RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 PGS1Q32NB8 556 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 MROH9Q5TGP6 573 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 MBNL2Q5VZF2 373 aaKnown RBP9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 BTBD8Q5XKL5 378 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 DARS2Q6PI48 645 aaKnown RBP9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 NPNTQ6UXI9 565 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 TMPRSS7Q7RTY8 843 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 COL23A1Q86Y22 540 aaPredicted RBP9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 LYSMD2Q8IV50 215 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 SMAP1Q8IYB5 467 aaPredicted RBP9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 CPXCR1Q8N123 301 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 HHIPL1Q96JK4 782 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 G6PC3Q9BUM1 346 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 SSBP4Q9BWG4 385 aaPredicted RBP9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 KCTD10Q9H3F6 313 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 ATP13A1Q9HD20 1204 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 TRMT13Q9NUP7 481 aaKnown RBP9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 RTEL1Q9NZ71 1219 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 DPP7Q9UHL4 492 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 LZTS1Q9Y250 596 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 KRIT1O00522 736 aa9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 SLC5A3P53794 718 aa9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 CYP27A1Q02318 531 aa9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 DUSP4Q13115 394 aa9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 TRIM25Q14258 630 aaKnown RBP9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 STEAP3Q658P3 488 aa9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 SWSAP1Q6NVH7 229 aa9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 SLCO6A1Q86UG4 719 aa9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 NME8Q8N427 588 aa9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 ACRBPQ8NEB7 543 aa9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 AUTS2Q8WXX7 1259 aa9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 RIN2Q8WYP3 895 aaPredicted RBP9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 FOXRED1Q96CU9 486 aaPredicted RBP9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 RAX2Q96IS3 184 aa9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 MYL10Q9BUA6 226 aa9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 RIC8BQ9NVN3 520 aa9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 EBF1Q9UH73 591 aa9.08□□□□□ -0.96
GAPVD1-217ENST00000479511 PITPNM2Q9BZ72 1349 aa9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 MMEP08473 750 aa9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 HTR1BP28222 390 aa9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 RNF220Q5VTB9 566 aa9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 DUSP27Q5VZP5 1158 aa9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 RTN4RL1Q86UN2 441 aaPredicted RBP9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 NKAPQ8N5F7 415 aaKnown RBP9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 LZTR1Q8N653 840 aa9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 C7orf31Q8N865 590 aa9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 NLGN2Q8NFZ4 835 aa9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 ERCC4Q92889 916 aaPredicted RBP9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 MAP6Q96JE9 813 aa9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 CRB3Q9BUF7 120 aa9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 IFT122Q9HBG6 1241 aa9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 MKNK2Q9HBH9 465 aa9.07□□□□□ -0.96
GAPVD1-217ENST00000479511 ZNF608Q9ULD9 1512 aaPredicted RBP9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 KDM6BO15054 1643 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 PRAMEF25A6NGN4 478 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 CCDC154A6NI56 674 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 RASA4BC9J798 803 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 GOLIM4O00461 696 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 RASA4O43374 803 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 TADA3O75528 432 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 MTHFD2P13995 350 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 PEX2P28328 305 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 GJA4P35212 333 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 PIK3CBP42338 1070 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 SARSP49591 514 aaKnown RBP9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 AGFG1P52594 562 aaKnown RBP9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 LGALS4P56470 323 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 CCT2P78371 535 aaKnown RBP9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 FOXD4Q12950 439 aaPredicted RBP9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 TRIM14Q14142 442 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 EMC4Q5J8M3 183 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 NME9Q86XW9 330 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 PHYKPLQ8IUZ5 450 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 PAF1Q8N7H5 531 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 CLEC4DQ8WXI8 215 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 ASB15Q8WXK1 588 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 CGRRF1Q99675 332 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 TNFRSF10DQ9UBN6 386 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 ANAPC4Q9UJX5 808 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 RAXQ9Y2V3 346 aa9.06□□□□□ -0.96
GAPVD1-217ENST00000479511 URB2Q14146 1524 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 EIF4G3O43432 1585 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 ACOT7O00154 380 aa9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 HTRA2O43464 458 aaPredicted RBP9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 PRPF6O94906 941 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 NTRK1P04629 796 aa9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 MSL3P1P0C860 447 aa9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 PRIM2P49643 509 aa9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 CDK17Q00537 523 aa9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 LMOD3Q0VAK6 560 aa9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 MYBPC3Q14896 1274 aa9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 C3orf36Q3SXR2 165 aa9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 UNQ6494/PRO21346Q6UXR6 183 aa9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 CILP2Q8IUL8 1156 aa9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 KRT78Q8N1N4 520 aa9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 PLD6Q8N2A8 252 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 DEPTORQ8TB45 409 aa9.05□□□□□ -0.96
GAPVD1-217ENST00000479511 RIPOR3Q96MK2 946 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms