RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 LTBRP36941 435 aa13.66□□□□□ -0.22
FAM3D-202ENST00000482623 CAMK1Q14012 370 aa13.66□□□□□ -0.22
FAM3D-202ENST00000482623 TOB2Q14106 344 aaPredicted RBP13.66□□□□□ -0.22
FAM3D-202ENST00000482623 DSC3Q14574 896 aa13.66□□□□□ -0.22
FAM3D-202ENST00000482623 SMAD2Q15796 467 aaKnown RBP13.66□□□□□ -0.22
FAM3D-202ENST00000482623 ZBTB10Q96DT7 871 aa13.66□□□□□ -0.22
FAM3D-202ENST00000482623 POP1Q99575 1024 aaKnown RBP13.66□□□□□ -0.22
FAM3D-202ENST00000482623 CDCA3Q99618 268 aaPredicted RBP13.66□□□□□ -0.22
FAM3D-202ENST00000482623 ATP6V0A4Q9HBG4 840 aa13.66□□□□□ -0.22
FAM3D-202ENST00000482623 CHST12Q9NRB3 414 aa13.66□□□□□ -0.22
FAM3D-202ENST00000482623 LZTS1Q9Y250 596 aa13.66□□□□□ -0.22
FAM3D-202ENST00000482623 SAMM50Q9Y512 469 aa13.66□□□□□ -0.22
FAM3D-202ENST00000482623 PPME1Q9Y570 386 aa13.66□□□□□ -0.22
FAM3D-202ENST00000482623 EDIL3O43854 480 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 DKC1O60832 514 aaKnown RBP eCLIP13.65□□□□□ -0.22
FAM3D-202ENST00000482623 PSMD10O75832 226 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 EYA4O95677 639 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 EOMESO95936 686 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 OATP04181 439 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 ITGB1P05556 798 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 ZSCAN20P17040 1043 aaPredicted RBP13.65□□□□□ -0.22
FAM3D-202ENST00000482623 XBP1P17861 261 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 HYAL1Q12794 435 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 TARBP2Q15633 366 aaKnown RBP13.65□□□□□ -0.22
FAM3D-202ENST00000482623 XKR3Q5GH77 459 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 ERICH6BQ5W0A0 696 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 EFCAB12Q6NXP0 572 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 B3GNT9Q6UX72 402 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 ADHFE1Q8IWW8 467 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 BLIDQ8IZY5 108 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 METTL13Q8N6R0 699 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 EFHBQ8N7U6 833 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 KLHL23Q8NBE8 558 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 TBCKQ8TEA7 893 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 NAP1L4Q99733 375 aaKnown RBP13.65□□□□□ -0.22
FAM3D-202ENST00000482623 JPH2Q9BR39 696 aaPredicted RBP13.65□□□□□ -0.22
FAM3D-202ENST00000482623 LRFN3Q9BTN0 628 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 TRAIPQ9BWF2 469 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 TEKT3Q9BXF9 490 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 ADAMTS10Q9H324 1103 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 EPHX3Q9H6B9 360 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 CDHR5Q9HBB8 845 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 CLDND1Q9NY35 253 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 VPS54Q9P1Q0 977 aa13.65□□□□□ -0.22
FAM3D-202ENST00000482623 DOCK5Q9H7D0 1870 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 PRR33A8MZF0 331 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 DNM2P50570 870 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 ANAPC15P60006 121 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 CCT2P78371 535 aaKnown RBP13.64□□□□□ -0.23
FAM3D-202ENST00000482623 PLCB3Q01970 1234 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 SMAD4Q13485 552 aaKnown RBP13.64□□□□□ -0.23
FAM3D-202ENST00000482623 KIZQ2M2Z5 673 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 LRCH2Q5VUJ6 765 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 PPP4R3AQ6IN85 833 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 KRT25Q7Z3Z0 450 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 FAM228AQ86W67 206 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 TMEM40Q8WWA1 233 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 FAM20AQ96MK3 541 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 INO80BQ9C086 356 aaPredicted RBP13.64□□□□□ -0.23
FAM3D-202ENST00000482623 TMEM117Q9H0C3 514 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 ALG13Q9NP73 1137 aaKnown RBP13.64□□□□□ -0.23
FAM3D-202ENST00000482623 CD320Q9NPF0 282 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 PUF60Q9UHX1 559 aaKnown RBP13.64□□□□□ -0.23
FAM3D-202ENST00000482623 GINS2Q9Y248 185 aa13.64□□□□□ -0.23
FAM3D-202ENST00000482623 COL4A4P53420 1690 aaPredicted RBP13.63□□□□□ -0.23
FAM3D-202ENST00000482623 IGKV6-21A0A0C4DH24 114 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 A0A0U1RQF3 1178 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 H3BQ06 376 aaPredicted RBP13.63□□□□□ -0.23
FAM3D-202ENST00000482623 ADAMTS3O15072 1205 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 TBX3O15119 743 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 ZNF862O60290 1169 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 MGEA5O60502 916 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 SKIP12755 728 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 IL9P15248 144 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 GCFC2P16383 781 aaKnown RBP13.63□□□□□ -0.23
FAM3D-202ENST00000482623 LAG3P18627 525 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 NLRP11P59045 1033 aaKnown RBP13.63□□□□□ -0.23
FAM3D-202ENST00000482623 TBC1D8BQ0IIM8 1120 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 COASYQ13057 564 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 ANKRD1Q15327 319 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 TMEM266Q2M3C6 531 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 POF1BQ8WVV4 589 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 OSMRQ99650 979 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 NCOA5Q9HCD5 579 aaKnown RBP13.63□□□□□ -0.23
FAM3D-202ENST00000482623 PDRG1Q9NUG6 133 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 DACT1Q9NYF0 836 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 AKT3Q9Y243 479 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 RALGAPA2Q2PPJ7 1873 aa13.63□□□□□ -0.23
FAM3D-202ENST00000482623 TCF20Q9UGU0 1960 aaKnown RBP13.62□□□□□ -0.23
FAM3D-202ENST00000482623 VTNP04004 478 aa13.62□□□□□ -0.23
FAM3D-202ENST00000482623 DARSP14868 501 aaKnown RBP13.62□□□□□ -0.23
FAM3D-202ENST00000482623 SSTR3P32745 418 aaPredicted RBP13.62□□□□□ -0.23
FAM3D-202ENST00000482623 PPM1AP35813 382 aa13.62□□□□□ -0.23
FAM3D-202ENST00000482623 PRKCEQ02156 737 aa13.62□□□□□ -0.23
FAM3D-202ENST00000482623 ZP2Q05996 745 aa13.62□□□□□ -0.23
FAM3D-202ENST00000482623 NONOQ15233 471 aaKnown RBP eCLIP13.62□□□□□ -0.23
FAM3D-202ENST00000482623 TMEM184AQ6ZMB5 413 aa13.62□□□□□ -0.23
FAM3D-202ENST00000482623 MIER3Q7Z3K6 550 aa13.62□□□□□ -0.23
FAM3D-202ENST00000482623 ZNF410Q86VK4 478 aa13.62□□□□□ -0.23
FAM3D-202ENST00000482623 RASGRP4Q8TDF6 673 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms