RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PANX2Q96RD6 677 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 LZTS2Q9BRK4 669 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 NAA15Q9BXJ9 866 aaKnown RBP5.55□□□□□ -1.52
SF3B6-202ENST00000478050 ZNF287Q9HBT7 754 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 MCM9Q9NXL9 1143 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 SRP68Q9UHB9 627 aaKnown RBP5.55□□□□□ -1.52
SF3B6-202ENST00000478050 DNAI1Q9UI46 699 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 PCDHA4Q9UN74 947 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 PPP2R2CQ9Y2T4 447 aa5.55□□□□□ -1.52
SF3B6-202ENST00000478050 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.55□□□□□ -1.525e-11■□□□□ 10.4
SF3B6-202ENST00000478050 LTBP1Q14766 1721 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 A0A087X0B3 334 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 CCDC194A0A1B0GVG4 234 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 hCG_1642624A0A1W2PR95 340 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 VWA3AA6NCI4 1184 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 WTIPA6NIX2 430 aaPredicted RBP5.54□□□□□ -1.52
SF3B6-202ENST00000478050 LAD1O00515 517 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 DDX3YO15523 660 aaKnown RBP5.54□□□□□ -1.52
SF3B6-202ENST00000478050 GAS2O43903 313 aaKnown RBP5.54□□□□□ -1.52
SF3B6-202ENST00000478050 MYL1P05976 194 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 JUNBP17275 347 aaPredicted RBP5.54□□□□□ -1.52
SF3B6-202ENST00000478050 TM4SF1P30408 202 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 CASQ1P31415 396 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 PBX1P40424 430 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 AFMP43652 599 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 CBX1P83916 185 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 TFAP4Q01664 338 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 ORC2Q13416 577 aaPredicted RBP5.54□□□□□ -1.52
SF3B6-202ENST00000478050 TRIM14Q14142 442 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 NAA30Q147X3 362 aaPredicted RBP5.54□□□□□ -1.52
SF3B6-202ENST00000478050 DALRD3Q5D0E6 543 aaKnown RBP5.54□□□□□ -1.52
SF3B6-202ENST00000478050 UTP14CQ5TAP6 766 aaKnown RBP5.54□□□□□ -1.52
SF3B6-202ENST00000478050 RCSD1Q6JBY9 416 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 FDX2Q6P4F2 183 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 TRIM65Q6PJ69 517 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.54□□□□□ -1.52
SF3B6-202ENST00000478050 PIK3AP1Q6ZUJ8 805 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 LDHDQ86WU2 507 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 ZNF444Q8N0Y2 327 aaPredicted RBP5.54□□□□□ -1.52
SF3B6-202ENST00000478050 FBXL6Q8N531 539 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 UBASH3BQ8TF42 649 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 MYO19Q96H55 970 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 MED15Q96RN5 788 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 OSBPL1AQ9BXW6 950 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 GTPBP4Q9BZE4 634 aaKnown RBP5.54□□□□□ -1.52
SF3B6-202ENST00000478050 MAGEF1Q9HAY2 307 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 MKNK2Q9HBH9 465 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 SAMSN1Q9NSI8 373 aaKnown RBP5.54□□□□□ -1.52
SF3B6-202ENST00000478050 LIMA1Q9UHB6 759 aaKnown RBP5.54□□□□□ -1.52
SF3B6-202ENST00000478050 RWDD2AQ9UIY3 292 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 DDX41Q9UJV9 622 aaKnown RBP5.54□□□□□ -1.52
SF3B6-202ENST00000478050 DCTN4Q9UJW0 460 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 HIF3AQ9Y2N7 669 aa5.54□□□□□ -1.52
SF3B6-202ENST00000478050 ARFGEF1Q9Y6D6 1849 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 GREB1LQ9C091 1923 aaPredicted RBP5.53□□□□□ -1.52
SF3B6-202ENST00000478050 NPHP1O15259 732 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 NMT2O60551 498 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 URI1O94763 535 aaPredicted RBP5.53□□□□□ -1.52
SF3B6-202ENST00000478050 CCDC175P0C221 793 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 TSPY3P0CV98 308 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 TSPY8P0CW00 308 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 H2AFXP16104 143 aaPredicted RBP5.53□□□□□ -1.52
SF3B6-202ENST00000478050 DPEP1P16444 411 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 SMARCA1P28370 1054 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 WEE1P30291 646 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 MCM7P33993 719 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 RFC4P35249 363 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 PRPHP41219 470 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 PPP1R2P41236 205 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 STAT6P42226 847 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 PREPP48147 710 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 STX17P56962 302 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 ATP11AP98196 1134 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 TAGLNQ01995 201 aaKnown RBP5.53□□□□□ -1.52
SF3B6-202ENST00000478050 GABPB1Q06547 395 aaPredicted RBP5.53□□□□□ -1.52
SF3B6-202ENST00000478050 GOLGA8FQ08AF8 430 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 GOLGA8DPQ0D2H9 430 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 PAK1Q13153 545 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 TUBB2AQ13885 445 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 KCNB1Q14721 858 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 ELF2Q15723 593 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 ZNF658Q5TYW1 1059 aaPredicted RBP5.53□□□□□ -1.52
SF3B6-202ENST00000478050 RRAGBQ5VZM2 374 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 KLHL10Q6JEL2 608 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 DTHD1Q6ZMT9 781 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 APTXQ7Z2E3 356 aaKnown RBP5.53□□□□□ -1.52
SF3B6-202ENST00000478050 CNGA4Q8IV77 575 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 ZSCAN29Q8IWY8 852 aaPredicted RBP5.53□□□□□ -1.52
SF3B6-202ENST00000478050 C4orf32Q8N8J7 132 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 IGSF22Q8N9C0 903 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 MNS1Q8NEH6 495 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 SH3RF3Q8TEJ3 882 aaPredicted RBP5.53□□□□□ -1.52
SF3B6-202ENST00000478050 CCDC12Q8WUD4 166 aaPredicted RBP5.53□□□□□ -1.52
SF3B6-202ENST00000478050 CCDC47Q96A33 483 aaKnown RBP5.53□□□□□ -1.52
SF3B6-202ENST00000478050 FAM122AQ96E09 287 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 TUBB2BQ9BVA1 445 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 SPZ1Q9BXG8 430 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 CCSER1Q9C0I3 900 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 RNF208Q9H0X6 261 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 CUEDC2Q9H467 287 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms