RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 SPC25Q9HBM1 224 aa15.5■□□□□ 0.07
SMAD9-204ENST00000483941 SEL1LQ9UBV2 794 aa15.5■□□□□ 0.07
SMAD9-204ENST00000483941 ZNF215Q9UL58 517 aaPredicted RBP15.5■□□□□ 0.07
SMAD9-204ENST00000483941 KIAA1217Q5T5P2 1943 aa15.5■□□□□ 0.07
SMAD9-204ENST00000483941 BECN2A8MW95 431 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 BIN1O00499 593 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 KPNA6O60684 536 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 DGAT1O75907 488 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 OATP04181 439 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 SMPD1P17405 629 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 ERCC5P28715 1186 aaPredicted RBP15.49■□□□□ 0.07
SMAD9-204ENST00000483941 CYP2C19P33261 490 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 ABCD1P33897 745 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 MRE11P49959 708 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 CPT1AP50416 773 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 RTP1P59025 263 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 PRKCEQ02156 737 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 UVSSAQ2YD98 709 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 KMT5BQ4FZB7 885 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 XKR9Q5GH70 373 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 PADI6Q6TGC4 694 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 STXBP4Q6ZWJ1 553 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 DYMQ7RTS9 669 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 CCDC60Q8IWA6 550 aaPredicted RBP15.49■□□□□ 0.07
SMAD9-204ENST00000483941 MCPH1Q8NEM0 835 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 ERCC4Q92889 916 aaPredicted RBP15.49■□□□□ 0.07
SMAD9-204ENST00000483941 DRC1Q96MC2 740 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 NIFKQ9BYG3 293 aaKnown RBP15.49■□□□□ 0.07
SMAD9-204ENST00000483941 PANK4Q9NVE7 773 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 ERAP1Q9NZ08 941 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 FLRT1Q9NZU1 646 aa15.49■□□□□ 0.07
SMAD9-204ENST00000483941 GOLGA6L19H0YKK7 550 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 DNM1LO00429 736 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 ZEB2O60315 1214 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 MSCO60682 206 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 FAM13AO94988 1023 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 SCP2P22307 547 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 RFC5P40937 340 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 HSDL1Q3SXM5 330 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 COBLL1Q53SF7 1204 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 C1orf186Q6ZWK4 172 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 LRRC15Q8TF66 581 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 MYLIPQ8WY64 445 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 ANP32BQ92688 251 aaKnown RBP15.48■□□□□ 0.07
SMAD9-204ENST00000483941 CEP170P1Q96L14 293 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 DNAJC25Q9H1X3 360 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 SEMA6BQ9H3T3 888 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 C17orf75Q9HAS0 396 aa15.48■□□□□ 0.07
SMAD9-204ENST00000483941 LARSQ9P2J5 1176 aaKnown RBP15.48■□□□□ 0.07
SMAD9-204ENST00000483941 DDX20Q9UHI6 824 aaKnown RBP15.48■□□□□ 0.07
SMAD9-204ENST00000483941 FRMD3A2A2Y4 597 aa15.47■□□□□ 0.07
SMAD9-204ENST00000483941 LRRC37A2A6NM11 1700 aa15.47■□□□□ 0.07
SMAD9-204ENST00000483941 PSMA7O14818 248 aa15.47■□□□□ 0.07
SMAD9-204ENST00000483941 GAS2O43903 313 aaKnown RBP15.47■□□□□ 0.07
SMAD9-204ENST00000483941 HBP1O60381 514 aa15.47■□□□□ 0.07
SMAD9-204ENST00000483941 DUSP11O75319 330 aaKnown RBP15.47■□□□□ 0.07
SMAD9-204ENST00000483941 GIT2Q14161 759 aa15.47■□□□□ 0.07
SMAD9-204ENST00000483941 HERC4Q5GLZ8 1057 aaPredicted RBP15.47■□□□□ 0.07
SMAD9-204ENST00000483941 ATP8B4Q8TF62 1192 aa15.47■□□□□ 0.07
SMAD9-204ENST00000483941 AFG1LQ8WV93 481 aa15.47■□□□□ 0.07
SMAD9-204ENST00000483941 KIFAP3Q92845 792 aa15.47■□□□□ 0.07
SMAD9-204ENST00000483941 DNAJC19Q96DA6 116 aa15.47■□□□□ 0.07
SMAD9-204ENST00000483941 BCAS3Q9H6U6 928 aa15.47■□□□□ 0.07
SMAD9-204ENST00000483941 PARVGQ9HBI0 331 aa15.47■□□□□ 0.07
SMAD9-204ENST00000483941 CYP26B1Q9NR63 512 aa15.47■□□□□ 0.07
SMAD9-204ENST00000483941 WRAP73Q9P2S5 460 aaPredicted RBP15.47■□□□□ 0.07
SMAD9-204ENST00000483941 SEPT9Q9UHD8 586 aaPredicted RBP15.47■□□□□ 0.07
SMAD9-204ENST00000483941 GNEQ9Y223 722 aaKnown RBP15.47■□□□□ 0.07
SMAD9-204ENST00000483941 ATP11BQ9Y2G3 1177 aa15.47■□□□□ 0.07
SMAD9-204ENST00000483941 BICDL2A1A5D9 508 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 FSD2A1L4K1 749 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 A6NJR5 290 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 SEPT4O43236 478 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 DYNC1LI2O43237 492 aaPredicted RBP15.46■□□□□ 0.07
SMAD9-204ENST00000483941 KLRC4O43908 158 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 SORBS3O60504 671 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 RARBP10826 455 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 HOXD8P13378 290 aaPredicted RBP15.46■□□□□ 0.07
SMAD9-204ENST00000483941 FOSL2P15408 326 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 CNGA1P29973 690 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 SHHQ15465 462 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 UGCGQ16739 394 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 DPCR1Q3MIW9 517 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 ARSHQ5FYA8 562 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 FAM26FQ5R3K3 315 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 PRAMEF19Q5SWL8 479 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 C9orf50Q5SZB4 431 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 UTP14CQ5TAP6 766 aaKnown RBP15.46■□□□□ 0.07
SMAD9-204ENST00000483941 ANO5Q75V66 913 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 TLK2Q86UE8 772 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 SLC7A3Q8WY07 619 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 COPS5Q92905 334 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 DHTKD1Q96HY7 919 aaPredicted RBP15.46■□□□□ 0.07
SMAD9-204ENST00000483941 REEP2Q9BRK0 252 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 KATNAL1Q9BW62 490 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 ZHX3Q9H4I2 956 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 ATP6V0A4Q9HBG4 840 aa15.46■□□□□ 0.07
SMAD9-204ENST00000483941 LOXHD1Q8IVV2 1947 aa15.45■□□□□ 0.06
SMAD9-204ENST00000483941 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.45■□□□□ 0.06
SMAD9-204ENST00000483941 H0YCG3 227 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms