RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ZBTB43O43298 467 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 GPR32O75388 356 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 C22orf31O95567 290 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 LAG3P18627 525 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 ZNF76P36508 570 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 ERVFC1P60507 584 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 SWSAP1Q6NVH7 229 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 FAM228AQ86W67 206 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 PLA2G4DQ86XP0 818 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 SMAP1Q8IYB5 467 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-227ENST00000485102 COLGALT1Q8NBJ5 622 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 VN1R2Q8NFZ6 395 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 MICAL1Q8TDZ2 1067 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 PBXIP1Q96AQ6 731 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 PGBD1Q96JS3 809 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 TMEM117Q9H0C3 514 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 S1PR5Q9H228 398 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 ATP6V0A4Q9HBG4 840 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 BRPF3Q9ULD4 1205 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 CEP131Q9UPN4 1083 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 GINS2Q9Y248 185 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 MAGEB2O15479 319 aa14.78□□□□□ -0.04
HDAC6-227ENST00000485102 HOXA2O43364 376 aa14.78□□□□□ -0.04
HDAC6-227ENST00000485102 PPFIA3O75145 1194 aa14.78□□□□□ -0.04
HDAC6-227ENST00000485102 CSPG5O95196 566 aa14.78□□□□□ -0.04
HDAC6-227ENST00000485102 PTPN5P54829 565 aa14.78□□□□□ -0.04
HDAC6-227ENST00000485102 SIGLEC14Q08ET2 396 aa14.78□□□□□ -0.04
HDAC6-227ENST00000485102 SPOUT1Q5T280 376 aaKnown RBP14.78□□□□□ -0.04
HDAC6-227ENST00000485102 FBXL6Q8N531 539 aa14.78□□□□□ -0.04
HDAC6-227ENST00000485102 MRPS27Q92552 414 aaKnown RBP14.78□□□□□ -0.04
HDAC6-227ENST00000485102 ZMYND12Q9H0C1 365 aa14.78□□□□□ -0.04
HDAC6-227ENST00000485102 NGRNQ9NPE2 291 aaKnown RBP14.78□□□□□ -0.04
HDAC6-227ENST00000485102 ANO2Q9NQ90 1003 aa14.78□□□□□ -0.04
HDAC6-227ENST00000485102 TMEM260Q9NX78 707 aa14.78□□□□□ -0.04
HDAC6-227ENST00000485102 PUF60Q9UHX1 559 aaKnown RBP14.78□□□□□ -0.04
HDAC6-227ENST00000485102 PCDHGC5Q9Y5F6 944 aa14.78□□□□□ -0.04
HDAC6-227ENST00000485102 PCDHA10Q9Y5I2 948 aa14.78□□□□□ -0.04
HDAC6-227ENST00000485102 PTPRZ1P23471 2315 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-227ENST00000485102 MYO10Q9HD67 2058 aa14.78□□□□□ -0.04
HDAC6-227ENST00000485102 WDR81Q562E7 1941 aa14.77□□□□□ -0.04
HDAC6-227ENST00000485102 PER2O15055 1255 aa14.77□□□□□ -0.05
HDAC6-227ENST00000485102 SRGAP2BP0DMP2 458 aa14.77□□□□□ -0.05
HDAC6-227ENST00000485102 HOXB8P17481 243 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-227ENST00000485102 CIITAP33076 1130 aa14.77□□□□□ -0.05
HDAC6-227ENST00000485102 SETQ01105 290 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-227ENST00000485102 PFKFB3Q16875 520 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-227ENST00000485102 KIZQ2M2Z5 673 aa14.77□□□□□ -0.05
HDAC6-227ENST00000485102 THNSL1Q8IYQ7 743 aa14.77□□□□□ -0.05
HDAC6-227ENST00000485102 LINC01465Q8N7H1 131 aa14.77□□□□□ -0.05
HDAC6-227ENST00000485102 PRSS33Q8NF86 280 aa14.77□□□□□ -0.05
HDAC6-227ENST00000485102 ASIC4Q96FT7 647 aa14.77□□□□□ -0.05
HDAC6-227ENST00000485102 CCDC196A0A1B0GTZ2 297 aa14.76□□□□□ -0.05
HDAC6-227ENST00000485102 DDX39AO00148 427 aaKnown RBP14.76□□□□□ -0.05
HDAC6-227ENST00000485102 EIF4BP23588 611 aaKnown RBP14.76□□□□□ -0.05
HDAC6-227ENST00000485102 CDC27P30260 824 aa14.76□□□□□ -0.05
HDAC6-227ENST00000485102 PPM1AP35813 382 aa14.76□□□□□ -0.05
HDAC6-227ENST00000485102 NUBP1P53384 320 aa14.76□□□□□ -0.05
HDAC6-227ENST00000485102 IER5LQ5T953 404 aa14.76□□□□□ -0.05
HDAC6-227ENST00000485102 ANKRD54Q6NXT1 300 aa14.76□□□□□ -0.05
HDAC6-227ENST00000485102 SYCE2Q6PIF2 218 aa14.76□□□□□ -0.05
HDAC6-227ENST00000485102 SUGP1Q8IWZ8 645 aaKnown RBP14.76□□□□□ -0.05
HDAC6-227ENST00000485102 FAM167AQ96KS9 214 aa14.76□□□□□ -0.05
HDAC6-227ENST00000485102 CASD1Q96PB1 797 aa14.76□□□□□ -0.05
HDAC6-227ENST00000485102 OSMRQ99650 979 aa14.76□□□□□ -0.05
HDAC6-227ENST00000485102 ZNF577Q9BSK1 485 aa14.76□□□□□ -0.05
HDAC6-227ENST00000485102 ADAMTS10Q9H324 1103 aa14.76□□□□□ -0.05
HDAC6-227ENST00000485102 RNF19AQ9NV58 838 aa14.76□□□□□ -0.05
HDAC6-227ENST00000485102 USP34Q70CQ2 3546 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 EOMESO95936 686 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 VTNP04004 478 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 PSAPP07602 524 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 HMGB1P09429 215 aaKnown RBP14.75□□□□□ -0.05
HDAC6-227ENST00000485102 FGFR1P11362 822 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 IRX6P78412 446 aaPredicted RBP14.75□□□□□ -0.05
HDAC6-227ENST00000485102 RBM10P98175 930 aaKnown RBP14.75□□□□□ -0.05
HDAC6-227ENST00000485102 TCF15Q12870 199 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 KRT32Q14532 448 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 BMP2KLQ5H9B9 411 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 JAKMIP3Q5VZ66 844 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 KCNT2Q6UVM3 1135 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 LRRC55Q6ZSA7 311 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 CKAP2LQ8IYA6 745 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 METTL13Q8N6R0 699 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 CCDC12Q8WUD4 166 aaPredicted RBP14.75□□□□□ -0.05
HDAC6-227ENST00000485102 RSPH1Q8WYR4 309 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 CCDC136Q96JN2 1154 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 RPGRIP1Q96KN7 1286 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 IRF2BPLQ9H1B7 796 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 PPP4R2Q9NY27 417 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 HCSTQ9UBK5 93 aa14.75□□□□□ -0.05
HDAC6-227ENST00000485102 RIF1Q5UIP0 2472 aaKnown RBP14.74□□□□□ -0.05
HDAC6-227ENST00000485102 A0A0U1RQF3 1178 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 GOLGA8AA7E2F4 631 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 GOLGA8BA8MQT2 603 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 ZSCAN20P17040 1043 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-227ENST00000485102 TMOD1P28289 359 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 GNA11P29992 359 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 NLRP11P59045 1033 aaKnown RBP14.74□□□□□ -0.05
HDAC6-227ENST00000485102 KRT17Q04695 432 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 PTPN21Q16825 1174 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms