RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SPDYCQ5MJ68 293 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 YTHDF3Q7Z739 585 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 TRIM59Q8IWR1 403 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 NEDD1Q8NHV4 660 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 SPDL1Q96EA4 605 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ZBTB18Q99592 522 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 TRIM62Q9BVG3 475 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 ZCCHC17Q9NP64 241 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 DNAJC12Q9UKB3 198 aa6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 PRDM15P57071 1507 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-205ENST00000480058 PALLDQ8WX93 1383 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 ERBB3P21860 1342 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 CCT8L1PA6NM43 557 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 CDH2P19022 906 aaPredicted RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 EEF1DP29692 281 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 LSP1P33241 339 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 NR1I3Q14994 352 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 NAA35Q5VZE5 725 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 KAZNQ674X7 775 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 EPM2AIP1Q7L775 607 aaPredicted RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 MTBPQ96DY7 904 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 FUT8Q9BYC5 575 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 TRIM9Q9C026 710 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 XAB2Q9HCS7 855 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 CNOT8Q9UFF9 292 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 PRPSAP2O60256 369 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 GHRP10912 638 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 CDC27P30260 824 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 SFNP31947 248 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 NPEPPSP55786 919 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 CHRNDQ07001 517 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 MYBPC2Q14324 1141 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 LRRC24Q50LG9 513 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 CYFIP1Q7L576 1253 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 TRAPPC11Q7Z392 1133 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 CCNJLQ8IV13 435 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 TTLL11Q8NHH1 800 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 DDI1Q8WTU0 396 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 GPHNQ9NQX3 736 aaPredicted RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 DNAJC17Q9NVM6 304 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 M0QZ92 97 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 SGK1O00141 431 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 TMEM253P0C7T8 217 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 BRD2P25440 801 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 KCNH2Q12809 1159 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 BEND6Q5SZJ8 279 aaPredicted RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 TOGARAM2Q6ZUX3 1019 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 ZC3H18Q86VM9 953 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 FBXL16Q8N461 479 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 TC2NQ8N9U0 490 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 HDAC11Q96DB2 347 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 ANO3Q9BYT9 981 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 MTO1Q9Y2Z2 717 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 KIF21AQ7Z4S6 1674 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 LRRC53A6NM62 1247 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 PALMO75781 387 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 NR3C1P04150 777 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 BMP3P12645 472 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 MARK3P27448 753 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 NUP107P57740 925 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 RCN2Q14257 317 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 KNOP1Q1ED39 458 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 FAM47AQ5JRC9 791 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 NXNQ6DKJ4 435 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 GRAMD4Q6IC98 578 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 COL23A1Q86Y22 540 aaPredicted RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 KRT35Q92764 455 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 FGD4Q96M96 766 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 IL1RAPL1Q9NZN1 696 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 ZBTB21Q9ULJ3 1066 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 SUGT1Q9Y2Z0 365 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 A0A1B0GW55 424 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 F8W031 263 aaPredicted RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 GNPATO15228 680 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 DUX4L2P0CJ85 424 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 DUX4L3P0CJ86 424 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 DUX4L4P0CJ87 422 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 DUX4L5P0CJ88 424 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 DUX4L6P0CJ89 424 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 DUX4L7P0CJ90 424 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 PCYT1AP49585 367 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 ABCE1P61221 599 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 C2orf54Q08AI8 447 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 KYAT1Q16773 422 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 FAM133BQ5BKY9 247 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 ANKS1AQ92625 1134 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 SNF8Q96H20 258 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 WDR24Q96S15 920 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 DUX4Q9UBX2 424 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 FBXO40Q9UH90 709 aa6.57□□□□□ -1.36
PRPF4B-205ENST00000480058 GFAPP14136 432 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 DDX5P17844 614 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 DPH6Q7L8W6 267 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 EFL1Q7Z2Z2 1120 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 RDH13Q8NBN7 331 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 UHMK1Q8TAS1 419 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 C7orf25Q9BPX7 421 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 CCNL1Q9UK58 526 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 FBXL5Q9UKA1 691 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 KANSL1LA0AUZ9 987 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms