RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 POMKQ9H5K3 350 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 RIC8AQ9NPQ8 531 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 ENTPD7Q9NQZ7 604 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 ZNF302Q9NR11 478 aa13.64□□□□□ -0.23
HDAC6-219ENST00000476625 MYO10Q9HD67 2058 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 IGLV3-22A0A075B6J6 115 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 C2CD4DB7Z1M9 353 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 NT5C1B-RDH14C9J2C7 533 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 MEIS1O00470 390 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 CSDE1O75534 798 aaKnown RBP13.63□□□□□ -0.23
HDAC6-219ENST00000476625 BRD1O95696 1058 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 ASGR2P07307 311 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 ATF7P17544 494 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-219ENST00000476625 CLK2P49760 499 aaKnown RBP13.63□□□□□ -0.23
HDAC6-219ENST00000476625 ADCY7P51828 1080 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 CLLU1OSQ5K130 101 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 SLC24A5Q71RS6 500 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 ZBTB33Q86T24 672 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 NME8Q8N427 588 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 METTL13Q8N6R0 699 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 TMEM105Q8N8V8 129 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 MRPS27Q92552 414 aaKnown RBP13.63□□□□□ -0.23
HDAC6-219ENST00000476625 ATOH1Q92858 354 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-219ENST00000476625 GJA10Q969M2 543 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 TMEM87BQ96K49 555 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 ATP6V0A4Q9HBG4 840 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 PIEZO1Q92508 2521 aa13.63□□□□□ -0.23
HDAC6-219ENST00000476625 SMCO2A6NFE2 343 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 MAFGO15525 162 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 HBP1O60381 514 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 CDC27P30260 824 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 CA8P35219 290 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 ZNF76P36508 570 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 SREBF1P36956 1147 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 LIFRP42702 1097 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 UBE3AQ05086 875 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 LONRF3Q496Y0 759 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 APOA5Q6Q788 366 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 KCNT2Q6UVM3 1135 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 ASCL5Q7RTU5 278 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 TMEM173Q86WV6 379 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-219ENST00000476625 PLA2G4DQ86XP0 818 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 CKAP2LQ8IYA6 745 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 KREMEN2Q8NCW0 462 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 C1orf112Q9NSG2 853 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 FAM217BQ9NTX9 383 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-219ENST00000476625 TMEM161AQ9NX61 479 aa13.62□□□□□ -0.23
HDAC6-219ENST00000476625 V9GY48 417 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-219ENST00000476625 COL1A2P08123 1366 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 CALM1P0DP23 149 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 CALM2P0DP24 149 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 CALM3P0DP25 149 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 CPA1P15085 419 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 LAG3P18627 525 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 METAP2P50579 478 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDAC6-219ENST00000476625 NLRP11P59045 1033 aaKnown RBP13.61□□□□□ -0.23
HDAC6-219ENST00000476625 FAM189BP81408 668 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 NECTIN1Q15223 517 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 UGCGQ16739 394 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 ADCK5Q3MIX3 580 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 FAM160B1Q5W0V3 765 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 RASGRP4Q8TDF6 673 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 HELQQ8TDG4 1101 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 RIPOR3Q96MK2 946 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 AAASQ9NRG9 546 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 GABBR1Q9UBS5 961 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 HCFC2Q9Y5Z7 792 aa13.61□□□□□ -0.23
HDAC6-219ENST00000476625 MYO15AQ9UKN7 3530 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 TMEM150BA6NC51 233 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 MEIS3P2A8K0S8 358 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 GPR182O15218 404 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 ST18O60284 1047 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 CLASP2O75122 1294 aaKnown RBP13.6□□□□□ -0.23
HDAC6-219ENST00000476625 RPLP2P05387 115 aaKnown RBP13.6□□□□□ -0.23
HDAC6-219ENST00000476625 CRYBB1P53674 252 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-219ENST00000476625 PLCB3Q01970 1234 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 DRP2Q13474 957 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 RTN1Q16799 776 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 ZNF484Q5JVG2 852 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 RARS2Q5T160 578 aaKnown RBP13.6□□□□□ -0.23
HDAC6-219ENST00000476625 TMEM184AQ6ZMB5 413 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 TMC7Q7Z402 723 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 ECHDC2Q86YB7 292 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 LINC01465Q8N7H1 131 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 BCL7CQ8WUZ0 217 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-219ENST00000476625 SH2D3AQ9BRG2 576 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 ESYT1Q9BSJ8 1104 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 TMEM117Q9H0C3 514 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 ANO2Q9NQ90 1003 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 AKT3Q9Y243 479 aa13.6□□□□□ -0.23
HDAC6-219ENST00000476625 C2orf71A6NGG8 1288 aa13.59□□□□□ -0.23
HDAC6-219ENST00000476625 GOLGA8AA7E2F4 631 aa13.59□□□□□ -0.23
HDAC6-219ENST00000476625 GOLGA8BA8MQT2 603 aa13.59□□□□□ -0.23
HDAC6-219ENST00000476625 IPO5O00410 1097 aaKnown RBP13.59□□□□□ -0.23
HDAC6-219ENST00000476625 EDIL3O43854 480 aa13.59□□□□□ -0.23
HDAC6-219ENST00000476625 ZNF862O60290 1169 aa13.59□□□□□ -0.23
HDAC6-219ENST00000476625 B4GALT3O60512 393 aa13.59□□□□□ -0.23
HDAC6-219ENST00000476625 EPCAMP16422 314 aa13.59□□□□□ -0.23
HDAC6-219ENST00000476625 EFCAB12Q6NXP0 572 aa13.59□□□□□ -0.23
HDAC6-219ENST00000476625 MIS18BP1Q6P0N0 1132 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms