RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.72□□□□□ -0.53
EWSR1-216ENST00000479135 OTUB1Q96FW1 271 aaPredicted RBP11.72□□□□□ -0.53
EWSR1-216ENST00000479135 CCDC163A0A0D9SF12 145 aa11.72□□□□□ -0.53
EWSR1-216ENST00000479135 PGM3O95394 542 aa11.72□□□□□ -0.53
EWSR1-216ENST00000479135 SOAT1P35610 550 aa11.72□□□□□ -0.53
EWSR1-216ENST00000479135 NNTQ13423 1086 aa11.72□□□□□ -0.53
EWSR1-216ENST00000479135 DGKKQ5KSL6 1271 aa11.72□□□□□ -0.53
EWSR1-216ENST00000479135 GATAD2AQ86YP4 633 aa11.72□□□□□ -0.53
EWSR1-216ENST00000479135 ZNF579Q8NAF0 562 aaKnown RBP11.72□□□□□ -0.53
EWSR1-216ENST00000479135 SUCLG2Q96I99 432 aa11.72□□□□□ -0.53
EWSR1-216ENST00000479135 DIS3Q9Y2L1 958 aaKnown RBP11.72□□□□□ -0.53
EWSR1-216ENST00000479135 KIAA0586Q9BVV6 1533 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 HSMCR30P0CW71 290 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 SGO2Q562F6 1265 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 KRT39Q6A163 491 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 MCF2L2Q86YR7 1114 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 TRIM45Q9H8W5 580 aaPredicted RBP11.71□□□□□ -0.53
EWSR1-216ENST00000479135 DTNAQ9Y4J8 743 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 IVNS1ABPQ9Y6Y0 642 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 FKBP9O95302 570 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 MMEP08473 750 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 KCNA2P16389 499 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 PSMD7P51665 324 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 CUL4AQ13619 759 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 ERMARDQ5T6L9 678 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 FKBP9P1Q75LS8 142 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 MCRS1Q96EZ8 462 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 RMI1Q9H9A7 625 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 PICK1Q9NRD5 415 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 BTN3A3O00478 584 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 TCEA3O75764 348 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 CFBP00751 764 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 TUBB4AP04350 444 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 LIG4P49917 911 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 SRP54P61011 504 aaKnown RBP11.71□□□□□ -0.53
EWSR1-216ENST00000479135 TCP10Q12799 353 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 LPIN1Q14693 890 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 C4orf46Q504U0 113 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 ANO5Q75V66 913 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 DEPTORQ8TB45 409 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 FAM81BQ96LP2 452 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 NRDE2Q9H7Z3 1164 aa11.71□□□□□ -0.53
EWSR1-216ENST00000479135 POTECB2RU33 542 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 ACCSLQ4AC99 568 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 NBPF5PQ86XG9 351 aaPredicted RBP11.71□□□□□ -0.54
EWSR1-216ENST00000479135 SLC9A7Q96T83 725 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 MYL10Q9BUA6 226 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 EPN3Q9H201 632 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 PKD2L2Q9NZM6 624 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 ZNF215Q9UL58 517 aaPredicted RBP11.71□□□□□ -0.54
EWSR1-216ENST00000479135 APOBEC2Q9Y235 224 aaKnown RBP11.71□□□□□ -0.54
EWSR1-216ENST00000479135 HECW1Q76N89 1606 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 C9orf84Q5VXU9 1444 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 PRG4Q92954 1404 aaPredicted RBP11.71□□□□□ -0.54
EWSR1-216ENST00000479135 INSRP06213 1382 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 UBA6A0AVT1 1052 aaPredicted RBP11.71□□□□□ -0.54
EWSR1-216ENST00000479135 C16orf96A6NNT2 1141 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 TMCC1O94876 653 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 LGALS3BPQ08380 585 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 C19orf18Q8NEA5 215 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 BHLHE41Q9C0J9 482 aaPredicted RBP11.71□□□□□ -0.54
EWSR1-216ENST00000479135 PDE5AO76074 875 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 OR7A10O76100 309 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 MSR1P21757 451 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 VPS39Q96JC1 886 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 VPS50Q96JG6 964 aa11.71□□□□□ -0.54
EWSR1-216ENST00000479135 DDX50Q9BQ39 737 aaKnown RBP11.71□□□□□ -0.54
EWSR1-216ENST00000479135 C5orf58C9J3I9 102 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 E5RI56 91 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 TNFRSF21O75509 655 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 TRIM49P0CI25 452 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 TRIM49CP0CI26 452 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 IRX1P78414 480 aaPredicted RBP11.7□□□□□ -0.54
EWSR1-216ENST00000479135 LRRC14Q15048 493 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 HS1BP3Q53T59 392 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 ZNF57Q68EA5 555 aaPredicted RBP11.7□□□□□ -0.54
EWSR1-216ENST00000479135 ESRP1Q6NXG1 681 aaKnown RBP11.7□□□□□ -0.54
EWSR1-216ENST00000479135 MICU2Q8IYU8 434 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 CAPSLQ8WWF8 208 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 ZNF556Q9HAH1 456 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 SPTLC3Q9NUV7 552 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 TESPA1A2RU30 521 aaPredicted RBP11.7□□□□□ -0.54
EWSR1-216ENST00000479135 IDH3BO43837 385 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 STAT1P42224 750 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 MAPK10P53779 464 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 CYLC2Q14093 348 aaPredicted RBP11.7□□□□□ -0.54
EWSR1-216ENST00000479135 ACAD11Q709F0 780 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 MICALL2Q8IY33 904 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 HNRNPRO43390 633 aaKnown RBP11.7□□□□□ -0.54
EWSR1-216ENST00000479135 DGKIO75912 1065 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 ENO1P06733 434 aaKnown RBP11.7□□□□□ -0.54
EWSR1-216ENST00000479135 DMTNQ08495 405 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 KLHL12Q53G59 568 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 NSMFQ6X4W1 530 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 SFR1Q86XK3 245 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 SEC16BQ96JE7 1060 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 CCDC115Q96NT0 180 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 RHOBTB2Q9BYZ6 727 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 PITPNM3Q9BZ71 974 aa11.7□□□□□ -0.54
EWSR1-216ENST00000479135 HSPBP1Q9NZL4 362 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 193.2 ms