RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 RAC3P60763 192 aa7.6□□□□□ -1.19
COMMD3-212ENST00000479958 CHST14Q8NCH0 376 aa7.6□□□□□ -1.19
COMMD3-212ENST00000479958 CDK5RAP1Q96SZ6 601 aaKnown RBP7.6□□□□□ -1.19
COMMD3-212ENST00000479958 C1QTNF3Q9BXJ4 246 aa7.6□□□□□ -1.19
COMMD3-212ENST00000479958 ACSS2Q9NR19 701 aa7.6□□□□□ -1.19
COMMD3-212ENST00000479958 FYCO1Q9BQS8 1478 aa7.59□□□□□ -1.19
COMMD3-212ENST00000479958 KIAA0556O60303 1618 aa7.59□□□□□ -1.19
COMMD3-212ENST00000479958 A0A0G2JNJ9 132 aa7.59□□□□□ -1.19
COMMD3-212ENST00000479958 GPR42O15529 346 aa7.59□□□□□ -1.19
COMMD3-212ENST00000479958 MPIG6BO95866 241 aa7.59□□□□□ -1.19
COMMD3-212ENST00000479958 ZNF888P0CJ79 500 aaPredicted RBP7.59□□□□□ -1.19
COMMD3-212ENST00000479958 INSRRP14616 1297 aa7.59□□□□□ -1.19
COMMD3-212ENST00000479958 ADCY8P40145 1251 aa7.59□□□□□ -1.19
COMMD3-212ENST00000479958 MEOX1P50221 254 aa7.59□□□□□ -1.19
COMMD3-212ENST00000479958 EIF4HQ15056 248 aaKnown RBP7.59□□□□□ -1.19
COMMD3-212ENST00000479958 ZNF174Q15697 407 aa7.59□□□□□ -1.19
COMMD3-212ENST00000479958 CFAP100Q494V2 611 aa7.59□□□□□ -1.19
COMMD3-212ENST00000479958 GIMAP8Q8ND71 665 aaPredicted RBP7.59□□□□□ -1.19
COMMD3-212ENST00000479958 ERCC4Q92889 916 aaPredicted RBP7.59□□□□□ -1.19
COMMD3-212ENST00000479958 PTPN18Q99952 460 aa7.59□□□□□ -1.19
COMMD3-212ENST00000479958 MAGEC2Q9UBF1 373 aaPredicted RBP7.59□□□□□ -1.19
COMMD3-212ENST00000479958 Q9UFV3 132 aa7.59□□□□□ -1.19
COMMD3-212ENST00000479958 ST6GALNAC2Q9UJ37 374 aa7.59□□□□□ -1.19
COMMD3-212ENST00000479958 LRRC9Q6ZRR7 1453 aa7.59□□□□□ -1.19
COMMD3-212ENST00000479958 H7C1D1 291 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 DNAJC8O75937 253 aaPredicted RBP7.58□□□□□ -1.2
COMMD3-212ENST00000479958 CYP17A1P05093 508 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 APEX1P27695 318 aaKnown RBP7.58□□□□□ -1.2
COMMD3-212ENST00000479958 MECP2P51608 486 aaKnown RBP7.58□□□□□ -1.2
COMMD3-212ENST00000479958 KIF11P52732 1056 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 CD83Q01151 205 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 MAP3K12Q12852 859 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 PABPC4Q13310 644 aaKnown RBP eCLIP7.58□□□□□ -1.22e-13■□□□□ 8.7
COMMD3-212ENST00000479958 HS1BP3Q53T59 392 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 PIK3R6Q5UE93 754 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 GRAMD4Q6IC98 578 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 LRSAM1Q6UWE0 723 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 LRRC37BQ96QE4 947 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 KRTAP4-5Q9BYR2 181 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 SEMA4AQ9H3S1 761 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 KANSL2Q9H9L4 492 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 INTS7Q9NVH2 962 aaKnown RBP7.58□□□□□ -1.2
COMMD3-212ENST00000479958 TCAF1Q9Y4C2 921 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 MAP3K1Q13233 1512 aa7.58□□□□□ -1.2
COMMD3-212ENST00000479958 CFAP43Q8NDM7 1665 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 PTPDC1A2A3K4 754 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 ZNF623O75123 536 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 GLRX3O76003 335 aaKnown RBP7.57□□□□□ -1.2
COMMD3-212ENST00000479958 JMJD7P0C870 316 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 ZNF20P17024 532 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 FNTBP49356 437 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 RRADP55042 308 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 MOGSQ13724 837 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 CATSPEREQ5SY80 951 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 LCE5AQ5TCM9 118 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 CDCA2Q69YH5 1023 aaPredicted RBP7.57□□□□□ -1.2
COMMD3-212ENST00000479958 RTKN2Q8IZC4 609 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 APPBP2Q92624 585 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 NEIL1Q96FI4 390 aaPredicted RBP7.57□□□□□ -1.2
COMMD3-212ENST00000479958 RNPC3Q96LT9 517 aaKnown RBP7.57□□□□□ -1.2
COMMD3-212ENST00000479958 PCIF1Q9H4Z3 704 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 PIF1Q9H611 641 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 CDC42EP3Q9UKI2 254 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 PTPN22Q9Y2R2 807 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 NR2E1Q9Y466 385 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 PHLDB1Q86UU1 1377 aa7.57□□□□□ -1.2
COMMD3-212ENST00000479958 PRG4Q92954 1404 aaPredicted RBP7.57□□□□□ -1.2
COMMD3-212ENST00000479958 ICAM4Q14773 271 aa7.56□□□□□ -1.2
COMMD3-212ENST00000479958 TM4SF20Q53R12 229 aa7.56□□□□□ -1.2
COMMD3-212ENST00000479958 KANK2Q63ZY3 851 aa7.56□□□□□ -1.2
COMMD3-212ENST00000479958 C16orf86Q6ZW13 317 aa7.56□□□□□ -1.2
COMMD3-212ENST00000479958 TAX1BP1Q86VP1 789 aa7.56□□□□□ -1.2
COMMD3-212ENST00000479958 NME9Q86XW9 330 aa7.56□□□□□ -1.2
COMMD3-212ENST00000479958 DNERQ8NFT8 737 aa7.56□□□□□ -1.2
COMMD3-212ENST00000479958 KRTAP9-3Q9BYQ3 159 aa7.56□□□□□ -1.2
COMMD3-212ENST00000479958 ZKSCAN5Q9Y2L8 839 aa7.56□□□□□ -1.2
COMMD3-212ENST00000479958 CDK13Q14004 1512 aaKnown RBP7.56□□□□□ -1.2
COMMD3-212ENST00000479958 MAGI3Q5TCQ9 1506 aa7.56□□□□□ -1.2
COMMD3-212ENST00000479958 ERCC6L2Q5T890 1561 aa7.55□□□□□ -1.2
COMMD3-212ENST00000479958 RASSF10A6NK89 507 aa7.55□□□□□ -1.2
COMMD3-212ENST00000479958 TRAF5O00463 557 aa7.55□□□□□ -1.2
COMMD3-212ENST00000479958 ALDH6A1Q02252 535 aaKnown RBP7.55□□□□□ -1.2
COMMD3-212ENST00000479958 FSTL4Q6MZW2 842 aa7.55□□□□□ -1.2
COMMD3-212ENST00000479958 USP30Q70CQ3 517 aa7.55□□□□□ -1.2
COMMD3-212ENST00000479958 FOXB1Q99853 325 aa7.55□□□□□ -1.2
COMMD3-212ENST00000479958 KLC2Q9H0B6 622 aa7.55□□□□□ -1.2
COMMD3-212ENST00000479958 MEGF9Q9H1U4 602 aa7.55□□□□□ -1.2
COMMD3-212ENST00000479958 C12orf65Q9H3J6 166 aaKnown RBP7.55□□□□□ -1.2
COMMD3-212ENST00000479958 IFT57Q9NWB7 429 aa7.55□□□□□ -1.2
COMMD3-212ENST00000479958 B4GALT6Q9UBX8 382 aa7.55□□□□□ -1.2
COMMD3-212ENST00000479958 PLB1Q6P1J6 1458 aa7.55□□□□□ -1.2
COMMD3-212ENST00000479958 PATE3B3GLJ2 98 aa7.54□□□□□ -1.2
COMMD3-212ENST00000479958 C1QTNF3-AMACRE9PGA6 284 aa7.54□□□□□ -1.2
COMMD3-212ENST00000479958 CR2P20023 1033 aa7.54□□□□□ -1.2
COMMD3-212ENST00000479958 SDSP20132 328 aa7.54□□□□□ -1.2
COMMD3-212ENST00000479958 ROM1Q03395 351 aa7.54□□□□□ -1.2
COMMD3-212ENST00000479958 ZNF460Q14592 562 aa7.54□□□□□ -1.2
COMMD3-212ENST00000479958 PUM1Q14671 1186 aaKnown RBP eCLIP7.54□□□□□ -1.2
COMMD3-212ENST00000479958 TMEM200BQ69YZ2 307 aa7.54□□□□□ -1.2
COMMD3-212ENST00000479958 TRIM68Q6AZZ1 485 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms