBP16.1■□□□□ 0.17
LRIF1-202ENST00000485275 FAM102BQ5T8I3 360 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 MYCT1Q8N699 235 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 SLAIN1Q8ND83 568 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 ATP6V0A4Q9HBG4 840 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 NRBP2Q9NSY0 501 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 COL4A3BPQ9Y5P4 624 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 SCN10AQ9Y5Y9 1956 aa16.1■□□□□ 0.17
LRIF1-202ENST00000485275 SIP14410 1827 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 ADGRA3Q8IWK6 1321 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 CAVIN2O95810 425 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 INSRRP14616 1297 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 CPT1AP50416 773 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 POLGP54098 1239 aaPredicted RBP16.09■□□□□ 0.17
LRIF1-202ENST00000485275 PRMT2P55345 433 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 NKX3-2P78367 333 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 PURAQ00577 322 aaKnown RBP16.09■□□□□ 0.17
LRIF1-202ENST00000485275 KCNA1Q09470 495 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 PSMD2Q13200 908 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 HIC1Q14526 733 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 NELFBQ8WX92 580 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 CCDC47Q96A33 483 aaKnown RBP16.09■□□□□ 0.17
LRIF1-202ENST00000485275 TMEM143Q96AN5 459 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 KIFC3Q9BVG8 833 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 AP5M1Q9H0R1 490 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 IKZF4Q9H2S9 585 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 SEMA6BQ9H3T3 888 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 PTPN22Q9Y2R2 807 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 ZMYM2Q9UBW7 1377 aa16.09■□□□□ 0.17
LRIF1-202ENST00000485275 IGKV6-21A0A0C4DH24 114 aa16.08■□□□□ 0.17
LRIF1-202ENST00000485275 HBP1O60381 514 aa16.08■□□□□ 0.17
LRIF1-202ENST00000485275 MAFO75444 373 aaPredicted RBP16.08■□□□□ 0.17
LRIF1-202ENST00000485275 C22orf31O95567 290 aa16.08■□□□□ 0.17
LRIF1-202ENST00000485275 RARBP10826 455 aa16.08■□□□□ 0.17
LRIF1-202ENST00000485275 GAP43P17677 238 aa16.08■□□□□ 0.17
LRIF1-202ENST00000485275 ERCC5P28715 1186 aaPredicted RBP16.08■□□□□ 0.17
LRIF1-202ENST00000485275 PAK1Q13153 545 aa16.08■□□□□ 0.17
LRIF1-202ENST00000485275 ZC2HC1CQ53FD0 456 aaPredicted RBP16.08■□□□□ 0.17
LRIF1-202ENST00000485275 ODR4Q5SWX8 454 aa16.08■□□□□ 0.17
LRIF1-202ENST00000485275 KSR1Q8IVT5 923 aa16.08■□□□□ 0.17
LRIF1-202ENST00000485275 GUF1Q8N442 669 aaKnown RBP16.08■□□□□ 0.17
LRIF1-202ENST00000485275 LRRC71Q8N4P6 559 aa16.08■□□□□ 0.17
LRIF1-202ENST00000485275 ASAP3Q8TDY4 903 aa16.08■□□□□ 0.17
LRIF1-202ENST00000485275 STRA6Q9BX79 667 aa16.08■□□□□ 0.17
LRIF1-202ENST00000485275 NAT10Q9H0A0 1025 aaKnown RBP16.08■□□□□ 0.17
LRIF1-202ENST00000485275 POLR3FQ9H1D9 316 aaPredicted RBP16.08■□□□□ 0.17
LRIF1-202ENST00000485275 XPNPEP3Q9NQH7 507 aa16.08■□□□□ 0.17
LRIF1-202ENST00000485275 DDX20Q9UHI6 824 aaKnown RBP16.08■□□□□ 0.17
LRIF1-202ENST00000485275 ZNF215Q9UL58 517 aaPredicted RBP16.08■□□□□ 0.17
LRIF1-202ENST00000485275 EVPLQ92817 2033 aa16.08■□□□□ 0.17
LRIF1-202ENST00000485275 RBAK-RBAKDNI3L0D1 243 aa16.08■□□□□ 0.16
LRIF1-202ENST00000485275 HAS3O00219 553 aa16.08■□□□□ 0.16
LRIF1-202ENST00000485275 PPP1R37O75864 691 aa16.08■□□□□ 0.16
LRIF1-202ENST00000485275 MYL3P08590 195 aa16.08■□□□□ 0.16
LRIF1-202ENST00000485275 HSPA8P11142 646 aaKnown RBP16.08■□□□□ 0.16
LRIF1-202ENST00000485275 PLS3P13797 630 aa16.08■□□□□ 0.16
LRIF1-202ENST00000485275 IGBP1P78318 339 aa16.08■□□□□ 0.16
LRIF1-202ENST00000485275 MYL5Q02045 173 aa16.08■□□□□ 0.16
LRIF1-202ENST00000485275 ARHGEF6Q15052 776 aa16.08■□□□□ 0.16
LRIF1-202ENST00000485275 KIAA0753Q2KHM9 967 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms