RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 LYPLA2O95372 231 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 CD52P31358 61 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 PRPHP41219 470 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 RABGGTBP53611 331 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 WDR5P61964 334 aaKnown RBP10.84□□□□□ -0.67
HDAC3-208ENST00000476739 PDIA5Q14554 519 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 PTPAQ15257 358 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 KIZQ2M2Z5 673 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 TMEM266Q2M3C6 531 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 XKR9Q5GH70 373 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 IER5Q5VY09 327 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 DTHD1Q6ZMT9 781 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.84□□□□□ -0.67
HDAC3-208ENST00000476739 NME8Q8N427 588 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 NEK9Q8TD19 979 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 OSMRQ99650 979 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 MMTAG2Q9BU76 263 aaKnown RBP10.84□□□□□ -0.67
HDAC3-208ENST00000476739 POLR3CQ9BUI4 534 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-208ENST00000476739 IFIH1Q9BYX4 1025 aaKnown RBP10.84□□□□□ -0.67
HDAC3-208ENST00000476739 ADAMTS10Q9H324 1103 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 LRWD1Q9UFC0 647 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 AKT3Q9Y243 479 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 KDM3AQ9Y4C1 1321 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.83□□□□□ -0.68
HDAC3-208ENST00000476739 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.83□□□□□ -0.68
HDAC3-208ENST00000476739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.83□□□□□ -0.68
HDAC3-208ENST00000476739 VWA3AA6NCI4 1184 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 M0QZ92 97 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 ACTN1P12814 892 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 MYOGP15173 224 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 RPA1P27694 616 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 RARRES1P49788 294 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 NLRP11P59045 1033 aaKnown RBP10.83□□□□□ -0.68
HDAC3-208ENST00000476739 CEBPZQ03701 1054 aaKnown RBP10.83□□□□□ -0.68
HDAC3-208ENST00000476739 TSHZ1Q6ZSZ6 1077 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 Q7L0L9 218 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 OTUD6AQ7L8S5 288 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 KSR1Q8IVT5 923 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 SEPT8Q92599 483 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 TMEM143Q96AN5 459 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 USP28Q96RU2 1077 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 PBX4Q9BYU1 374 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 DHX33Q9H6R0 707 aaKnown RBP10.83□□□□□ -0.68
HDAC3-208ENST00000476739 TUFT1Q9NNX1 390 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 XPNPEP1Q9NQW7 623 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 NOC2LQ9Y3T9 749 aaKnown RBP10.83□□□□□ -0.68
HDAC3-208ENST00000476739 SLC4A7Q9Y6M7 1214 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 MYH15Q9Y2K3 1946 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 SZT2Q5T011 3432 aa10.83□□□□□ -0.68
HDAC3-208ENST00000476739 ABHD14A-ACY1A0A1B0GW23 586 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 CSDE1O75534 798 aaKnown RBP10.82□□□□□ -0.68
HDAC3-208ENST00000476739 BAIAP3O94812 1187 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 RPLP2P05387 115 aaKnown RBP10.82□□□□□ -0.68
HDAC3-208ENST00000476739 ATP2A2P16615 1042 aaKnown RBP10.82□□□□□ -0.68
HDAC3-208ENST00000476739 TMOD1P28289 359 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 CCT6AP40227 531 aaKnown RBP10.82□□□□□ -0.68
HDAC3-208ENST00000476739 GPC3P51654 580 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 POLGP54098 1239 aaPredicted RBP10.82□□□□□ -0.68
HDAC3-208ENST00000476739 SMAD3P84022 425 aaKnown RBP10.82□□□□□ -0.68
HDAC3-208ENST00000476739 IKBKEQ14164 716 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 EMC2Q15006 297 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 ARL6IP4Q66PJ3 421 aaKnown RBP10.82□□□□□ -0.68
HDAC3-208ENST00000476739 RTN4RL1Q86UN2 441 aaPredicted RBP10.82□□□□□ -0.68
HDAC3-208ENST00000476739 FAM228AQ86W67 206 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 ERMNQ8TAM6 284 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 SNX29Q8TEQ0 813 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 LINC01599Q8WXQ3 324 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 MAP7D2Q96T17 732 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 MTIF3Q9H2K0 278 aaKnown RBP10.82□□□□□ -0.68
HDAC3-208ENST00000476739 TMX1Q9H3N1 280 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 ZSCAN16Q9H4T2 348 aaPredicted RBP10.82□□□□□ -0.68
HDAC3-208ENST00000476739 ANKEF1Q9NU02 776 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 SUCLA2Q9P2R7 463 aaPredicted RBP10.82□□□□□ -0.68
HDAC3-208ENST00000476739 PADI3Q9ULW8 664 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 KIAA1024Q9UPX6 916 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 YBX2Q9Y2T7 364 aaKnown RBP10.82□□□□□ -0.68
HDAC3-208ENST00000476739 ZDHHC9Q9Y397 364 aa10.82□□□□□ -0.68
HDAC3-208ENST00000476739 A0A087WZ62 844 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 E9PMD0 336 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 ENPP3O14638 875 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 MGEA5O60502 916 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 USO1O60763 962 aaKnown RBP10.81□□□□□ -0.68
HDAC3-208ENST00000476739 F13A1P00488 732 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 ZSCAN22P10073 491 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-208ENST00000476739 FGFR4P22455 802 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 MARCKSP29966 332 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-208ENST00000476739 RFC5P40937 340 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 CRYBB1P53674 252 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-208ENST00000476739 NFX1Q12986 1120 aaKnown RBP10.81□□□□□ -0.68
HDAC3-208ENST00000476739 FOXD4L6Q3SYB3 417 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-208ENST00000476739 HAUS3Q68CZ6 603 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 FAM117BQ6P1L5 589 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 FOXD4L3Q6VB84 417 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-208ENST00000476739 KCNK18Q7Z418 384 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 RHPN2Q8IUC4 686 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 LRRC15Q8TF66 581 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 SLC7A3Q8WY07 619 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 CHAMP1Q96JM3 812 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 PNMA5Q96PV4 448 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 NACC1Q96RE7 527 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms