RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 MCM9Q9NXL9 1143 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 PSMC3P17980 439 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 TNNI1P19237 187 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 PHF21AQ96BD5 680 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 TTC21BQ7Z4L5 1316 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 E4F1Q66K89 784 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-207ENST00000483888 PLEKHM3Q6ZWE6 761 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 FHDC1Q9C0D6 1143 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-207ENST00000483888 AGTP01019 485 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 NDUFA5Q16718 116 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 TBC1D9BQ66K14 1250 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 PPM1KQ8N3J5 372 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 WWP1Q9H0M0 922 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 IQSEC3Q9UPP2 1182 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-207ENST00000483888 POLR3AO14802 1390 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-207ENST00000483888 GOLGA8RI6L899 631 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 MRPL12P52815 198 aaKnown RBP10.92□□□□□ -0.66
COL12A1-207ENST00000483888 RUNX1T1Q06455 604 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 INPP5AQ14642 412 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 BBS9Q3SYG4 887 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 KRT25Q7Z3Z0 450 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 NME9Q86XW9 330 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 MB21D1Q8N884 522 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 ITFG2Q969R8 447 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 DEPDC7Q96QD5 511 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 KLHL4Q9C0H6 718 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 SYTL2Q9HCH5 934 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 NSMCE4AQ9NXX6 385 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 PNMA2Q9UL42 364 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 ADGRG1Q9Y653 693 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 HNRNPRO43390 633 aaKnown RBP10.92□□□□□ -0.66
COL12A1-207ENST00000483888 GAS7O60861 476 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 TMEM63BQ5T3F8 832 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 ATAD3BQ5T9A4 648 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 PDIK1LQ8N165 341 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 INPP5DQ92835 1189 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 MTBPQ96DY7 904 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 CDHR2Q9BYE9 1310 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 MYL7Q01449 175 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 ZIM3Q96PE6 472 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 THAP9Q9H5L6 903 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 GPAA1O43292 621 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 NCK2O43639 380 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 KRT16P08779 473 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 FCHO2Q0JRZ9 810 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 PTGDRQ13258 359 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 ZNF786Q8N393 782 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 GLMNQ92990 594 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 LRRN2O75325 713 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 H2AFXP16104 143 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-207ENST00000483888 CCNI2Q6ZMN8 369 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-207ENST00000483888 FRA10AC1Q70Z53 315 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 TNIP2Q8NFZ5 429 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 HNRNPLLQ8WVV9 542 aaKnown RBP10.92□□□□□ -0.66
COL12A1-207ENST00000483888 P2RX5Q93086 422 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 ATP6V1E2Q96A05 226 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 TSSK1BQ9BXA7 367 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 SLC13A1Q9BZW2 595 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 MBD2Q9UBB5 411 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 C1orf232A0A0U1RR37 186 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 FMNL1O95466 1100 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-207ENST00000483888 YWHAHQ04917 246 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-207ENST00000483888 LMBR1LQ6UX01 489 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 ZNF554Q86TJ5 538 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 SLC38A10Q9HBR0 1119 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 METTL14Q9HCE5 456 aaKnown RBP10.92□□□□□ -0.66
COL12A1-207ENST00000483888 GCNT4Q9P109 453 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 NOC2LQ9Y3T9 749 aaKnown RBP10.92□□□□□ -0.66
COL12A1-207ENST00000483888 GFPT2O94808 682 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 CCT3P49368 545 aaKnown RBP10.92□□□□□ -0.66
COL12A1-207ENST00000483888 AKR1D1P51857 326 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 PDAP1Q13442 181 aaKnown RBP10.92□□□□□ -0.66
COL12A1-207ENST00000483888 PODNQ7Z5L7 613 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 JPH4Q96JJ6 628 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 PKD2L1Q9P0L9 805 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 SUN2Q9UH99 717 aa10.92□□□□□ -0.66
COL12A1-207ENST00000483888 CDV3Q9UKY7 258 aaKnown RBP10.92□□□□□ -0.66
COL12A1-207ENST00000483888 DARS2Q6PI48 645 aaKnown RBP10.91□□□□□ -0.66
COL12A1-207ENST00000483888 KSR2Q6VAB6 950 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 CLEC4FQ8N1N0 589 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 MRPL1Q9BYD6 325 aaKnown RBP10.91□□□□□ -0.66
COL12A1-207ENST00000483888 DCDC2Q9UHG0 476 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 MBD4O95243 580 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 OTUD4Q01804 1114 aaKnown RBP10.91□□□□□ -0.66
COL12A1-207ENST00000483888 NLRP9Q7RTR0 991 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 EZH1Q92800 747 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-207ENST00000483888 NSL1Q96IY1 281 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 FUT8Q9BYC5 575 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 C1orf112Q9NSG2 853 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 MAGED2Q9UNF1 606 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-207ENST00000483888 GSNP06396 782 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 HSPD1P10809 573 aaKnown RBP10.91□□□□□ -0.66
COL12A1-207ENST00000483888 KDM7AQ6ZMT4 941 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 LRCH1Q9Y2L9 728 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 GUCY1B2O75343 617 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 CCZ1BP86790 482 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 CCZ1P86791 482 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-207ENST00000483888 OR8H2Q8N162 312 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 RCOR1Q9UKL0 485 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 DTNAQ9Y4J8 743 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms