RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SPATA16Q9BXB7 569 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 ZC3H12CQ9C0D7 883 aaKnown RBP13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 TMBIM4Q9HC24 238 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 INIPQ9NRY2 104 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 FAM217BQ9NTX9 383 aaPredicted RBP13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 FAM205AQ6ZU69 1335 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 A0A0U1RQJ8 604 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 WNT7AO00755 349 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 CETN3O15182 167 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 ALDH2P05091 517 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 CALB2P22676 271 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 GEMIN4P57678 1058 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 NR1I3Q14994 352 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 P3H1Q32P28 736 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 CNPY1Q3B7I2 92 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 CCDC153Q494R4 210 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 MFSD14BQ5SR56 506 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 GRAMD4Q6IC98 578 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 TRPM8Q7Z2W7 1104 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 SLC51AQ86UW1 340 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 PHKBQ93100 1093 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 AGBL1Q96MI9 1066 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 SLC26A6Q9BXS9 759 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 STIM2Q9P246 746 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 SUGT1Q9Y2Z0 365 aa13.7□□□□□ -0.22
RTFDC1-207ENST00000477573 A0A0J9YVX5 310 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 MAGEA13PA6NCF6 341 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 MFAP3LO75121 409 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 ITGA2BP08514 1039 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 SERPINB8P50452 374 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 NCALDP61601 193 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 ITGA7Q13683 1181 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 DIXDC1Q155Q3 683 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 WDR78Q5VTH9 848 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 DAB2IPQ5VWQ8 1189 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 CYP26C1Q6V0L0 522 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 DPP8Q6V1X1 898 aaPredicted RBP13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 C3orf62Q6ZUJ4 267 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 ENAHQ8N8S7 591 aaPredicted RBP13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 KCNG4Q8TDN1 519 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 DNAJC9Q8WXX5 260 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 RAPGEF5Q92565 580 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 CHMP6Q96FZ7 201 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 RNPEPL1Q9HAU8 725 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 ZNF287Q9HBT7 754 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 ARHGEF3Q9NR81 526 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 LTBP1Q14766 1721 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 BTBD19C9JJ37 291 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 PRDM1O75626 825 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 NAT2P11245 290 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 SERPINB4P48594 390 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 ACADVLP49748 655 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 PMS2P54278 862 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 KIF23Q02241 960 aaPredicted RBP13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 SAFBQ15424 915 aaKnown RBP eCLIP13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 C12orf60Q5U649 245 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 OTUD7BQ6GQQ9 843 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 DQX1Q8TE96 717 aaKnown RBP13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 SH3RF3Q8TEJ3 882 aaPredicted RBP13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 SH3TC2Q8TF17 1288 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 ATP6V0A1Q93050 837 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 GFM2Q969S9 779 aaKnown RBP13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 CCDC43Q96MW1 224 aaKnown RBP13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 EYA3Q99504 573 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 RAB17Q9H0T7 212 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 MRPL46Q9H2W6 279 aaKnown RBP13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 CHMP2BQ9UQN3 213 aa13.69□□□□□ -0.22
RTFDC1-207ENST00000477573 A0A1B0GTH6 734 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 F8W031 263 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 G3V3G9 751 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 DDAH1O94760 285 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 DEXIO95424 95 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 GNA14O95837 355 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 S100A1P23297 94 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 KCNJ2P63252 427 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 TMEM259Q4ZIN3 620 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 RASIP1Q5U651 963 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 KRT40Q6A162 431 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 ILDR1Q86SU0 546 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 RNF10Q8N5U6 811 aaKnown RBP13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 SYT2Q8N9I0 419 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 TUBGCP5Q96RT8 1024 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 RTFDC1Q9BY42 306 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 CNOT10Q9H9A5 744 aaKnown RBP13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 POLR3EQ9NVU0 708 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 STK32BQ9NY57 414 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 TSPY2A6NKD2 308 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 EIF4E1BA6NMX2 242 aaKnown RBP13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 H0YIN7 160 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 TTI1O43156 1089 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 NDUFB5O43674 189 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 YEATS4O95619 227 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 POLR3DP05423 398 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 BTDP43251 543 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 GUCY2FP51841 1108 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms