RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 KDM3AQ9Y4C1 1321 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 ZFHX2Q9C0A1 2572 aaPredicted RBP8.03□□□□□ -1.12
COL17A1-205ENST00000480127 ZDBF2Q9HCK1 2354 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 FSD2A1L4K1 749 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 DENND3A2RUS2 1198 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 GALR2O43603 387 aaPredicted RBP8.03□□□□□ -1.12
COL17A1-205ENST00000480127 TECP42680 631 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 ACTR2P61160 394 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 FOXK2Q01167 660 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 PLCB4Q15147 1175 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 ODR4Q5SWX8 454 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 FAM102BQ5T8I3 360 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 PDE12Q6L8Q7 609 aaKnown RBP8.03□□□□□ -1.12
COL17A1-205ENST00000480127 NME8Q8N427 588 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 COLGALT1Q8NBJ5 622 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 RASGRP4Q8TDF6 673 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 PPP1R16BQ96T49 567 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 APOL5Q9BWW9 433 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 SLC26A6Q9BXS9 759 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 CWH43Q9H720 699 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 CDHR5Q9HBB8 845 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 ERVK-5Q9HDB9 667 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 AAASQ9NRG9 546 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 RGS18Q9NS28 235 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 TYW1Q9NV66 732 aaKnown RBP8.03□□□□□ -1.12
COL17A1-205ENST00000480127 RNF216Q9NWF9 866 aaPredicted RBP8.03□□□□□ -1.12
COL17A1-205ENST00000480127 TMEM260Q9NX78 707 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 BARHL2Q9NY43 387 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 PCDHB7Q9Y5E2 793 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 USP34Q70CQ2 3546 aa8.03□□□□□ -1.12
COL17A1-205ENST00000480127 SMIM35A0A1B0GVV1 85 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 PRR23AA6NEV1 266 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 TBKBP1A7MCY6 615 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 C9IYK1 514 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 IPO5O00410 1097 aaKnown RBP8.02□□□□□ -1.13
COL17A1-205ENST00000480127 CHMP2AO43633 222 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 CPA1P15085 419 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 SP100P23497 879 aaPredicted RBP8.02□□□□□ -1.13
COL17A1-205ENST00000480127 CA8P35219 290 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 NBL1P41271 181 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 NLRP5P59047 1200 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 SETQ01105 290 aaPredicted RBP8.02□□□□□ -1.13
COL17A1-205ENST00000480127 KRT76Q01546 638 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 PLCB3Q01970 1234 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 ADCK5Q3MIX3 580 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 PRR16Q569H4 304 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 MTHFD1LQ6UB35 978 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 PLPPR4Q7Z2D5 763 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 THNSL1Q8IYQ7 743 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 TMEM105Q8N8V8 129 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 TMEM87AQ8NBN3 555 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 KREMEN2Q8NCW0 462 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 TMEM40Q8WWA1 233 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 MAP7D2Q96T17 732 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 ADAM2Q99965 735 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 SLKQ9H2G2 1235 aaPredicted RBP8.02□□□□□ -1.13
COL17A1-205ENST00000480127 ZNF302Q9NR11 478 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 CDH22Q9UJ99 828 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 BRPF3Q9ULD4 1205 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 AKT3Q9Y243 479 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 LZTS1Q9Y250 596 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 NOC2LQ9Y3T9 749 aaKnown RBP8.02□□□□□ -1.13
COL17A1-205ENST00000480127 CYP46A1Q9Y6A2 500 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 CACNA1HO95180 2353 aa8.02□□□□□ -1.13
COL17A1-205ENST00000480127 HIDE1A8MVS5 230 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 GAS7O60861 476 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 BRD1O95696 1058 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 PSAPP07602 524 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 FGFR1P11362 822 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 HOXB8P17481 243 aaPredicted RBP8.01□□□□□ -1.13
COL17A1-205ENST00000480127 XBP1P17861 261 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 KLRC1P26715 233 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 TMOD1P28289 359 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 ADD1P35611 737 aaKnown RBP8.01□□□□□ -1.13
COL17A1-205ENST00000480127 SLC26A2P50443 739 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 CCT2P78371 535 aaKnown RBP8.01□□□□□ -1.13
COL17A1-205ENST00000480127 FAM189BP81408 668 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 SSRP1Q08945 709 aaKnown RBP8.01□□□□□ -1.13
COL17A1-205ENST00000480127 STK3Q13188 491 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 PFKFB3Q16875 520 aaPredicted RBP8.01□□□□□ -1.13
COL17A1-205ENST00000480127 PLPP4Q5VZY2 271 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 SWSAP1Q6NVH7 229 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 LLGL2Q6P1M3 1020 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 LRRC55Q6ZSA7 311 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 FAM43BQ6ZT52 329 aaPredicted RBP8.01□□□□□ -1.13
COL17A1-205ENST00000480127 SLC24A5Q71RS6 500 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 ZBTB33Q86T24 672 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 TEX2Q8IWB9 1127 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 RASEFQ8IZ41 740 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 KIAA0319LQ8IZA0 1049 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 ABI1Q8IZP0 508 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 RNF169Q8NCN4 708 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 CYP2W1Q8TAV3 490 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 MRPS27Q92552 414 aaKnown RBP8.01□□□□□ -1.13
COL17A1-205ENST00000480127 PHKBQ93100 1093 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 TCF25Q9BQ70 676 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 SMOC2Q9H3U7 446 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 AGO4Q9HCK5 861 aaKnown RBP8.01□□□□□ -1.13
COL17A1-205ENST00000480127 C1orf112Q9NSG2 853 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 TBC1D22BQ9NU19 505 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms