RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ADAM15Q13444 863 aa6.14□□□□□ -1.43
UBR3-209ENST00000477461 GRM7Q14831 915 aa6.14□□□□□ -1.43
UBR3-209ENST00000477461 SF3A1Q15459 793 aaKnown RBP6.14□□□□□ -1.43
UBR3-209ENST00000477461 LSM12Q3MHD2 195 aaKnown RBP6.14□□□□□ -1.43
UBR3-209ENST00000477461 TMEM177Q53S58 311 aa6.14□□□□□ -1.43
UBR3-209ENST00000477461 ZC3H12BQ5HYM0 836 aaKnown RBP6.14□□□□□ -1.43
UBR3-209ENST00000477461 CATSPEREQ5SY80 951 aa6.14□□□□□ -1.43
UBR3-209ENST00000477461 TMEM200BQ69YZ2 307 aa6.14□□□□□ -1.43
UBR3-209ENST00000477461 MAMDC4Q6UXC1 1216 aa6.14□□□□□ -1.43
UBR3-209ENST00000477461 LILRB2Q8N423 598 aa6.14□□□□□ -1.43
UBR3-209ENST00000477461 FAM89AQ96GI7 184 aa6.14□□□□□ -1.43
UBR3-209ENST00000477461 AGO3Q9H9G7 860 aaKnown RBP6.14□□□□□ -1.43
UBR3-209ENST00000477461 TLR9Q9NR96 1032 aa6.14□□□□□ -1.43
UBR3-209ENST00000477461 SLC30A1Q9Y6M5 507 aa6.14□□□□□ -1.43
UBR3-209ENST00000477461 HIP1RO75146 1068 aa6.13□□□□□ -1.43
UBR3-209ENST00000477461 RPS19P39019 145 aaKnown RBP6.13□□□□□ -1.43
UBR3-209ENST00000477461 LRP10Q7Z4F1 713 aa6.13□□□□□ -1.43
UBR3-209ENST00000477461 ZSWIM2Q8NEG5 633 aa6.13□□□□□ -1.43
UBR3-209ENST00000477461 PLEKHG4BQ96PX9 1271 aa6.13□□□□□ -1.43
UBR3-209ENST00000477461 ASB1Q9Y576 335 aa6.13□□□□□ -1.43
UBR3-209ENST00000477461 PTCH2Q9Y6C5 1203 aa6.13□□□□□ -1.43
UBR3-209ENST00000477461 ZBTB48P10074 688 aaPredicted RBP6.12□□□□□ -1.43
UBR3-209ENST00000477461 APEX1P27695 318 aaKnown RBP6.12□□□□□ -1.43
UBR3-209ENST00000477461 ATP2C1P98194 919 aaPredicted RBP6.12□□□□□ -1.43
UBR3-209ENST00000477461 PTH1RQ03431 593 aa6.12□□□□□ -1.43
UBR3-209ENST00000477461 FHL2Q14192 279 aa6.12□□□□□ -1.43
UBR3-209ENST00000477461 TRIM61Q5EBN2 209 aa6.12□□□□□ -1.43
UBR3-209ENST00000477461 MIIPQ5JXC2 388 aa6.12□□□□□ -1.43
UBR3-209ENST00000477461 D2HGDHQ8N465 521 aa6.12□□□□□ -1.43
UBR3-209ENST00000477461 SHCBP1Q8NEM2 672 aa6.12□□□□□ -1.43
UBR3-209ENST00000477461 IL17DQ8TAD2 202 aa6.12□□□□□ -1.43
UBR3-209ENST00000477461 CALML6Q8TD86 181 aa6.12□□□□□ -1.43
UBR3-209ENST00000477461 THAP3Q8WTV1 239 aaPredicted RBP6.12□□□□□ -1.43
UBR3-209ENST00000477461 SREK1Q8WXA9 508 aaKnown RBP6.12□□□□□ -1.43
UBR3-209ENST00000477461 M0R2C6 588 aa6.11□□□□□ -1.43
UBR3-209ENST00000477461 ZNF202O95125 648 aa6.11□□□□□ -1.43
UBR3-209ENST00000477461 SDHAP31040 664 aa6.11□□□□□ -1.43
UBR3-209ENST00000477461 ANTXR2P58335 489 aa6.11□□□□□ -1.43
UBR3-209ENST00000477461 HGFACQ04756 655 aa6.11□□□□□ -1.43
UBR3-209ENST00000477461 BCL6BQ8N143 479 aaPredicted RBP6.11□□□□□ -1.43
UBR3-209ENST00000477461 CLUHP3Q96NS8 147 aa6.11□□□□□ -1.43
UBR3-209ENST00000477461 DNAJC2Q99543 621 aaKnown RBP6.11□□□□□ -1.43
UBR3-209ENST00000477461 MENTQ9BUN1 341 aa6.11□□□□□ -1.43
UBR3-209ENST00000477461 MRPL4Q9BYD3 311 aaKnown RBP6.11□□□□□ -1.43
UBR3-209ENST00000477461 TRIM39Q9HCM9 518 aa6.11□□□□□ -1.43
UBR3-209ENST00000477461 HECAQ9UBI9 543 aaPredicted RBP6.11□□□□□ -1.43
UBR3-209ENST00000477461 SLC26A4O43511 780 aa6.1□□□□□ -1.43
UBR3-209ENST00000477461 NARSO43776 548 aaKnown RBP6.1□□□□□ -1.43
UBR3-209ENST00000477461 RGS3P49796 1198 aa6.1□□□□□ -1.43
UBR3-209ENST00000477461 SLC6A3Q01959 620 aa6.1□□□□□ -1.43
UBR3-209ENST00000477461 HHEXQ03014 270 aa6.1□□□□□ -1.43
UBR3-209ENST00000477461 RTN4RL1Q86UN2 441 aaPredicted RBP6.1□□□□□ -1.43
UBR3-209ENST00000477461 FOXRED1Q96CU9 486 aaPredicted RBP6.1□□□□□ -1.43
UBR3-209ENST00000477461 RPL10LQ96L21 214 aaKnown RBP6.1□□□□□ -1.43
UBR3-209ENST00000477461 NCOA5Q9HCD5 579 aaKnown RBP6.1□□□□□ -1.43
UBR3-209ENST00000477461 SAMD15Q9P1V8 674 aa6.1□□□□□ -1.43
UBR3-209ENST00000477461 RBM8AQ9Y5S9 174 aaKnown RBP6.1□□□□□ -1.43
UBR3-209ENST00000477461 CAPN14A8MX76 684 aa6.09□□□□□ -1.43
UBR3-209ENST00000477461 DVL2O14641 736 aa6.09□□□□□ -1.43
UBR3-209ENST00000477461 KIF11P52732 1056 aa6.09□□□□□ -1.43
UBR3-209ENST00000477461 ALDH6A1Q02252 535 aaKnown RBP6.09□□□□□ -1.43
UBR3-209ENST00000477461 RIN1Q13671 783 aa6.09□□□□□ -1.43
UBR3-209ENST00000477461 SAFB2Q14151 953 aaKnown RBP eCLIP6.09□□□□□ -1.43
UBR3-209ENST00000477461 C2orf27AQ580R0 203 aa6.09□□□□□ -1.43
UBR3-209ENST00000477461 SPTY2D1Q68D10 685 aaPredicted RBP6.09□□□□□ -1.43
UBR3-209ENST00000477461 MKL1Q969V6 931 aa6.09□□□□□ -1.43
UBR3-209ENST00000477461 BOCQ9BWV1 1114 aa6.09□□□□□ -1.43
UBR3-209ENST00000477461 NELFAQ9H3P2 528 aa6.09□□□□□ -1.43
UBR3-209ENST00000477461 SAE1Q9UBE0 346 aaPredicted RBP6.09□□□□□ -1.43
UBR3-209ENST00000477461 CCDC163A0A0D9SF12 145 aa6.08□□□□□ -1.44
UBR3-209ENST00000477461 A0A1W2PRX2 142 aa6.08□□□□□ -1.44
UBR3-209ENST00000477461 GOLGA8BA8MQT2 603 aa6.08□□□□□ -1.44
UBR3-209ENST00000477461 OVOL3O00110 214 aa6.08□□□□□ -1.44
UBR3-209ENST00000477461 GLRX3O76003 335 aaKnown RBP6.08□□□□□ -1.44
UBR3-209ENST00000477461 NPTXRO95502 500 aa6.08□□□□□ -1.44
UBR3-209ENST00000477461 ACRV1P26436 265 aa6.08□□□□□ -1.44
UBR3-209ENST00000477461 ABHD18Q0P651 414 aa6.08□□□□□ -1.44
UBR3-209ENST00000477461 MAP3K12Q12852 859 aa6.08□□□□□ -1.44
UBR3-209ENST00000477461 CRB2Q5IJ48 1285 aa6.08□□□□□ -1.44
UBR3-209ENST00000477461 CC2D1AQ6P1N0 951 aaPredicted RBP6.08□□□□□ -1.44
UBR3-209ENST00000477461 DDX53Q86TM3 631 aaKnown RBP6.08□□□□□ -1.44
UBR3-209ENST00000477461 JMYQ8N9B5 988 aa6.08□□□□□ -1.44
UBR3-209ENST00000477461 SLITRK6Q9H5Y7 841 aa6.08□□□□□ -1.44
UBR3-209ENST00000477461 SH3BP1Q9Y3L3 701 aa6.08□□□□□ -1.44
UBR3-209ENST00000477461 KCNQ2O43526 872 aa6.07□□□□□ -1.44
UBR3-209ENST00000477461 OPA1O60313 960 aa6.07□□□□□ -1.44
UBR3-209ENST00000477461 TGFB2P61812 414 aa6.07□□□□□ -1.44
UBR3-209ENST00000477461 ZNF460Q14592 562 aa6.07□□□□□ -1.44
UBR3-209ENST00000477461 BMS1Q14692 1282 aaKnown RBP6.07□□□□□ -1.44
UBR3-209ENST00000477461 SOGA3Q5TF21 947 aa6.07□□□□□ -1.44
UBR3-209ENST00000477461 NEU4Q8WWR8 484 aaPredicted RBP6.07□□□□□ -1.44
UBR3-209ENST00000477461 DRC1Q96MC2 740 aa6.07□□□□□ -1.44
UBR3-209ENST00000477461 DENND2AQ9ULE3 1009 aa6.07□□□□□ -1.44
UBR3-209ENST00000477461 CTDP1Q9Y5B0 961 aaPredicted RBP6.07□□□□□ -1.44
UBR3-209ENST00000477461 TNPO3Q9Y5L0 923 aaKnown RBP6.07□□□□□ -1.44
UBR3-209ENST00000477461 BAZ1AQ9NRL2 1556 aaPredicted RBP6.06□□□□□ -1.44
UBR3-209ENST00000477461 PTPDC1A2A3K4 754 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 C2orf78A6NCI8 922 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 PLD2O14939 933 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 MECP2P51608 486 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms