RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 CUX2O14529 1486 aa6.47□□□□□ -1.37
LMBR1-216ENST00000477983 TNIKQ9UKE5 1360 aa6.46□□□□□ -1.37
LMBR1-216ENST00000477983 URB2Q14146 1524 aaKnown RBP6.46□□□□□ -1.37
LMBR1-216ENST00000477983 GOLGA6L22H0YM25 854 aa6.46□□□□□ -1.38
LMBR1-216ENST00000477983 SCDO00767 359 aa6.46□□□□□ -1.38
LMBR1-216ENST00000477983 MOGSQ13724 837 aa6.46□□□□□ -1.38
LMBR1-216ENST00000477983 EXTL1Q92935 676 aa6.46□□□□□ -1.38
LMBR1-216ENST00000477983 FAM89AQ96GI7 184 aa6.46□□□□□ -1.38
LMBR1-216ENST00000477983 GBP4Q96PP9 640 aa6.46□□□□□ -1.38
LMBR1-216ENST00000477983 SRPK1Q96SB4 655 aaKnown RBP6.46□□□□□ -1.38
LMBR1-216ENST00000477983 DNAJC7Q99615 494 aa6.46□□□□□ -1.38
LMBR1-216ENST00000477983 KIAA1683Q9H0B3 1180 aa6.46□□□□□ -1.38
LMBR1-216ENST00000477983 C12orf65Q9H3J6 166 aaKnown RBP6.46□□□□□ -1.38
LMBR1-216ENST00000477983 NELFAQ9H3P2 528 aa6.46□□□□□ -1.38
LMBR1-216ENST00000477983 NDOR1Q9UHB4 597 aa6.46□□□□□ -1.38
LMBR1-216ENST00000477983 KIF21BO75037 1637 aa6.46□□□□□ -1.38
LMBR1-216ENST00000477983 RAD54L2Q9Y4B4 1467 aa6.46□□□□□ -1.38
LMBR1-216ENST00000477983 RASSF10A6NK89 507 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 FOXP2O15409 715 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 MRE11P49959 708 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 HGFACQ04756 655 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 FOXL1Q12952 345 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 KLF10Q13118 480 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 NRN1LQ496H8 165 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 SOGA3Q5TF21 947 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 GRAMD4Q6IC98 578 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 FSTL4Q6MZW2 842 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 OTOP2Q7RTS6 562 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 FILIP1Q7Z7B0 1213 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 CISD2Q8N5K1 135 aaKnown RBP6.45□□□□□ -1.38
LMBR1-216ENST00000477983 WDR48Q8TAF3 677 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 OR14A2Q96R54 314 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 ZNF341Q9BYN7 854 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 COQ6Q9Y2Z9 468 aa6.45□□□□□ -1.38
LMBR1-216ENST00000477983 SLC12A8A0AV02 714 aa6.44□□□□□ -1.38
LMBR1-216ENST00000477983 PRAMEF22A3QJZ6 481 aa6.44□□□□□ -1.38
LMBR1-216ENST00000477983 NPIPB8E9PQR5 432 aa6.44□□□□□ -1.38
LMBR1-216ENST00000477983 RASGRP1O95267 797 aa6.44□□□□□ -1.38
LMBR1-216ENST00000477983 APPP05067 770 aa6.44□□□□□ -1.38
LMBR1-216ENST00000477983 MEOX1P50221 254 aa6.44□□□□□ -1.38
LMBR1-216ENST00000477983 SF3A1Q15459 793 aaKnown RBP6.44□□□□□ -1.38
LMBR1-216ENST00000477983 MRPL4Q9BYD3 311 aaKnown RBP6.44□□□□□ -1.38
LMBR1-216ENST00000477983 SLITRK6Q9H5Y7 841 aa6.44□□□□□ -1.38
LMBR1-216ENST00000477983 PLA2G3Q9NZ20 509 aa6.44□□□□□ -1.38
LMBR1-216ENST00000477983 POLA1P09884 1462 aaPredicted RBP6.44□□□□□ -1.38
LMBR1-216ENST00000477983 RAPGEF2Q9Y4G8 1499 aa6.44□□□□□ -1.38
LMBR1-216ENST00000477983 CEP162Q5TB80 1403 aa6.43□□□□□ -1.38
LMBR1-216ENST00000477983 TCRBV16S1A1N1A0A5B0 115 aa6.43□□□□□ -1.38
LMBR1-216ENST00000477983 ZBTB48P10074 688 aaPredicted RBP6.43□□□□□ -1.38
LMBR1-216ENST00000477983 RANGAP1P46060 587 aaPredicted RBP6.43□□□□□ -1.38
LMBR1-216ENST00000477983 OTOP1Q7RTM1 612 aa6.43□□□□□ -1.38
LMBR1-216ENST00000477983 GPR135Q8IZ08 494 aa6.43□□□□□ -1.38
LMBR1-216ENST00000477983 RTKN2Q8IZC4 609 aa6.43□□□□□ -1.38
LMBR1-216ENST00000477983 BCL6BQ8N143 479 aaPredicted RBP6.43□□□□□ -1.38
LMBR1-216ENST00000477983 ZSWIM2Q8NEG5 633 aa6.43□□□□□ -1.38
LMBR1-216ENST00000477983 CALML6Q8TD86 181 aa6.43□□□□□ -1.38
LMBR1-216ENST00000477983 MENTQ9BUN1 341 aa6.43□□□□□ -1.38
LMBR1-216ENST00000477983 ACRV1P26436 265 aa6.42□□□□□ -1.38
LMBR1-216ENST00000477983 APEX1P27695 318 aaKnown RBP6.42□□□□□ -1.38
LMBR1-216ENST00000477983 PTH1RQ03431 593 aa6.42□□□□□ -1.38
LMBR1-216ENST00000477983 CATSPEREQ5SY80 951 aa6.42□□□□□ -1.38
LMBR1-216ENST00000477983 ABHD17CQ6PCB6 329 aa6.42□□□□□ -1.38
LMBR1-216ENST00000477983 ADGRE4PQ86SQ3 457 aa6.42□□□□□ -1.38
LMBR1-216ENST00000477983 C1orf210Q8IVY1 113 aa6.42□□□□□ -1.38
LMBR1-216ENST00000477983 ZNF808Q8N4W9 903 aaPredicted RBP6.42□□□□□ -1.38
LMBR1-216ENST00000477983 HIPK4Q8NE63 616 aa6.42□□□□□ -1.38
LMBR1-216ENST00000477983 IL17DQ8TAD2 202 aa6.42□□□□□ -1.38
LMBR1-216ENST00000477983 PMFBP1Q8TBY8 1022 aa6.42□□□□□ -1.38
LMBR1-216ENST00000477983 THAP3Q8WTV1 239 aaPredicted RBP6.42□□□□□ -1.38
LMBR1-216ENST00000477983 FOXRED1Q96CU9 486 aaPredicted RBP6.42□□□□□ -1.38
LMBR1-216ENST00000477983 ZNF703Q9H7S9 590 aaPredicted RBP6.42□□□□□ -1.38
LMBR1-216ENST00000477983 SFMBT1Q9UHJ3 866 aa6.42□□□□□ -1.38
LMBR1-216ENST00000477983 ING1Q9UK53 422 aaPredicted RBP6.42□□□□□ -1.38
LMBR1-216ENST00000477983 VWA7Q9Y334 891 aa6.42□□□□□ -1.38
LMBR1-216ENST00000477983 ERCC6Q03468 1493 aa6.41□□□□□ -1.38
LMBR1-216ENST00000477983 PRXQ9BXM0 1461 aa6.41□□□□□ -1.38
LMBR1-216ENST00000477983 MRC2Q9UBG0 1479 aa6.41□□□□□ -1.38
LMBR1-216ENST00000477983 ABCA10Q8WWZ4 1543 aa6.41□□□□□ -1.38
LMBR1-216ENST00000477983 NARSO43776 548 aaKnown RBP6.41□□□□□ -1.38
LMBR1-216ENST00000477983 KRTAP1-1Q07627 177 aa6.41□□□□□ -1.38
LMBR1-216ENST00000477983 IGFL4Q6B9Z1 124 aa6.41□□□□□ -1.38
LMBR1-216ENST00000477983 CC2D1AQ6P1N0 951 aaPredicted RBP6.41□□□□□ -1.38
LMBR1-216ENST00000477983 BRAPQ7Z569 592 aa6.41□□□□□ -1.38
LMBR1-216ENST00000477983 AMER2Q8N7J2 671 aa6.41□□□□□ -1.38
LMBR1-216ENST00000477983 AGO3Q9H9G7 860 aaKnown RBP6.41□□□□□ -1.38
LMBR1-216ENST00000477983 TRIM39Q9HCM9 518 aa6.41□□□□□ -1.38
LMBR1-216ENST00000477983 ERICH3Q5RHP9 1530 aa6.4□□□□□ -1.38
LMBR1-216ENST00000477983 SLC26A4O43511 780 aa6.4□□□□□ -1.38
LMBR1-216ENST00000477983 MSX2P35548 267 aaPredicted RBP6.4□□□□□ -1.38
LMBR1-216ENST00000477983 STAT5BP51692 787 aa6.4□□□□□ -1.38
LMBR1-216ENST00000477983 ALDH6A1Q02252 535 aaKnown RBP6.4□□□□□ -1.38
LMBR1-216ENST00000477983 GRM7Q14831 915 aa6.4□□□□□ -1.38
LMBR1-216ENST00000477983 TMEM132BQ14DG7 1078 aa6.4□□□□□ -1.38
LMBR1-216ENST00000477983 LSM12Q3MHD2 195 aaKnown RBP6.4□□□□□ -1.38
LMBR1-216ENST00000477983 TMEM177Q53S58 311 aa6.4□□□□□ -1.38
LMBR1-216ENST00000477983 C2orf27AQ580R0 203 aa6.4□□□□□ -1.38
LMBR1-216ENST00000477983 FGD2Q7Z6J4 655 aa6.4□□□□□ -1.38
LMBR1-216ENST00000477983 RTN4RL1Q86UN2 441 aaPredicted RBP6.4□□□□□ -1.38
LMBR1-216ENST00000477983 C2orf69Q8N8R5 385 aa6.4□□□□□ -1.38
LMBR1-216ENST00000477983 IGSF22Q8N9C0 903 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms