RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 TRAF6Q9Y4K3 522 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 DGKBQ9Y6T7 804 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 A0A1W2PQ27 194 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 A0A1W2PQ64 194 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 A0A1W2PQC6 194 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 A0A1W2PQD8 194 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 KLHL33A6NCF5 533 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 TRIM75PA6NK02 468 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 XPOTO43592 962 aaKnown RBP5.41□□□□□ -1.54
PTCD3-214ENST00000483925 OFD1O75665 1012 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 GSNP06396 782 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 ZKSCAN1P17029 563 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-214ENST00000483925 KCNA6P17658 529 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 PFKLP17858 780 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 MAPKAPK2P49137 400 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 DDX10Q13206 875 aaKnown RBP5.41□□□□□ -1.54
PTCD3-214ENST00000483925 GALEQ14376 348 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 ELF2Q15723 593 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 PRR16Q569H4 304 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 RRP12Q5JTH9 1297 aaKnown RBP5.41□□□□□ -1.54
PTCD3-214ENST00000483925 JAKMIP3Q5VZ66 844 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 GTF2IRD2BQ6EKJ0 949 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 TTLL5Q6EMB2 1281 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 ZC3H14Q6PJT7 736 aaKnown RBP5.41□□□□□ -1.54
PTCD3-214ENST00000483925 CRTC3Q6UUV7 619 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 USP53Q70EK8 1073 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 FRMD5Q7Z6J6 570 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 GTF2IRD2Q86UP8 949 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 C7orf61Q8IZ16 206 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 NKAPQ8N5F7 415 aaKnown RBP5.41□□□□□ -1.54
PTCD3-214ENST00000483925 IGSF22Q8N9C0 903 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 SPATA5Q8NB90 893 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 TMEM52Q8NDY8 209 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 POF1BQ8WVV4 589 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 CCT6BQ92526 530 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 TBATAQ96M53 351 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 ZFYVE21Q9BQ24 234 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 NKX2-4Q9H2Z4 354 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 GP6Q9HCN6 339 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 C14orf119Q9NWQ9 140 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 B4GALT6Q9UBX8 382 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 INVSQ9Y283 1065 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 DIS3Q9Y2L1 958 aaKnown RBP5.41□□□□□ -1.54
PTCD3-214ENST00000483925 IRS2Q9Y4H2 1338 aa5.41□□□□□ -1.54
PTCD3-214ENST00000483925 hCG_1642624A0A1W2PR95 340 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 AP1G1O43747 822 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 RNASEH2AO75792 299 aaKnown RBP5.4□□□□□ -1.54
PTCD3-214ENST00000483925 ZBED1O96006 694 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 HRGP04196 525 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 SCG5P05408 212 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 ADRB1P08588 477 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 SRGNP10124 158 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 MCCP23508 829 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 ALDH5A1P51649 535 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-214ENST00000483925 USP14P54578 494 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 CAP1Q01518 475 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 TBX2Q13207 712 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-214ENST00000483925 ODF1Q14990 250 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 LONRF1Q17RB8 773 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 NOL9Q5SY16 702 aaKnown RBP5.4□□□□□ -1.54
PTCD3-214ENST00000483925 SLC35F1Q5T1Q4 408 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 HLA-DQA1Q5Y7H0 255 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 ICE2Q659A1 982 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 XRRA1Q6P2D8 792 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 B3GNT9Q6UX72 402 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 RSPO2Q6UXX9 243 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-214ENST00000483925 SAPCD2Q86UD0 394 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 ZC3H7AQ8IWR0 971 aaKnown RBP5.4□□□□□ -1.54
PTCD3-214ENST00000483925 NAT16Q8N8M0 369 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 TP53I13Q8NBR0 393 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-214ENST00000483925 TMEM145Q8NBT3 493 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 CHST14Q8NCH0 376 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 ADCY4Q8NFM4 1077 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 CHTF18Q8WVB6 975 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 SLC5A5Q92911 643 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 PGBD4Q96DM1 585 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 BORCS6Q96GS4 357 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 FAM193BQ96PV7 902 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-214ENST00000483925 DSCC1Q9BVC3 393 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 ADAM7Q9H2U9 754 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 SLC12A5Q9H2X9 1139 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 VTA1Q9NP79 307 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 SPTLC3Q9NUV7 552 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 CGGBP1Q9UFW8 167 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-214ENST00000483925 RABGAP1Q9Y3P9 1069 aa5.4□□□□□ -1.54
PTCD3-214ENST00000483925 TRAF5O00463 557 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 EPB41L2O43491 1005 aaKnown RBP5.39□□□□□ -1.55
PTCD3-214ENST00000483925 HSD3B1P14060 373 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 IGFBP6P24592 240 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-214ENST00000483925 GTF2A2P52657 109 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 MVKQ03426 396 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 LRRC32Q14392 662 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 TARBP2Q15633 366 aaKnown RBP5.39□□□□□ -1.55
PTCD3-214ENST00000483925 SF1Q15637 639 aaKnown RBP5.39□□□□□ -1.55
PTCD3-214ENST00000483925 DDB1Q16531 1140 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 PLEKHN1Q494U1 663 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-214ENST00000483925 RTP2Q5QGT7 225 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 CWF19L1Q69YN2 538 aaKnown RBP5.39□□□□□ -1.55
PTCD3-214ENST00000483925 MZT2AQ6P582 158 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 ABHD17CQ6PCB6 329 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms