RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 TMEM177Q53S58 311 aa6.79□□□□□ -1.32
SCAF11-207ENST00000484275 WDR48Q8TAF3 677 aa6.79□□□□□ -1.32
SCAF11-207ENST00000484275 CACTINQ8WUQ7 758 aaKnown RBP6.79□□□□□ -1.32
SCAF11-207ENST00000484275 ARMC5Q96C12 935 aa6.79□□□□□ -1.32
SCAF11-207ENST00000484275 C8orf37Q96NL8 207 aa6.79□□□□□ -1.32
SCAF11-207ENST00000484275 CSRNP2Q9H175 543 aa6.79□□□□□ -1.32
SCAF11-207ENST00000484275 TLR9Q9NR96 1032 aa6.79□□□□□ -1.32
SCAF11-207ENST00000484275 FAM184BQ9ULE4 1060 aa6.79□□□□□ -1.32
SCAF11-207ENST00000484275 STAT3P40763 770 aa6.78□□□□□ -1.32
SCAF11-207ENST00000484275 IRF9Q00978 393 aa6.78□□□□□ -1.32
SCAF11-207ENST00000484275 ADAM15Q13444 863 aa6.78□□□□□ -1.32
SCAF11-207ENST00000484275 SAFB2Q14151 953 aaKnown RBP eCLIP6.78□□□□□ -1.32
SCAF11-207ENST00000484275 GRM7Q14831 915 aa6.78□□□□□ -1.32
SCAF11-207ENST00000484275 ACAP1Q15027 740 aa6.78□□□□□ -1.32
SCAF11-207ENST00000484275 LSM12Q3MHD2 195 aaKnown RBP6.78□□□□□ -1.32
SCAF11-207ENST00000484275 CRB2Q5IJ48 1285 aa6.78□□□□□ -1.32
SCAF11-207ENST00000484275 SPTY2D1Q68D10 685 aaPredicted RBP6.78□□□□□ -1.32
SCAF11-207ENST00000484275 ERCC4Q92889 916 aaPredicted RBP6.78□□□□□ -1.32
SCAF11-207ENST00000484275 TMEM176AQ96HP8 235 aa6.78□□□□□ -1.32
SCAF11-207ENST00000484275 SRPK1Q96SB4 655 aaKnown RBP6.78□□□□□ -1.32
SCAF11-207ENST00000484275 MSL2Q9HCI7 577 aa6.78□□□□□ -1.32
SCAF11-207ENST00000484275 SLC26A4O43511 780 aa6.77□□□□□ -1.33
SCAF11-207ENST00000484275 MAFO75444 373 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-207ENST00000484275 HIBADHP31937 336 aaKnown RBP6.77□□□□□ -1.33
SCAF11-207ENST00000484275 MECP2P51608 486 aaKnown RBP6.77□□□□□ -1.33
SCAF11-207ENST00000484275 ALDH6A1Q02252 535 aaKnown RBP6.77□□□□□ -1.33
SCAF11-207ENST00000484275 FNDC7Q5VTL7 733 aa6.77□□□□□ -1.33
SCAF11-207ENST00000484275 OTOP1Q7RTM1 612 aa6.77□□□□□ -1.33
SCAF11-207ENST00000484275 C2orf69Q8N8R5 385 aa6.77□□□□□ -1.33
SCAF11-207ENST00000484275 SHCBP1Q8NEM2 672 aa6.77□□□□□ -1.33
SCAF11-207ENST00000484275 PLEKHG4BQ96PX9 1271 aa6.77□□□□□ -1.33
SCAF11-207ENST00000484275 MRPL4Q9BYD3 311 aaKnown RBP6.77□□□□□ -1.33
SCAF11-207ENST00000484275 NELFAQ9H3P2 528 aa6.77□□□□□ -1.33
SCAF11-207ENST00000484275 MAGEL2Q9UJ55 1249 aa6.77□□□□□ -1.33
SCAF11-207ENST00000484275 CTDP1Q9Y5B0 961 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-207ENST00000484275 PTCH2Q9Y6C5 1203 aa6.77□□□□□ -1.33
SCAF11-207ENST00000484275 DVL2O14641 736 aa6.76□□□□□ -1.33
SCAF11-207ENST00000484275 APEX1P27695 318 aaKnown RBP6.76□□□□□ -1.33
SCAF11-207ENST00000484275 ABHD18Q0P651 414 aa6.76□□□□□ -1.33
SCAF11-207ENST00000484275 RIN1Q13671 783 aa6.76□□□□□ -1.33
SCAF11-207ENST00000484275 LILRB2Q8N423 598 aa6.76□□□□□ -1.33
SCAF11-207ENST00000484275 ZSWIM2Q8NEG5 633 aa6.76□□□□□ -1.33
SCAF11-207ENST00000484275 THAP3Q8WTV1 239 aaPredicted RBP6.76□□□□□ -1.33
SCAF11-207ENST00000484275 PMS2P1A4D2B8 440 aa6.75□□□□□ -1.33
SCAF11-207ENST00000484275 HIP1RO75146 1068 aa6.75□□□□□ -1.33
SCAF11-207ENST00000484275 CC2D1AQ6P1N0 951 aaPredicted RBP6.75□□□□□ -1.33
SCAF11-207ENST00000484275 CALML6Q8TD86 181 aa6.75□□□□□ -1.33
SCAF11-207ENST00000484275 MKL1Q969V6 931 aa6.75□□□□□ -1.33
SCAF11-207ENST00000484275 FOXB1Q99853 325 aa6.75□□□□□ -1.33
SCAF11-207ENST00000484275 NCOA5Q9HCD5 579 aaKnown RBP6.75□□□□□ -1.33
SCAF11-207ENST00000484275 CEP72Q9P209 647 aa6.75□□□□□ -1.33
SCAF11-207ENST00000484275 NPTXRO95502 500 aa6.74□□□□□ -1.33
SCAF11-207ENST00000484275 RGS3P49796 1198 aa6.74□□□□□ -1.33
SCAF11-207ENST00000484275 ANTXR2P58335 489 aa6.74□□□□□ -1.33
SCAF11-207ENST00000484275 ATP2C1P98194 919 aaPredicted RBP6.74□□□□□ -1.33
SCAF11-207ENST00000484275 C2orf27AQ580R0 203 aa6.74□□□□□ -1.33
SCAF11-207ENST00000484275 SGMS1Q86VZ5 419 aa6.74□□□□□ -1.33
SCAF11-207ENST00000484275 D2HGDHQ8N465 521 aa6.74□□□□□ -1.33
SCAF11-207ENST00000484275 CLUHP3Q96NS8 147 aa6.74□□□□□ -1.33
SCAF11-207ENST00000484275 BOCQ9BWV1 1114 aa6.74□□□□□ -1.33
SCAF11-207ENST00000484275 SH3BP1Q9Y3L3 701 aa6.74□□□□□ -1.33
SCAF11-207ENST00000484275 CCDC163A0A0D9SF12 145 aa6.73□□□□□ -1.33
SCAF11-207ENST00000484275 C2orf78A6NCI8 922 aa6.73□□□□□ -1.33
SCAF11-207ENST00000484275 M0R2C6 588 aa6.73□□□□□ -1.33
SCAF11-207ENST00000484275 KRT37O76014 449 aa6.73□□□□□ -1.33
SCAF11-207ENST00000484275 RAPGEF3O95398 923 aa6.73□□□□□ -1.33
SCAF11-207ENST00000484275 PRLP01236 227 aa6.73□□□□□ -1.33
SCAF11-207ENST00000484275 ADCY7P51828 1080 aa6.73□□□□□ -1.33
SCAF11-207ENST00000484275 ADAM8P78325 824 aa6.73□□□□□ -1.33
SCAF11-207ENST00000484275 ADGRE4PQ86SQ3 457 aa6.73□□□□□ -1.33
SCAF11-207ENST00000484275 CHFRQ96EP1 664 aa6.73□□□□□ -1.33
SCAF11-207ENST00000484275 ZNF703Q9H7S9 590 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-207ENST00000484275 VWA7Q9Y334 891 aa6.73□□□□□ -1.33
SCAF11-207ENST00000484275 CAPN14A8MX76 684 aa6.72□□□□□ -1.33
SCAF11-207ENST00000484275 GLRX3O76003 335 aaKnown RBP6.72□□□□□ -1.33
SCAF11-207ENST00000484275 TGFB2P61812 414 aa6.72□□□□□ -1.33
SCAF11-207ENST00000484275 MAP3K12Q12852 859 aa6.72□□□□□ -1.33
SCAF11-207ENST00000484275 AMER2Q8N7J2 671 aa6.72□□□□□ -1.33
SCAF11-207ENST00000484275 PMFBP1Q8TBY8 1022 aa6.72□□□□□ -1.33
SCAF11-207ENST00000484275 RABGGTAQ92696 567 aa6.72□□□□□ -1.33
SCAF11-207ENST00000484275 GPHA2Q96T91 129 aa6.72□□□□□ -1.33
SCAF11-207ENST00000484275 TRIM8Q9BZR9 551 aa6.72□□□□□ -1.33
SCAF11-207ENST00000484275 IKZF4Q9H2S9 585 aa6.72□□□□□ -1.33
SCAF11-207ENST00000484275 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.34
SCAF11-207ENST00000484275 APPP05067 770 aa6.71□□□□□ -1.34
SCAF11-207ENST00000484275 MCM7P33993 719 aa6.71□□□□□ -1.34
SCAF11-207ENST00000484275 FNTBP49356 437 aa6.71□□□□□ -1.34
SCAF11-207ENST00000484275 KIF11P52732 1056 aa6.71□□□□□ -1.34
SCAF11-207ENST00000484275 SLC6A3Q01959 620 aa6.71□□□□□ -1.34
SCAF11-207ENST00000484275 TUBA3CQ13748 450 aa6.71□□□□□ -1.34
SCAF11-207ENST00000484275 TUBA3EQ6PEY2 450 aa6.71□□□□□ -1.34
SCAF11-207ENST00000484275 KLHDC10Q6PID8 442 aa6.71□□□□□ -1.34
SCAF11-207ENST00000484275 OR5AN1Q8NGI8 311 aa6.71□□□□□ -1.34
SCAF11-207ENST00000484275 MMRN2Q9H8L6 949 aa6.71□□□□□ -1.34
SCAF11-207ENST00000484275 SAMD15Q9P1V8 674 aa6.71□□□□□ -1.34
SCAF11-207ENST00000484275 GIT1Q9Y2X7 761 aa6.71□□□□□ -1.34
SCAF11-207ENST00000484275 A0A1W2PRX2 142 aa6.7□□□□□ -1.34
SCAF11-207ENST00000484275 TRAF5O00463 557 aa6.7□□□□□ -1.34
SCAF11-207ENST00000484275 PLD2O14939 933 aa6.7□□□□□ -1.34
SCAF11-207ENST00000484275 HHEXQ03014 270 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 231.8 ms