RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 VAT1LQ9HCJ6 419 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 FBXO28Q9NVF7 368 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 MORF4L1Q9UBU8 362 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 FBXO40Q9UH90 709 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.1□□□□□ -1.27
SF3B1-209ENST00000479532 RLFQ13129 1914 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 MGAMO43451 1857 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 GOLGA6L3A6NEY3 463 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 ATP2A1O14983 1001 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 ZBTB5O15062 677 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 GADD45BO75293 160 aaPredicted RBP7.09□□□□□ -1.27
SF3B1-209ENST00000479532 CTSHP09668 335 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 MAPK4P31152 587 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 STAT3P40763 770 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 CD97P48960 835 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 FCGRTP55899 365 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 CCT2P78371 535 aaKnown RBP7.09□□□□□ -1.27
SF3B1-209ENST00000479532 SSRP1Q08945 709 aaKnown RBP7.09□□□□□ -1.27
SF3B1-209ENST00000479532 TMEM132BQ14DG7 1078 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 SNRNP48Q6IEG0 339 aaKnown RBP7.09□□□□□ -1.27
SF3B1-209ENST00000479532 C17orf99Q6UX52 265 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 PRR23CQ6ZRP0 262 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 TMTC3Q6ZXV5 915 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 RASGRP2Q7LDG7 609 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 RAB44Q7Z6P3 723 aaPredicted RBP7.09□□□□□ -1.27
SF3B1-209ENST00000479532 NCAPG2Q86XI2 1143 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 FBXO11Q86XK2 927 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 HOMER1Q86YM7 354 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 HSCBQ8IWL3 235 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 CPXCR1Q8N123 301 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 SHCBP1Q8NEM2 672 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 OR13H1Q8NG92 308 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 WASF1Q92558 559 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 COA7Q96BR5 231 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 KIF2CQ99661 725 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 SLC30A3Q99726 388 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 AMNQ9BXJ7 453 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 SPATC1LQ9H0A9 340 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 MROH8Q9H579 483 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 RIOX1Q9H6W3 641 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 RRAGDQ9NQL2 400 aaPredicted RBP7.09□□□□□ -1.27
SF3B1-209ENST00000479532 CCPG1Q9ULG6 757 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 ADAMTS5Q9UNA0 930 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 KIF3AQ9Y496 699 aa7.09□□□□□ -1.27
SF3B1-209ENST00000479532 RBBP6Q7Z6E9 1792 aaKnown RBP7.08□□□□□ -1.28
SF3B1-209ENST00000479532 ABCB11O95342 1321 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 ADGRA2Q96PE1 1338 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 FSD2A1L4K1 749 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 hCG_1984214I3L0E3 225 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 TNPO2O14787 897 aaKnown RBP7.08□□□□□ -1.28
SF3B1-209ENST00000479532 GIPC1O14908 333 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 PFKFB2O60825 505 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 PLEKHA8P1O95397 391 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 ICAM1P05362 532 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 ALAS1P13196 640 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 XBP1P17861 261 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 LACTBP83111 547 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-209ENST00000479532 FANCCQ00597 558 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 PLEKHH3Q7Z736 793 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 MCF2L2Q86YR7 1114 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 RIOX2Q8IUF8 465 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 ZNF713Q8N859 430 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-209ENST00000479532 CHST13Q8NET6 341 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 CCDC12Q8WUD4 166 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-209ENST00000479532 BHMTQ93088 406 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 NAP1L5Q96NT1 182 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-209ENST00000479532 RNF26Q9BY78 433 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-209ENST00000479532 BCO2Q9BYV7 579 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 ACAD9Q9H845 621 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 JMJD4Q9H9V9 463 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 RAVER2Q9HCJ3 691 aaKnown RBP7.08□□□□□ -1.28
SF3B1-209ENST00000479532 LATS2Q9NRM7 1088 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 SLC5A4Q9NY91 659 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 BTBD7Q9P203 1132 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 RBPJLQ9UBG7 517 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 TPCN1Q9ULQ1 816 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 MRPL11Q9Y3B7 192 aaKnown RBP7.08□□□□□ -1.28
SF3B1-209ENST00000479532 PLXNB2O15031 1838 aa7.08□□□□□ -1.28
SF3B1-209ENST00000479532 FOXN1O15353 648 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 STRNO43815 780 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 CNMDO75829 334 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 DEXIO95424 95 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 PSAPP07602 524 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 HSPA8P11142 646 aaKnown RBP7.07□□□□□ -1.28
SF3B1-209ENST00000479532 FCER1AP12319 257 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 EDN3P14138 238 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 IFNAR1P17181 557 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 FSTP19883 344 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 ERCC5P28715 1186 aaPredicted RBP7.07□□□□□ -1.28
SF3B1-209ENST00000479532 CDC27P30260 824 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 ZNF76P36508 570 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 PSMC4P43686 418 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 PRMT2P55345 433 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 SNAP25P60880 206 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 HMGN5P82970 282 aaKnown RBP7.07□□□□□ -1.28
SF3B1-209ENST00000479532 SCRN1Q12765 414 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 GRM2Q14416 872 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 BECN1Q14457 450 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 KCTD2Q14681 263 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 ME3Q16798 604 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms